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Marker Overview
Name | NBRI_SNP66081 |
dbSNP ID | N/A |
SNP Array ID | TAMU_CottonSNP63K: | i49771Gh |
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Type | SNP |
SNP Alleles | T/G |
5' Flanking Sequence | ATTATCAGCTTGGAAGTTGGGATCATGGCGGACCGCAGTAGCTTTNGAGTGCCTCCGGAA
GTATGCAGTTACATAATGAACCTACAAAGAAGATAAATNGGGCGTTGAAGTAGCGTTCAG
TACTTCAGTGCGTGTCTTAAAGCATTGGAA |
3' Flanking Sequence | TGAAGTTAGGGACAGTGATGAACTA |
Species | Gossypium hirsutum |
Source Type | genomic |
Publication | [view all] |
Contact | Stelly, David M.
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Comment | Data Obtained from publication, 2014. |
Alignments
The following features are aligned
Publications
Year | Publication |
2013 | Rai KM, Singh SK, Bhardwaj A, Kumar V, Lakhwani D, Srivastava A, Jena SN, Yadav HK, Bag SK, Sawant SV. Large-scale resource development in Gossypium hirsutum L. by 454 sequencing of genic-enriched libraries from six diverse genotypes. Plant biotechnology journal. 2013 Oct; 11(8):953-63. |
2015 | Hulse-Kemp AM, Lemm J, Plieske J, Ashrafi H, Buyyarapu R, Fang DD, Frelichowski J, Giband M, Hague S, Hinze LL, Kochan KJ, Riggs PK, Scheffler JA, Udall JA, Ulloa M, Wang SS, Zhu QH, Bag SK, Bhardwaj A, Burke JJ, Byers RL, Claverie M, Gore MA, Harker DB, Islam MS, Jenkins JN, Jones DC, Lacape JM, Llewellyn DJ, Percy RG, Pepper AE, Poland JA, Mohan Rai K, Sawant SV, Kumar Singh S, Spriggs A, Taylor JM, Wang F, Yourstone SM, Zheng X, Lawley CT, Ganal MW, Van Deynze A, Wilson IW, Stelly DM. Development of a 63K SNP Array for Cotton and High-Density Mapping of Intra- and Inter-Specific Populations of Gossypium spp. G3 (Bethesda, Md.). 2015 Apr 22. |
Sequence
>NBRI_SNP66081 ID=NBRI_SNP66081; Name=NBRI_SNP66081; organism=Gossypium hirsutum; type=genetic_marker; length=180bp ATTATCAGCTTGGAAGTTGGGATCATGGCGGACCGCAGTAGCTTTNGAGT GCCTCCGGAAGTATGCAGTTACATAATGAACCTACAAAGAAGATAAATNG GGCGTTGAAGTAGCGTTCAGTACTTCAGTGCGTGTCTTAAAGCATTGGAA [T/G]TGAAGTTAGGGACAGTGATGAACTA
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