NAU_TM00092, NAU_TM00092 (genetic_marker) Gossypium hirsutum

Marker Overview
NameNAU_TM00092
dbSNP IDN/A
SNP Array ID
NAU_CottonSNP80K:NAU_TM00092
TypeSNP
SNP AllelesC/A
5' Flanking SequenceCTTGGGTACAAAGAAGACCAATCTTGAGGTACCTACAAGCCTCCTCCGCATCGAAATCAA
3' Flanking SequenceGTTCAGCAATTCGTCTACCAACCCGACCAGCTCCCTTTTCTCGTAAAGGTCCCATGTCTG
SpeciesGossypium hirsutum
Publication[view all]
ContactGuo, Wang-Zhen
Contact
NameDetails
Guo, Wang-Zhen
First name:Wang-Zhen
Last name:Guo
Institution:Nanjing Agri Univ
Address:Weigang No.1, Nanjing, Jiangsu Prov 210095
Country:China
Email:moelab@njau.edu.cn
Phone:+086 25 84395311
Fax:+086 25 84395307
Keywords:Cotton Genomics
Last update:20-Sep-2011
Libraries
Library NameType
NAU_CottonSNP80KSNP_chip
Alignments
The following features are aligned
Feature Name Type LocationAnalysisReference
CM018202.1chromosomeCM018202.1:2671325..2671445 +Gossypium barbadense (AD2) '3-79' genome HGS_v1.1n/a
Chr01_CRI-A2_v1.0.a1chromosomeChr01_CRI-A2_v1.0.a1:2682567..2682686 +Gossypium arboreum (A2) 'SXY1' genome CRI-updated_v1n/a
A01chromosomeA01:2393767..2393887 +Gossypium hirsutum (AD1) 'TM-1' genome NAU-NBI_v1.1n/a
Ghir_A01chromosomeGhir_A01:2947389..2947509 +Gossypium hirsutum (AD1) 'TM-1' genome HAU_v1 / v1.1n/a
A01chromosomeA01:2819730..2819850 +Gossypium hirsutum (AD1) 'TM-1' genome ZJU-improved_v2.1_a1n/a
A01chromosomeA01:2949963..2950083 +Gossypium hirsutum (AD1) 'TM-1' genome CRI_v1n/a
A01chromosomeA01:2902083..2902203 +Gossypium hirsutum (AD1) 'ZM24' genome CRI_v1n/a
Gbar_A01chromosomeGbar_A01:2660767..2660887 +Gossypium barbadense (AD2) '3-79' genome HAU_v2_a1n/a
A01chromosomeA01:2659597..2659717 +Gossypium barbadense (AD2) 'H7124' genome ZJU_v1.1_a1n/a
CM017610.1chromosomeCM017610.1:3178804..3178924 +Gossypium tomentosum (AD3) genome HGS_v1.1n/a
CM017636.1chromosomeCM017636.1:2689130..2689250 +Gossypium mustelinum (AD4) genome JGI_v1.1n/a
CM017688.1chromosomeCM017688.1:2671033..2671153 +Gossypium darwinii (AD5) genome HGS_v1.1n/a
A01chromosomeA01:2947582..2947702 +Gossypium hirsutum (AD1) 'TM-1' genome UTX_v2.1n/a
Chr01chromosomeChr01:2663270..2663390 +Gossypium herbaceum (A1) 'Mutema' genome WHU_v1n/a
Chr01chromosomeChr01:2602758..2602878 +Gossypium arboreum (A2) 'SXY1' genome WHU-updated v1n/a
Sequence
>NAU_TM00092 ID=NAU_TM00092; Name=NAU_TM00092; organism=Gossypium hirsutum; type=genetic_marker; length=125bp
CTTGGGTACAAAGAAGACCAATCTTGAGGTACCTACAAGCCTCCTCCGCA
TCGAAATCAA[A/C]GTTCAGCAATTCGTCTACCAACCCGACCAGCTCCC
TTTTCTCGTAAAGGTCCCATGTCTG