NAU_TM00434, NAU_TM00434 (genetic_marker) Gossypium hirsutum

Marker Overview
NameNAU_TM00434
dbSNP IDN/A
SNP Array ID
NAU_CottonSNP80K:NAU_TM00434
TypeSNP
SNP AllelesG/A
5' Flanking SequenceCTGGGCTAAATCCATTTTACACGTATTCTTCGGGAGGGCTGTATCAGAATAGGATCACCC
3' Flanking SequenceTCCAGGCTAGATCTTTTTTACCGTCAATTCCTTTTCAGAGATCCACCGAATTTTCCTTTC
SpeciesGossypium hirsutum
Publication[view all]
ContactGuo, Wang-Zhen
Contact
NameDetails
Guo, Wang-Zhen
First name:Wang-Zhen
Last name:Guo
Institution:Nanjing Agri Univ
Address:Weigang No.1, Nanjing, Jiangsu Prov 210095
Country:China
Email:moelab@njau.edu.cn
Phone:+086 25 84395311
Fax:+086 25 84395307
Keywords:Cotton Genomics
Last update:20-Sep-2011
Libraries
Library NameType
NAU_CottonSNP80KSNP_chip
Alignments
The following features are aligned
Feature Name Type LocationAnalysisReference
At_chr2chromosomeAt_chr2:9092365..9092485 +Gossypium hirsutum (AD1) 'TM-1' genome CGP-BGI_v1n/a
At_chr11chromosomeAt_chr11:31281486..31281604 -Gossypium hirsutum (AD1) 'TM-1' genome CGP-BGI_v1n/a
A01chromosomeA01:8611232..8611352 +Gossypium hirsutum (AD1) 'TM-1' genome NAU-NBI_v1.1n/a
Ghir_A01chromosomeGhir_A01:9014191..9014311 +Gossypium hirsutum (AD1) 'TM-1' genome HAU_v1 / v1.1n/a
A12chromosomeA12:99987070..99987188 +Gossypium hirsutum (AD1) 'TM-1' genome ZJU-improved_v2.1_a1n/a
A10chromosomeA10:77024914..77025032 +Gossypium hirsutum (AD1) 'TM-1' genome ZJU-improved_v2.1_a1n/a
A01chromosomeA01:8628450..8628570 +Gossypium hirsutum (AD1) 'TM-1' genome ZJU-improved_v2.1_a1n/a
A10chromosomeA10:75435326..75435444 +Gossypium hirsutum (AD1) 'TM-1' genome CRI_v1n/a
A01chromosomeA01:9170350..9170470 +Gossypium hirsutum (AD1) 'TM-1' genome CRI_v1n/a
A10chromosomeA10:70929879..70929997 +Gossypium hirsutum (AD1) 'ZM24' genome CRI_v1n/a
A01chromosomeA01:8983550..8983670 +Gossypium hirsutum (AD1) 'ZM24' genome CRI_v1n/a
CM017610.1chromosomeCM017610.1:10007554..10007674 +Gossypium tomentosum (AD3) genome HGS_v1.1n/a
CM017645.1chromosomeCM017645.1:78813818..78813936 +Gossypium mustelinum (AD4) genome JGI_v1.1n/a
CM017636.1chromosomeCM017636.1:9272088..9272208 +Gossypium mustelinum (AD4) genome JGI_v1.1n/a
CM017688.1chromosomeCM017688.1:9203422..9203542 +Gossypium darwinii (AD5) genome HGS_v1.1n/a
A10chromosomeA10:78365002..78365120 +Gossypium hirsutum (AD1) 'TM-1' genome UTX_v2.1n/a
A01chromosomeA01:9181233..9181353 +Gossypium hirsutum (AD1) 'TM-1' genome UTX_v2.1n/a
Sequence
>NAU_TM00434 ID=NAU_TM00434; Name=NAU_TM00434; organism=Gossypium hirsutum; type=genetic_marker; length=125bp
CTGGGCTAAATCCATTTTACACGTATTCTTCGGGAGGGCTGTATCAGAAT
AGGATCACCC[A/G]TCCAGGCTAGATCTTTTTTACCGTCAATTCCTTTT
CAGAGATCCACCGAATTTTCCTTTC