NAU_TM00314, NAU_TM00314 (genetic_marker) Gossypium hirsutum

Marker Overview
NameNAU_TM00314
dbSNP IDN/A
SNP Array ID
NAU_CottonSNP80K:NAU_TM00314
TypeSNP
SNP AllelesC/G
5' Flanking SequenceAGTGATATGCCTCGGTTTTTATAACTGAGTTACATAGATCCATTTTGTTTTTTGCTTATC
3' Flanking SequenceTCTGCTACTATTTTTTTGTTTTTTTCCTCTTTGTTTCTTGCATGTTGCGTGTTAGCTTCG
SpeciesGossypium hirsutum
Publication[view all]
ContactGuo, Wang-Zhen
Contact
NameDetails
Guo, Wang-Zhen
First name:Wang-Zhen
Last name:Guo
Institution:Nanjing Agri Univ
Address:Weigang No.1, Nanjing, Jiangsu Prov 210095
Country:China
Email:moelab@njau.edu.cn
Phone:+086 25 84395311
Fax:+086 25 84395307
Keywords:Cotton Genomics
Last update:20-Sep-2011
Libraries
Library NameType
NAU_CottonSNP80KSNP_chip
Alignments
The following features are aligned
Feature Name Type LocationAnalysisReference
CM018202.1chromosomeCM018202.1:6674524..6674644 +Gossypium barbadense (AD2) '3-79' genome HGS_v1.1n/a
Chr01_CRI-A2_v1.0.a1chromosomeChr01_CRI-A2_v1.0.a1:7631625..7631746 +Gossypium arboreum (A2) 'SXY1' genome CRI-updated_v1n/a
At_chr2chromosomeAt_chr2:6681883..6682003 +Gossypium hirsutum (AD1) 'TM-1' genome CGP-BGI_v1n/a
A01chromosomeA01:6246668..6246788 +Gossypium hirsutum (AD1) 'TM-1' genome NAU-NBI_v1.1n/a
Ghir_A01chromosomeGhir_A01:6745125..6745245 +Gossypium hirsutum (AD1) 'TM-1' genome HAU_v1 / v1.1n/a
A01chromosomeA01:6395939..6396059 +Gossypium hirsutum (AD1) 'TM-1' genome ZJU-improved_v2.1_a1n/a
A01chromosomeA01:6734330..6734450 +Gossypium hirsutum (AD1) 'TM-1' genome CRI_v1n/a
A01chromosomeA01:6681553..6681673 +Gossypium hirsutum (AD1) 'ZM24' genome CRI_v1n/a
Gbar_A01chromosomeGbar_A01:6637812..6637932 +Gossypium barbadense (AD2) '3-79' genome HAU_v2_a1n/a
A01chromosomeA01:6381906..6382026 +Gossypium barbadense (AD2) 'H7124' genome ZJU_v1.1_a1n/a
CM017610.1chromosomeCM017610.1:7653299..7653419 +Gossypium tomentosum (AD3) genome HGS_v1.1n/a
CM017636.1chromosomeCM017636.1:6671474..6671594 +Gossypium mustelinum (AD4) genome JGI_v1.1n/a
CM017688.1chromosomeCM017688.1:6786853..6786973 +Gossypium darwinii (AD5) genome HGS_v1.1n/a
A01chromosomeA01:6706404..6706524 +Gossypium hirsutum (AD1) 'TM-1' genome UTX_v2.1n/a
Chr01chromosomeChr01:7444149..7444270 +Gossypium arboreum (A2) 'SXY1' genome WHU-updated v1n/a
Map Positions
#Map NameLinkage GroupBinPositionLocusMapViewer
1Yumian-1 x Acala Maxxa, RIL (2018)AD_ch01_At.01N/A40.2TM314View
Sequence
>NAU_TM00314 ID=NAU_TM00314; Name=NAU_TM00314; organism=Gossypium hirsutum; type=genetic_marker; length=125bp
AGTGATATGCCTCGGTTTTTATAACTGAGTTACATAGATCCATTTTGTTT
TTTGCTTATC[C/G]TCTGCTACTATTTTTTTGTTTTTTTCCTCTTTGTT
TCTTGCATGTTGCGTGTTAGCTTCG