g.arboreum_cottongen_reftransV1_0013846, g.arboreum_cottongen_reftransV1_0013846 (contig) Gossypium arboreum

Overview
Nameg.arboreum_cottongen_reftransV1_0013846
Unique Nameg.arboreum_cottongen_reftransV1_0013846
Typecontig
OrganismGossypium arboreum (Tree cotton)
Sequence length1104
Homology
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BLAST of g.arboreum_cottongen_reftransV1_0013846 vs. ExPASy TrEMBL
Match: A0A0B0PTQ5_GOSAR (Ras-related RABC2a-like protein OS=Gossypium arboreum GN=F383_05546 PE=4 SV=1)

HSP 1 Score: 399.053 bits (1024), Expect = 3.901e-136
Identity = 196/200 (98.00%), Postives = 199/200 (99.50%), Query Frame = -1 
Query:  238 DLSFKILLIGDSSVGKSSMLLSFISASAEDLAPTIGVDFKVKLLSVGGKRLKLTIWDTAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVELFSTNQDCVKMLVGNKVDRDSERAVTREEGVALAKELGSMFLECSAKTRENVEQCFEELALKIMEIPSLLEEGSSVGKRNMLKQKSEYQASPGGGCCS 837
            DLSFKILLIGDS VGKSS+L+SFISASAEDLAPTIGVDFK+KLLSVGGKRLKLTIWDTAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVELFSTNQDCVKMLVGNKVDRDSERAVTREEGVALAKELGSMFLECSAKTRENVEQCFEELALKIMEIPSLLEEGSSVGKRNMLKQKSEYQASPGGGCCS
Sbjct:   13 DLSFKILLIGDSGVGKSSLLVSFISASAEDLAPTIGVDFKIKLLSVGGKRLKLTIWDTAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVELFSTNQDCVKMLVGNKVDRDSERAVTREEGVALAKELGSMFLECSAKTRENVEQCFEELALKIMEIPSLLEEGSSVGKRNMLKQKSEYQASPGGGCCS 212
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BLAST of g.arboreum_cottongen_reftransV1_0013846 vs. ExPASy TrEMBL
Match: A0A0D2SGR0_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_009G412800 PE=4 SV=1)

HSP 1 Score: 393.275 bits (1009), Expect = 8.978e-134
Identity = 192/200 (96.00%), Postives = 197/200 (98.50%), Query Frame = -1 
Query:  238 DLSFKILLIGDSSVGKSSMLLSFISASAEDLAPTIGVDFKVKLLSVGGKRLKLTIWDTAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVELFSTNQDCVKMLVGNKVDRDSERAVTREEGVALAKELGSMFLECSAKTRENVEQCFEELALKIMEIPSLLEEGSSVGKRNMLKQKSEYQASPGGGCCS 837
            DLSFKILLIGDS VGKSS+L+SFIS SAEDLAPTIGVDFK+KLL+VGGKRLKLTIWDTAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVEL+STNQDCVKMLVGNKVDRDSERAVTREEGVALAKELGSMFLECSAKTRENVEQCFEELALKIMEIPSLLEEGSSVGKRNMLKQK EYQASPGGGCCS
Sbjct:   13 DLSFKILLIGDSGVGKSSLLVSFISTSAEDLAPTIGVDFKIKLLTVGGKRLKLTIWDTAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVELYSTNQDCVKMLVGNKVDRDSERAVTREEGVALAKELGSMFLECSAKTRENVEQCFEELALKIMEIPSLLEEGSSVGKRNMLKQKPEYQASPGGGCCS 212
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BLAST of g.arboreum_cottongen_reftransV1_0013846 vs. ExPASy TrEMBL
Match: A0A061ESE3_THECC (Rab gtpase c2a, alpha,atrab,atrab18b,atrabc2a,rabc2a OS=Theobroma cacao GN=TCM_022301 PE=3 SV=1)

HSP 1 Score: 373.244 bits (957), Expect = 5.211e-126
Identity = 180/200 (90.00%), Postives = 192/200 (96.00%), Query Frame = -1 
Query:  238 DLSFKILLIGDSSVGKSSMLLSFISASAEDLAPTIGVDFKVKLLSVGGKRLKLTIWDTAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVELFSTNQDCVKMLVGNKVDRDSERAVTREEGVALAKELGSMFLECSAKTRENVEQCFEELALKIMEIPSLLEEGSSVGKRNMLKQKSEYQASPGGGCCS 837
            DLSFKILLIGDS VGKSS+L+SFISAS  DLAPTIGVDFK+KLL+VGGKRLKLTIWDTAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAK+VEL+STNQDCVKMLVGNKVDRDSERAV+R+EG+ALAKELG MFLECSAKTRENVEQCFEELALKIME+PSLLEEGS+VGKRN+LKQK EY A PGG CCS
Sbjct:   13 DLSFKILLIGDSGVGKSSLLVSFISASVGDLAPTIGVDFKIKLLTVGGKRLKLTIWDTAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKDVELYSTNQDCVKMLVGNKVDRDSERAVSRDEGIALAKELGCMFLECSAKTRENVEQCFEELALKIMEVPSLLEEGSAVGKRNILKQKPEYHAPPGGSCCS 212
[Close]
BLAST of g.arboreum_cottongen_reftransV1_0013846 vs. ExPASy TrEMBL
Match: A0A0B0PBQ0_GOSAR (Ras-related RABC2a-like protein OS=Gossypium arboreum GN=F383_30344 PE=4 SV=1)

