NAU_TM00444, NAU_TM00444 (genetic_marker) Gossypium hirsutum

Marker Overview
NameNAU_TM00444
dbSNP IDN/A
SNP Array ID
NAU_CottonSNP80K:NAU_TM00444
TypeSNP
SNP AllelesC/T
5' Flanking SequenceCTTTTCTGAATTGGACACAACTTAGGCTCGGCAGGGACAAGCCCGTGGCACACGCTCGTG
3' Flanking SequenceTCGATTACTTCAGGCCGTGTTCAAGCCTGCCGAATTGACACAGCCATGTAGTCTGCCTGT
SpeciesGossypium hirsutum
Publication[view all]
ContactGuo, Wang-Zhen
Contact
NameDetails
Guo, Wang-Zhen
First name:Wang-Zhen
Last name:Guo
Institution:Nanjing Agri Univ
Address:Weigang No.1, Nanjing, Jiangsu Prov 210095
Country:China
Email:moelab@njau.edu.cn
Phone:+086 25 84395311
Fax:+086 25 84395307
Keywords:Cotton Genomics
Last update:20-Sep-2011
Libraries
Library NameType
NAU_CottonSNP80KSNP_chip
Alignments
The following features are aligned
Feature Name Type LocationAnalysisReference
CM018202.1chromosomeCM018202.1:9070636..9070756 +Gossypium barbadense (AD2) '3-79' genome HGS_v1.1n/a
Chr01_CRI-A2_v1.0.a1chromosomeChr01_CRI-A2_v1.0.a1:10384339..10384459 +Gossypium arboreum (A2) 'SXY1' genome CRI-updated_v1n/a
At_chr2chromosomeAt_chr2:9362401..9362521 +Gossypium hirsutum (AD1) 'TM-1' genome CGP-BGI_v1n/a
A01chromosomeA01:8698366..8698486 +Gossypium hirsutum (AD1) 'TM-1' genome NAU-NBI_v1.1n/a
Ghir_A01chromosomeGhir_A01:9125707..9125827 +Gossypium hirsutum (AD1) 'TM-1' genome HAU_v1 / v1.1n/a
A01chromosomeA01:8708150..8708270 +Gossypium hirsutum (AD1) 'TM-1' genome ZJU-improved_v2.1_a1n/a
A01chromosomeA01:9266686..9266806 +Gossypium hirsutum (AD1) 'TM-1' genome CRI_v1n/a
A01chromosomeA01:9094327..9094447 +Gossypium hirsutum (AD1) 'ZM24' genome CRI_v1n/a
Gbar_A01chromosomeGbar_A01:9108219..9108339 +Gossypium barbadense (AD2) '3-79' genome HAU_v2_a1n/a
A01chromosomeA01:8741055..8741175 +Gossypium barbadense (AD2) 'H7124' genome ZJU_v1.1_a1n/a
CM017610.1chromosomeCM017610.1:10091389..10091509 +Gossypium tomentosum (AD3) genome HGS_v1.1n/a
CM017688.1chromosomeCM017688.1:9263985..9264105 +Gossypium darwinii (AD5) genome HGS_v1.1n/a
A01chromosomeA01:9277593..9277713 +Gossypium hirsutum (AD1) 'TM-1' genome UTX_v2.1n/a
Chr01chromosomeChr01:9313029..9313149 +Gossypium herbaceum (A1) 'Mutema' genome WHU_v1n/a
Chr01chromosomeChr01:10218410..10218530 +Gossypium arboreum (A2) 'SXY1' genome WHU-updated v1n/a
Sequence
>NAU_TM00444 ID=NAU_TM00444; Name=NAU_TM00444; organism=Gossypium hirsutum; type=genetic_marker; length=125bp
CTTTTCTGAATTGGACACAACTTAGGCTCGGCAGGGACAAGCCCGTGGCA
CACGCTCGTG[C/T]TCGATTACTTCAGGCCGTGTTCAAGCCTGCCGAAT
TGACACAGCCATGTAGTCTGCCTGT