NAU_TM00212, NAU_TM00212 (genetic_marker) Gossypium hirsutum

Marker Overview
NameNAU_TM00212
dbSNP IDN/A
SNP Array ID
NAU_CottonSNP80K:NAU_TM00212
TypeSNP
SNP AllelesT/A
5' Flanking SequenceAGTAACTATCTGTTAACAGACTCATAACAATTAACTCAACTTCAACTAACTATTTTGACT
3' Flanking SequenceGTTTATACAATTAATATTTCTTTCATTTCATAACATGGCCCATGCTTCTCGACTTTCACT
SpeciesGossypium hirsutum
Publication[view all]
ContactGuo, Wang-Zhen
Contact
NameDetails
Guo, Wang-Zhen
First name:Wang-Zhen
Last name:Guo
Institution:Nanjing Agri Univ
Address:Weigang No.1, Nanjing, Jiangsu Prov 210095
Country:China
Email:moelab@njau.edu.cn
Phone:+086 25 84395311
Fax:+086 25 84395307
Keywords:Cotton Genomics
Last update:20-Sep-2011
Libraries
Library NameType
NAU_CottonSNP80KSNP_chip
Alignments
The following features are aligned
Feature Name Type LocationAnalysisReference
CM018202.1chromosomeCM018202.1:4608428..4608548 +Gossypium barbadense (AD2) '3-79' genome HGS_v1.1n/a
Chr01_CRI-A2_v1.0.a1chromosomeChr01_CRI-A2_v1.0.a1:4958840..4958960 +Gossypium arboreum (A2) 'SXY1' genome CRI-updated_v1n/a
scaffold2385.1supercontigscaffold2385.1:134705..134825 +Gossypium hirsutum (AD1) 'TM-1' genome CGP-BGI_v1n/a
A01chromosomeA01:4306330..4306450 +Gossypium hirsutum (AD1) 'TM-1' genome NAU-NBI_v1.1n/a
Ghir_A01chromosomeGhir_A01:4776574..4776694 +Gossypium hirsutum (AD1) 'TM-1' genome HAU_v1 / v1.1n/a
A01chromosomeA01:4532832..4532952 +Gossypium hirsutum (AD1) 'TM-1' genome ZJU-improved_v2.1_a1n/a
A01chromosomeA01:4776947..4777067 +Gossypium hirsutum (AD1) 'TM-1' genome CRI_v1n/a
A01chromosomeA01:4723813..4723933 +Gossypium hirsutum (AD1) 'ZM24' genome CRI_v1n/a
Gbar_A01chromosomeGbar_A01:4551669..4551789 +Gossypium barbadense (AD2) '3-79' genome HAU_v2_a1n/a
A01chromosomeA01:4517220..4517340 +Gossypium barbadense (AD2) 'H7124' genome ZJU_v1.1_a1n/a
CM017610.1chromosomeCM017610.1:5233521..5233641 -Gossypium tomentosum (AD3) genome HGS_v1.1n/a
CM017688.1chromosomeCM017688.1:4645799..4645919 +Gossypium darwinii (AD5) genome HGS_v1.1n/a
A01chromosomeA01:4754292..4754412 +Gossypium hirsutum (AD1) 'TM-1' genome UTX_v2.1n/a
Chr01chromosomeChr01:4551414..4551534 +Gossypium herbaceum (A1) 'Mutema' genome WHU_v1n/a
Chr01chromosomeChr01:4933276..4933396 +Gossypium arboreum (A2) 'SXY1' genome WHU-updated v1n/a
Map Positions
#Map NameLinkage GroupBinPositionLocusMapViewer
1Yumian-1 x Acala Maxxa, RIL (2018)AD_ch01_At.01N/A31.8TM212View
Sequence
>NAU_TM00212 ID=NAU_TM00212; Name=NAU_TM00212; organism=Gossypium hirsutum; type=genetic_marker; length=125bp
AGTAACTATCTGTTAACAGACTCATAACAATTAACTCAACTTCAACTAAC
TATTTTGACT[A/T]GTTTATACAATTAATATTTCTTTCATTTCATAACA
TGGCCCATGCTTCTCGACTTTCACT