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Marker Overview
| Name | TAMU_GH_TBh103N06r165 |
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| dbSNP ID | N/A |
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| Type | SNP |
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| SNP Alleles | T/A |
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| Species | Gossypium longicalyx |
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| PCR Condition | Tm: optimum, 57 ; minimum, 55 ; maximum, 60 ; max difference, 2 ; product size: minimum, 50 bp; optimum, 50 bp; maximum, 100 bp |
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| Max Length | 50 |
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| Publication | [view all] |
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| Contact | Stelly, David M.
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| Comment | KASP assay uses a 3 primer system. Two that are allele specific, one for each SNP base and then 1 common that should not contain any SNP bases. |
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Alignments
The following features are aligned
Publications
| Year | Publication |
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| 2015 | Hulse-Kemp AM, Ashrafi H, Stoffel K, Zheng X, Saski C, Scheffler BE, Fang DD, Chen ZJ, Van Deynze A, Stelly DM. BAC-End Sequence-Based SNP Mining in Allotetraploid Cotton (Gossypium) Utilizing Resequencing Data, Phylogenetic Inferences and Perspectives for Genetic Mapping. G3 (Bethesda, Md.). 2015 Apr 9. |
Sequence
>TAMU_GH_TBh103N06r165 ID=TAMU_GH_TBh103N06r165; Name=TAMU_GH_TBh103N06r165; organism=Gossypium longicalyx; type=genetic_marker; length=105bp
TCATGATCATGAATCTATAAAGTTGGTTAGAGTGTTTAAATTTTAACAAC
[A/T]CTAAGGTAACAACCAATAAGACAATCAATGTGTACTTCATAAAAA
AAAAT
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