NAU_TM00153, NAU_TM00153 (genetic_marker) Gossypium hirsutum

Marker Overview
NameNAU_TM00153
dbSNP IDN/A
SNP Array ID
NAU_CottonSNP80K:NAU_TM00153
TypeSNP
SNP AllelesT/C
5' Flanking SequenceCGATCGACTTCGATAACACTCCCATTGCCGATCCAACACCTGACGCACAATAAACAAAAG
3' Flanking SequenceGATGGGCGATCAAACAATCCGCGAGTTAGCGGCGGCTCCTGCGGAACAACAACCCCTTTG
SpeciesGossypium hirsutum
Publication[view all]
ContactGuo, Wang-Zhen
Contact
NameDetails
Guo, Wang-Zhen
First name:Wang-Zhen
Last name:Guo
Institution:Nanjing Agri Univ
Address:Weigang No.1, Nanjing, Jiangsu Prov 210095
Country:China
Email:moelab@njau.edu.cn
Phone:+086 25 84395311
Fax:+086 25 84395307
Keywords:Cotton Genomics
Last update:20-Sep-2011
Libraries
Library NameType
NAU_CottonSNP80KSNP_chip
Alignments
The following features are aligned
Feature Name Type LocationAnalysisReference
CM018202.1chromosomeCM018202.1:3676131..3676251 +Gossypium barbadense (AD2) '3-79' genome HGS_v1.1n/a
Chr01_CRI-A2_v1.0.a1chromosomeChr01_CRI-A2_v1.0.a1:3783717..3783837 +Gossypium arboreum (A2) 'SXY1' genome CRI-updated_v1n/a
Dt_chr12chromosomeDt_chr12:30721757..30721877 -Gossypium hirsutum (AD1) 'TM-1' genome CGP-BGI_v1n/a
A01chromosomeA01:3415777..3415897 +Gossypium hirsutum (AD1) 'TM-1' genome NAU-NBI_v1.1n/a
Ghir_A01chromosomeGhir_A01:3941911..3942031 +Gossypium hirsutum (AD1) 'TM-1' genome HAU_v1 / v1.1n/a
A01chromosomeA01:3747165..3747285 +Gossypium hirsutum (AD1) 'TM-1' genome ZJU-improved_v2.1_a1n/a
A01chromosomeA01:3931634..3931754 +Gossypium hirsutum (AD1) 'TM-1' genome CRI_v1n/a
A01chromosomeA01:3886672..3886792 +Gossypium hirsutum (AD1) 'ZM24' genome CRI_v1n/a
Gbar_A01chromosomeGbar_A01:3665087..3665207 +Gossypium barbadense (AD2) '3-79' genome HAU_v2_a1n/a
A01chromosomeA01:3638896..3639016 +Gossypium barbadense (AD2) 'H7124' genome ZJU_v1.1_a1n/a
CM017610.1chromosomeCM017610.1:4204565..4204685 +Gossypium tomentosum (AD3) genome HGS_v1.1n/a
CM017636.1chromosomeCM017636.1:3653201..3653321 +Gossypium mustelinum (AD4) genome JGI_v1.1n/a
CM017688.1chromosomeCM017688.1:3709329..3709449 +Gossypium darwinii (AD5) genome HGS_v1.1n/a
A01chromosomeA01:3935777..3935897 +Gossypium hirsutum (AD1) 'TM-1' genome UTX_v2.1n/a
Chr01chromosomeChr01:3783883..3784003 +Gossypium herbaceum (A1) 'Mutema' genome WHU_v1n/a
Chr01chromosomeChr01:3772576..3772696 +Gossypium arboreum (A2) 'SXY1' genome WHU-updated v1n/a
Sequence
>NAU_TM00153 ID=NAU_TM00153; Name=NAU_TM00153; organism=Gossypium hirsutum; type=genetic_marker; length=125bp
CGATCGACTTCGATAACACTCCCATTGCCGATCCAACACCTGACGCACAA
TAAACAAAAG[C/T]GATGGGCGATCAAACAATCCGCGAGTTAGCGGCGG
CTCCTGCGGAACAACAACCCCTTTG