HSP 1 Score: 372.474 bits (955), Expect = 9.778e-126
Identity = 183/201 (91.04%), Postives = 195/201 (97.01%), Query Frame = -1 
Query:  238 CDLSFKILLIGDSSVGKSSMLLSFISASAEDLAPTIGVDFKVKLLSVGGKRLKLTIWDTAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVELFSTNQDCVKMLVGNKVDRDSERAVTREEGVALAKELGSMFLECSAKTRENVEQCFEELALKIMEIPSLLEEGSSVGKRNMLKQKSEYQASPGGGCCS 840
            CDLSFKILLIGDSSVGKSSMLLSFISASAEDLAPTIGVDFKVKLLSVGGKRLKLTIWDTAGQE+FRTLTSSYYRG+QGIILVYDVTRR+TFTNL+DVWAKEVEL+STNQDCVK+LVGNKVD DSERAV+REEG+ALAKELGS+FLECSAKTR+NVEQCFEELALKIME PSLLEEGS+VGKRN+LKQK E QA PGG CCS
Sbjct:   12 CDLSFKILLIGDSSVGKSSMLLSFISASAEDLAPTIGVDFKVKLLSVGGKRLKLTIWDTAGQEKFRTLTSSYYRGSQGIILVYDVTRRDTFTNLTDVWAKEVELYSTNQDCVKILVGNKVDMDSERAVSREEGIALAKELGSIFLECSAKTRKNVEQCFEELALKIMETPSLLEEGSAVGKRNILKQKPE-QAPPGGACCS 211
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BLAST of g.arboreum_cottongen_reftransV1_0013846 vs. ExPASy TrEMBL
Match: A0A0D2NTK6_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_006G161100 PE=4 SV=1)

HSP 1 Score: 372.859 bits (956), Expect = 1.033e-125
Identity = 183/201 (91.04%), Postives = 194/201 (96.52%), Query Frame = -1 
Query:  238 CDLSFKILLIGDSSVGKSSMLLSFISASAEDLAPTIGVDFKVKLLSVGGKRLKLTIWDTAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVELFSTNQDCVKMLVGNKVDRDSERAVTREEGVALAKELGSMFLECSAKTRENVEQCFEELALKIMEIPSLLEEGSSVGKRNMLKQKSEYQASPGGGCCS 840
            CDLSFKILLIGDSSVGKSSMLLSFISASAEDLAPTIGVDFKVKLLSVGGKRLKLTIWDTAGQE+FRTLTSSYYRG+QGIILVYDVTRR+TFTNL+DVWAKEVEL+STNQDCVK+LVGNKVD DSERAV+REEG+ALAKELGS+FLECSAKTR NVEQCFEELALKIME PSLLEEGS+VGKRN+LKQK E QA PGG CCS
Sbjct:   22 CDLSFKILLIGDSSVGKSSMLLSFISASAEDLAPTIGVDFKVKLLSVGGKRLKLTIWDTAGQEKFRTLTSSYYRGSQGIILVYDVTRRDTFTNLTDVWAKEVELYSTNQDCVKILVGNKVDMDSERAVSREEGIALAKELGSIFLECSAKTRINVEQCFEELALKIMETPSLLEEGSAVGKRNILKQKPE-QAPPGGACCS 221
[Close]
BLAST of g.arboreum_cottongen_reftransV1_0013846 vs. ExPASy TrEMBL
Match: A0A0D2SYW5_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_006G161100 PE=4 SV=1)

