NAU_TM00503, NAU_TM00503 (genetic_marker) Gossypium hirsutum

Marker Overview
NameNAU_TM00503
dbSNP IDN/A
SNP Array ID
NAU_CottonSNP80K:NAU_TM00503
TypeSNP
SNP AllelesT/C
5' Flanking SequenceCAACCCGTATAATCCTATACAGATTCAACTTGTGCGGCAAGATCCATACCACAGGGGCTT
3' Flanking SequenceTCCCCCGTACCCCGGTTGAGTTTAGTGGTCTCTATTTTATTTCTTTAACAAGTGAGTTGT
SpeciesGossypium hirsutum
Publication[view all]
ContactGuo, Wang-Zhen
Contact
NameDetails
Guo, Wang-Zhen
First name:Wang-Zhen
Last name:Guo
Institution:Nanjing Agri Univ
Address:Weigang No.1, Nanjing, Jiangsu Prov 210095
Country:China
Email:moelab@njau.edu.cn
Phone:+086 25 84395311
Fax:+086 25 84395307
Keywords:Cotton Genomics
Last update:20-Sep-2011
Libraries
Library NameType
NAU_CottonSNP80KSNP_chip
Alignments
The following features are aligned
Feature Name Type LocationAnalysisReference
CM018202.1chromosomeCM018202.1:9502787..9502907 +Gossypium barbadense (AD2) '3-79' genome HGS_v1.1n/a
Chr01_CRI-A2_v1.0.a1chromosomeChr01_CRI-A2_v1.0.a1:10824602..10824722 +Gossypium arboreum (A2) 'SXY1' genome CRI-updated_v1n/a
At_chr2chromosomeAt_chr2:9783022..9783142 +Gossypium hirsutum (AD1) 'TM-1' genome CGP-BGI_v1n/a
A01chromosomeA01:9115022..9115142 +Gossypium hirsutum (AD1) 'TM-1' genome NAU-NBI_v1.1n/a
Ghir_A01chromosomeGhir_A01:9544995..9545115 +Gossypium hirsutum (AD1) 'TM-1' genome HAU_v1 / v1.1n/a
A01chromosomeA01:9107679..9107799 +Gossypium hirsutum (AD1) 'TM-1' genome ZJU-improved_v2.1_a1n/a
A01chromosomeA01:9686333..9686453 +Gossypium hirsutum (AD1) 'TM-1' genome CRI_v1n/a
A01chromosomeA01:9514077..9514197 +Gossypium hirsutum (AD1) 'ZM24' genome CRI_v1n/a
Gbar_A01chromosomeGbar_A01:9540140..9540260 +Gossypium barbadense (AD2) '3-79' genome HAU_v2_a1n/a
A01chromosomeA01:9170722..9170842 +Gossypium barbadense (AD2) 'H7124' genome ZJU_v1.1_a1n/a
CM017636.1chromosomeCM017636.1:9764959..9765079 +Gossypium mustelinum (AD4) genome JGI_v1.1n/a
CM017688.1chromosomeCM017688.1:9702876..9702996 +Gossypium darwinii (AD5) genome HGS_v1.1n/a
A01chromosomeA01:9697267..9697387 +Gossypium hirsutum (AD1) 'TM-1' genome UTX_v2.1n/a
Chr01chromosomeChr01:9781979..9782099 +Gossypium herbaceum (A1) 'Mutema' genome WHU_v1n/a
Chr01chromosomeChr01:10665088..10665208 +Gossypium arboreum (A2) 'SXY1' genome WHU-updated v1n/a
Map Positions
#Map NameLinkage GroupBinPositionLocusMapViewer
1LMY28 x XLZ24, RIL (2018)AD_ch01_At.01N/A35.75TM503View
Sequence
>NAU_TM00503 ID=NAU_TM00503; Name=NAU_TM00503; organism=Gossypium hirsutum; type=genetic_marker; length=125bp
CAACCCGTATAATCCTATACAGATTCAACTTGTGCGGCAAGATCCATACC
ACAGGGGCTT[C/T]TCCCCCGTACCCCGGTTGAGTTTAGTGGTCTCTAT
TTTATTTCTTTAACAAGTGAGTTGT