NAU_TM00272, NAU_TM00272 (genetic_marker) Gossypium hirsutum

Marker Overview
NameNAU_TM00272
dbSNP IDN/A
SNP Array ID
NAU_CottonSNP80K:NAU_TM00272
TypeSNP
SNP AllelesT/A
5' Flanking SequenceCGCGAACAAATTGGCGTGTCTAAAAGCCAGTTAGATTCTATCAAGGGAGATAGAGATCAA
3' Flanking SequenceTTTAAACAACTCACGCGGTTGAGGCCGTTGATTCAAGTTGGGCTTTTCAAATCACAAAAG
SpeciesGossypium hirsutum
Publication[view all]
ContactGuo, Wang-Zhen
Contact
NameDetails
Guo, Wang-Zhen
First name:Wang-Zhen
Last name:Guo
Institution:Nanjing Agri Univ
Address:Weigang No.1, Nanjing, Jiangsu Prov 210095
Country:China
Email:moelab@njau.edu.cn
Phone:+086 25 84395311
Fax:+086 25 84395307
Keywords:Cotton Genomics
Last update:20-Sep-2011
Libraries
Library NameType
NAU_CottonSNP80KSNP_chip
Alignments
The following features are aligned
Feature Name Type LocationAnalysisReference
CM018202.1chromosomeCM018202.1:5611119..5611239 +Gossypium barbadense (AD2) '3-79' genome HGS_v1.1n/a
Chr01_CRI-A2_v1.0.a1chromosomeChr01_CRI-A2_v1.0.a1:6287894..6288014 +Gossypium arboreum (A2) 'SXY1' genome CRI-updated_v1n/a
At_chr2chromosomeAt_chr2:6480651..6480771 -Gossypium hirsutum (AD1) 'TM-1' genome CGP-BGI_v1n/a
A01chromosomeA01:5276359..5276479 +Gossypium hirsutum (AD1) 'TM-1' genome NAU-NBI_v1.1n/a
Ghir_A01chromosomeGhir_A01:5739865..5739985 +Gossypium hirsutum (AD1) 'TM-1' genome HAU_v1 / v1.1n/a
A01chromosomeA01:5480538..5480658 +Gossypium hirsutum (AD1) 'TM-1' genome ZJU-improved_v2.1_a1n/a
A01chromosomeA01:5741299..5741419 +Gossypium hirsutum (AD1) 'TM-1' genome CRI_v1n/a
A01chromosomeA01:5688566..5688686 +Gossypium hirsutum (AD1) 'ZM24' genome CRI_v1n/a
Gbar_A01chromosomeGbar_A01:5553172..5553292 +Gossypium barbadense (AD2) '3-79' genome HAU_v2_a1n/a
A01chromosomeA01:5483819..5483939 +Gossypium barbadense (AD2) 'H7124' genome ZJU_v1.1_a1n/a
CM017610.1chromosomeCM017610.1:6254607..6254727 +Gossypium tomentosum (AD3) genome HGS_v1.1n/a
CM017636.1chromosomeCM017636.1:5673892..5674012 +Gossypium mustelinum (AD4) genome JGI_v1.1n/a
CM017688.1chromosomeCM017688.1:5745206..5745326 +Gossypium darwinii (AD5) genome HGS_v1.1n/a
A01chromosomeA01:5718997..5719117 +Gossypium hirsutum (AD1) 'TM-1' genome UTX_v2.1n/a
Chr01chromosomeChr01:6085387..6085507 +Gossypium arboreum (A2) 'SXY1' genome WHU-updated v1n/a
Sequence
>NAU_TM00272 ID=NAU_TM00272; Name=NAU_TM00272; organism=Gossypium hirsutum; type=genetic_marker; length=125bp
CGCGAACAAATTGGCGTGTCTAAAAGCCAGTTAGATTCTATCAAGGGAGA
TAGAGATCAA[A/T]TTTAAACAACTCACGCGGTTGAGGCCGTTGATTCA
AGTTGGGCTTTTCAAATCACAAAAG