NAU_TM00069, NAU_TM00069 (genetic_marker) Gossypium hirsutum

Marker Overview
NameNAU_TM00069
dbSNP IDN/A
SNP Array ID
NAU_CottonSNP80K:NAU_TM00069
TypeSNP
SNP AllelesA/C
5' Flanking SequenceCCAAGAAGTGTCAAAATTGCAAAATCAAGTACCAGTGATATACCTATTTGCTGTTCTGTT
3' Flanking SequenceTGATCAATACACACTGCTTGTGTTATCCATGCAGCTTGCCATCAAAAGTAATTTTTTTTC
SpeciesGossypium hirsutum
Publication[view all]
ContactGuo, Wang-Zhen
Contact
NameDetails
Guo, Wang-Zhen
First name:Wang-Zhen
Last name:Guo
Institution:Nanjing Agri Univ
Address:Weigang No.1, Nanjing, Jiangsu Prov 210095
Country:China
Email:moelab@njau.edu.cn
Phone:+086 25 84395311
Fax:+086 25 84395307
Keywords:Cotton Genomics
Last update:20-Sep-2011
Libraries
Library NameType
NAU_CottonSNP80KSNP_chip
Alignments
The following features are aligned
Feature Name Type LocationAnalysisReference
CM018202.1chromosomeCM018202.1:2083147..2083266 +Gossypium barbadense (AD2) '3-79' genome HGS_v1.1n/a
Chr01_CRI-A2_v1.0.a1chromosomeChr01_CRI-A2_v1.0.a1:2076830..2076950 +Gossypium arboreum (A2) 'SXY1' genome CRI-updated_v1n/a
A01chromosomeA01:1831930..1832050 +Gossypium hirsutum (AD1) 'TM-1' genome NAU-NBI_v1.1n/a
Ghir_A01chromosomeGhir_A01:2347052..2347172 +Gossypium hirsutum (AD1) 'TM-1' genome HAU_v1 / v1.1n/a
A01chromosomeA01:2267260..2267380 +Gossypium hirsutum (AD1) 'TM-1' genome ZJU-improved_v2.1_a1n/a
A01chromosomeA01:2383240..2383360 +Gossypium hirsutum (AD1) 'TM-1' genome CRI_v1n/a
A01chromosomeA01:2335047..2335167 +Gossypium hirsutum (AD1) 'ZM24' genome CRI_v1n/a
Gbar_A01chromosomeGbar_A01:2054520..2054639 +Gossypium barbadense (AD2) '3-79' genome HAU_v2_a1n/a
A01chromosomeA01:2071796..2071915 +Gossypium barbadense (AD2) 'H7124' genome ZJU_v1.1_a1n/a
CM017610.1chromosomeCM017610.1:2614601..2614721 +Gossypium tomentosum (AD3) genome HGS_v1.1n/a
CM017636.1chromosomeCM017636.1:2124315..2124434 +Gossypium mustelinum (AD4) genome JGI_v1.1n/a
CM017688.1chromosomeCM017688.1:2135128..2135247 +Gossypium darwinii (AD5) genome HGS_v1.1n/a
A01chromosomeA01:2380583..2380703 +Gossypium hirsutum (AD1) 'TM-1' genome UTX_v2.1n/a
Chr01chromosomeChr01:2083056..2083175 +Gossypium herbaceum (A1) 'Mutema' genome WHU_v1n/a
Chr01chromosomeChr01:2009910..2010029 +Gossypium arboreum (A2) 'SXY1' genome WHU-updated v1n/a
B_01chromosomeB_01:2169652..2169771 +Gossypium anomalum (B1) genome NSF_v1n/a
Chr02chromosomeChr02:1766516..1766637 +Gossypium aridum (D4) genome ISU_v1n/a
Chr02chromosomeChr02:1559947..1560068 +Gossypium gossypioides (D6) genome ISU_v1n/a
Chr02chromosomeChr02:1808650..1808770 +Gossypium lobatum (D7) genome ISU_v1n/a
E01chromosomeE01:2327919..2328040 +Gossypium stocksii (E1) genome NSF_v1n/a
Chr01chromosomeChr01:197571882..197572003 -Gossypium rotundifolium (K2) 'Grot K201' genome HAU_v1n/a
Sequence
>NAU_TM00069 ID=NAU_TM00069; Name=NAU_TM00069; organism=Gossypium hirsutum; type=genetic_marker; length=125bp
CCAAGAAGTGTCAAAATTGCAAAATCAAGTACCAGTGATATACCTATTTG
CTGTTCTGTT[A/C]TGATCAATACACACTGCTTGTGTTATCCATGCAGC
TTGCCATCAAAAGTAATTTTTTTTC