NAU_TM00575, NAU_TM00575 (genetic_marker) Gossypium hirsutum

Marker Overview
NameNAU_TM00575
dbSNP IDN/A
SNP Array ID
NAU_CottonSNP80K:NAU_TM00575
TypeSNP
SNP AllelesA/G
5' Flanking SequenceGTTGGCATCGATTTGAGATTTACATGTAAGACCATGTCTGGAACATTGGCATCATATATG
3' Flanking SequenceTTTTGTGTAAGACACTGTCTGGGATAGTGGTATCGATAATTGATTACATGTAAGACCTCG
SpeciesGossypium hirsutum
Publication[view all]
ContactGuo, Wang-Zhen
Contact
NameDetails
Guo, Wang-Zhen
First name:Wang-Zhen
Last name:Guo
Institution:Nanjing Agri Univ
Address:Weigang No.1, Nanjing, Jiangsu Prov 210095
Country:China
Email:moelab@njau.edu.cn
Phone:+086 25 84395311
Fax:+086 25 84395307
Keywords:Cotton Genomics
Last update:20-Sep-2011
Libraries
Library NameType
NAU_CottonSNP80KSNP_chip
Alignments
The following features are aligned
Feature Name Type LocationAnalysisReference
CM018202.1chromosomeCM018202.1:10101525..10101645 +Gossypium barbadense (AD2) '3-79' genome HGS_v1.1n/a
Chr01_CRI-A2_v1.0.a1chromosomeChr01_CRI-A2_v1.0.a1:11605777..11605897 +Gossypium arboreum (A2) 'SXY1' genome CRI-updated_v1n/a
At_chr2chromosomeAt_chr2:10500000..10500120 +Gossypium hirsutum (AD1) 'TM-1' genome CGP-BGI_v1n/a
A01chromosomeA01:9841688..9841808 +Gossypium hirsutum (AD1) 'TM-1' genome NAU-NBI_v1.1n/a
Ghir_A01chromosomeGhir_A01:10293491..10293611 +Gossypium hirsutum (AD1) 'TM-1' genome HAU_v1 / v1.1n/a
A01chromosomeA01:9796730..9796850 +Gossypium hirsutum (AD1) 'TM-1' genome ZJU-improved_v2.1_a1n/a
A01chromosomeA01:10415842..10415962 +Gossypium hirsutum (AD1) 'TM-1' genome CRI_v1n/a
A01chromosomeA01:10236711..10236831 +Gossypium hirsutum (AD1) 'ZM24' genome CRI_v1n/a
Gbar_A01chromosomeGbar_A01:10186394..10186514 +Gossypium barbadense (AD2) '3-79' genome HAU_v2_a1n/a
A01chromosomeA01:9802698..9802818 +Gossypium barbadense (AD2) 'H7124' genome ZJU_v1.1_a1n/a
CM017610.1chromosomeCM017610.1:11229004..11229124 +Gossypium tomentosum (AD3) genome HGS_v1.1n/a
CM017688.1chromosomeCM017688.1:10379274..10379394 +Gossypium darwinii (AD5) genome HGS_v1.1n/a
A01chromosomeA01:10427691..10427811 +Gossypium hirsutum (AD1) 'TM-1' genome UTX_v2.1n/a
Chr01chromosomeChr01:10499634..10499754 +Gossypium herbaceum (A1) 'Mutema' genome WHU_v1n/a
Chr01chromosomeChr01:11446788..11446908 +Gossypium arboreum (A2) 'SXY1' genome WHU-updated v1n/a
Map Positions
#Map NameLinkage GroupBinPositionLocusMapViewer
1Yumian-1 x Acala Maxxa, RIL (2018)AD_ch01_At.01N/A57.3TM575View
2LMY28 x XLZ24, RIL (2018)AD_ch01_At.01N/A41.88TM575View
Sequence
>NAU_TM00575 ID=NAU_TM00575; Name=NAU_TM00575; organism=Gossypium hirsutum; type=genetic_marker; length=125bp
GTTGGCATCGATTTGAGATTTACATGTAAGACCATGTCTGGAACATTGGC
ATCATATATG[A/G]TTTTGTGTAAGACACTGTCTGGGATAGTGGTATCG
ATAATTGATTACATGTAAGACCTCG