NAU_TM00403, NAU_TM00403 (genetic_marker) Gossypium hirsutum

Marker Overview
NameNAU_TM00403
dbSNP IDN/A
SNP Array ID
NAU_CottonSNP80K:NAU_TM00403
TypeSNP
SNP AllelesC/G
5' Flanking SequenceCCCAACTATTACACACTCCACACTGCTACTCATCTCCATTTTTTTTTATTACAAAAATTG
3' Flanking SequenceCAAATATCACTACATATAGGTAAGAAGATCGTTTGTAACATTGAGCTTAGGTTATTGGAT
SpeciesGossypium hirsutum
Publication[view all]
ContactGuo, Wang-Zhen
Contact
NameDetails
Guo, Wang-Zhen
First name:Wang-Zhen
Last name:Guo
Institution:Nanjing Agri Univ
Address:Weigang No.1, Nanjing, Jiangsu Prov 210095
Country:China
Email:moelab@njau.edu.cn
Phone:+086 25 84395311
Fax:+086 25 84395307
Keywords:Cotton Genomics
Last update:20-Sep-2011
Libraries
Library NameType
NAU_CottonSNP80KSNP_chip
Alignments
The following features are aligned
Feature Name Type LocationAnalysisReference
CM018202.1chromosomeCM018202.1:8356151..8356270 +Gossypium barbadense (AD2) '3-79' genome HGS_v1.1n/a
Chr01_CRI-A2_v1.0.a1chromosomeChr01_CRI-A2_v1.0.a1:9571984..9572103 +Gossypium arboreum (A2) 'SXY1' genome CRI-updated_v1n/a
A01chromosomeA01:7966230..7966350 +Gossypium hirsutum (AD1) 'TM-1' genome NAU-NBI_v1.1n/a
Ghir_A01chromosomeGhir_A01:8369173..8369293 +Gossypium hirsutum (AD1) 'TM-1' genome HAU_v1 / v1.1n/a
A01chromosomeA01:8029895..8030015 +Gossypium hirsutum (AD1) 'TM-1' genome ZJU-improved_v2.1_a1n/a
A01chromosomeA01:8524786..8524906 +Gossypium hirsutum (AD1) 'TM-1' genome CRI_v1n/a
A01chromosomeA01:8337817..8337937 +Gossypium hirsutum (AD1) 'ZM24' genome CRI_v1n/a
Gbar_A01chromosomeGbar_A01:8393809..8393928 +Gossypium barbadense (AD2) '3-79' genome HAU_v2_a1n/a
A01chromosomeA01:8051264..8051383 +Gossypium barbadense (AD2) 'H7124' genome ZJU_v1.1_a1n/a
CM017610.1chromosomeCM017610.1:9378451..9378571 +Gossypium tomentosum (AD3) genome HGS_v1.1n/a
CM017636.1chromosomeCM017636.1:8546192..8546311 +Gossypium mustelinum (AD4) genome JGI_v1.1n/a
CM017688.1chromosomeCM017688.1:8551247..8551366 +Gossypium darwinii (AD5) genome HGS_v1.1n/a
A01chromosomeA01:8533674..8533794 +Gossypium hirsutum (AD1) 'TM-1' genome UTX_v2.1n/a
Chr01chromosomeChr01:8509877..8509996 +Gossypium herbaceum (A1) 'Mutema' genome WHU_v1n/a
Chr01chromosomeChr01:9382199..9382318 +Gossypium arboreum (A2) 'SXY1' genome WHU-updated v1n/a
Sequence
>NAU_TM00403 ID=NAU_TM00403; Name=NAU_TM00403; organism=Gossypium hirsutum; type=genetic_marker; length=125bp
CCCAACTATTACACACTCCACACTGCTACTCATCTCCATTTTTTTTTATT
ACAAAAATTG[C/G]CAAATATCACTACATATAGGTAAGAAGATCGTTTG
TAACATTGAGCTTAGGTTATTGGAT