NAU_TM00365, NAU_TM00365 (genetic_marker) Gossypium hirsutum

Marker Overview
NameNAU_TM00365
dbSNP IDN/A
SNP Array ID
NAU_CottonSNP80K:NAU_TM00365
TypeSNP
SNP AllelesA/G
5' Flanking SequenceAATGGTGTATACCCATAGAAGTTGATGGCACCTTGTATGGTTAAAAGCATTACTGAATCT
3' Flanking SequenceGATTCTAAAAACTACATTGCAAAACATCCTAATTGCATCTCCATCTTGTTGTATTCATTA
SpeciesGossypium hirsutum
Publication[view all]
ContactGuo, Wang-Zhen
Contact
NameDetails
Guo, Wang-Zhen
First name:Wang-Zhen
Last name:Guo
Institution:Nanjing Agri Univ
Address:Weigang No.1, Nanjing, Jiangsu Prov 210095
Country:China
Email:moelab@njau.edu.cn
Phone:+086 25 84395311
Fax:+086 25 84395307
Keywords:Cotton Genomics
Last update:20-Sep-2011
Libraries
Library NameType
NAU_CottonSNP80KSNP_chip
Alignments
The following features are aligned
Feature Name Type LocationAnalysisReference
CM018202.1chromosomeCM018202.1:113142701..113142821 -Gossypium barbadense (AD2) '3-79' genome HGS_v1.1n/a
Chr01_CRI-A2_v1.0.a1chromosomeChr01_CRI-A2_v1.0.a1:8691939..8692059 +Gossypium arboreum (A2) 'SXY1' genome CRI-updated_v1n/a
At_chr2chromosomeAt_chr2:8056128..8056248 +Gossypium hirsutum (AD1) 'TM-1' genome CGP-BGI_v1n/a
A01chromosomeA01:7321854..7321974 +Gossypium hirsutum (AD1) 'TM-1' genome NAU-NBI_v1.1n/a
Ghir_A01chromosomeGhir_A01:7637933..7638053 +Gossypium hirsutum (AD1) 'TM-1' genome HAU_v1 / v1.1n/a
A01chromosomeA01:7388181..7388301 +Gossypium hirsutum (AD1) 'TM-1' genome ZJU-improved_v2.1_a1n/a
A01chromosomeA01:7793043..7793163 +Gossypium hirsutum (AD1) 'TM-1' genome CRI_v1n/a
A01chromosomeA01:7605835..7605955 +Gossypium hirsutum (AD1) 'ZM24' genome CRI_v1n/a
Gbar_A01chromosomeGbar_A01:7663487..7663607 +Gossypium barbadense (AD2) '3-79' genome HAU_v2_a1n/a
A01chromosomeA01:7387423..7387543 +Gossypium barbadense (AD2) 'H7124' genome ZJU_v1.1_a1n/a
CM017610.1chromosomeCM017610.1:8634560..8634680 +Gossypium tomentosum (AD3) genome HGS_v1.1n/a
CM017636.1chromosomeCM017636.1:7776496..7776616 +Gossypium mustelinum (AD4) genome JGI_v1.1n/a
CM017688.1chromosomeCM017688.1:7814330..7814450 +Gossypium darwinii (AD5) genome HGS_v1.1n/a
A01chromosomeA01:7801755..7801875 +Gossypium hirsutum (AD1) 'TM-1' genome UTX_v2.1n/a
Chr01chromosomeChr01:7770224..7770344 +Gossypium herbaceum (A1) 'Mutema' genome WHU_v1n/a
Chr01chromosomeChr01:8500202..8500322 +Gossypium arboreum (A2) 'SXY1' genome WHU-updated v1n/a
Sequence
>NAU_TM00365 ID=NAU_TM00365; Name=NAU_TM00365; organism=Gossypium hirsutum; type=genetic_marker; length=125bp
AATGGTGTATACCCATAGAAGTTGATGGCACCTTGTATGGTTAAAAGCAT
TACTGAATCT[A/G]GATTCTAAAAACTACATTGCAAAACATCCTAATTG
CATCTCCATCTTGTTGTATTCATTA