HSP 1 Score: 371.318 bits (952), Expect = 3.496e-125
Identity = 183/201 (91.04%), Postives = 194/201 (96.52%), Query Frame = -1 
Query:  238 CDLSFKILLIGDSSVGKSSMLLSFISASAEDLAPTIGVDFKVKLLSVGGKRLKLTIWDTAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVELFSTNQDCVKMLVGNKVDRDSERAVTREEGVALAKELGSMFLECSAKTRENVEQCFEELALKIMEIPSLLEEGSSVGKRNMLKQKSEYQASPGGGCCS 840
            CDLSFKILLIGDSSVGKSSMLLSFISASAEDLAPTIGVDFKVKLLSVGGKRLKLTIWDTAGQE+FRTLTSSYYRG+QGIILVYDVTRR+TFTNL+DVWAKEVEL+STNQDCVK+LVGNKVD DSERAV+REEG+ALAKELGS+FLECSAKTR NVEQCFEELALKIME PSLLEEGS+VGKRN+LKQK E QA PGG CCS
Sbjct:   12 CDLSFKILLIGDSSVGKSSMLLSFISASAEDLAPTIGVDFKVKLLSVGGKRLKLTIWDTAGQEKFRTLTSSYYRGSQGIILVYDVTRRDTFTNLTDVWAKEVELYSTNQDCVKILVGNKVDMDSERAVSREEGIALAKELGSIFLECSAKTRINVEQCFEELALKIMETPSLLEEGSAVGKRNILKQKPE-QAPPGGACCS 211
[Close]
BLAST of g.arboreum_cottongen_reftransV1_0013846 vs. ExPASy TrEMBL
Match: A0A0D2RX99_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_006G161100 PE=4 SV=1)

HSP 1 Score: 367.466 bits (942), Expect = 1.182e-123
Identity = 183/203 (90.15%), Postives = 195/203 (96.06%), Query Frame = -1 
Query:  238 CDLSFKILLIGDSSVGKSSMLLSFISASAEDLAPTIGVDFKVKLLSVGGKRLKLTIWDTAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVELFSTNQDCVKMLVGNKVD--RDSERAVTREEGVALAKELGSMFLECSAKTRENVEQCFEELALKIMEIPSLLEEGSSVGKRNMLKQKSEYQASPGGGCCS 840
            CDLSFKILLIGDSSVGKSSMLLSFISASAEDLAPTIGVDFKVKLLSVGGKRLKLTIWDTAGQE+FRTLTSSYYRG+QGIILVYDVTRR+TFTNL+DVWAKEVEL+STNQDCVK+LVGNKVD  +DSERAV+REEG+ALAKELGS+FLECSAKTR NVEQCFEELALKIME PSLLEEGS+VGKRN+LKQK E QA PGG CCS
Sbjct:   12 CDLSFKILLIGDSSVGKSSMLLSFISASAEDLAPTIGVDFKVKLLSVGGKRLKLTIWDTAGQEKFRTLTSSYYRGSQGIILVYDVTRRDTFTNLTDVWAKEVELYSTNQDCVKILVGNKVDMFQDSERAVSREEGIALAKELGSIFLECSAKTRINVEQCFEELALKIMETPSLLEEGSAVGKRNILKQKPE-QAPPGGACCS 213
[Close]
BLAST of g.arboreum_cottongen_reftransV1_0013846 vs. ExPASy TrEMBL
Match: A0A0D2Q7B9_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_002G160900 PE=4 SV=1)

HSP 1 Score: 362.844 bits (930), Expect = 7.382e-122
Identity = 175/200 (87.50%), Postives = 188/200 (94.00%), Query Frame = -1 
Query:  238 DLSFKILLIGDSSVGKSSMLLSFISASAEDLAPTIGVDFKVKLLSVGGKRLKLTIWDTAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVELFSTNQDCVKMLVGNKVDRDSERAVTREEGVALAKELGSMFLECSAKTRENVEQCFEELALKIMEIPSLLEEGSSVGKRNMLKQKSEYQASPGGGCCS 837
            DLSFKILLIGDS VGKSS+L+SFISASAEDLAPTIGVDFK+K L+VGGKRLKLTIWDTAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLS VWAKEVEL+STNQDCVKMLVGNKVDRDSERAV+REEG+ LAKELG MFLECSAKTR+NVEQCFE L+LKIME+PS LEEGS++GKRNMLK K EY+   GGGCCS
Sbjct:   13 DLSFKILLIGDSGVGKSSLLVSFISASAEDLAPTIGVDFKIKFLTVGGKRLKLTIWDTAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSTVWAKEVELYSTNQDCVKMLVGNKVDRDSERAVSREEGMELAKELGCMFLECSAKTRKNVEQCFEGLSLKIMEVPSFLEEGSAIGKRNMLKHKPEYRGHQGGGCCS 212
[Close]
BLAST of g.arboreum_cottongen_reftransV1_0013846 vs. ExPASy TrEMBL
Match: W9RGG6_9ROSA (Ras-related protein RABC2a OS=Morus notabilis GN=L484_022582 PE=3 SV=1)

HSP 1 Score: 361.688 bits (927), Expect = 1.703e-121
Identity = 172/199 (86.43%), Postives = 191/199 (95.98%), Query Frame = -1 
Query:  241 DLSFKILLIGDSSVGKSSMLLSFISASAEDLAPTIGVDFKVKLLSVGGKRLKLTIWDTAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVELFSTNQDCVKMLVGNKVDRDSERAVTREEGVALAKELGSMFLECSAKTRENVEQCFEELALKIMEIPSLLEEGSSVGKRNMLKQKSEYQASPGGGCC 837
            DLSFKILLIGDS VGKSS+L+SFISAS +DLAPTIGVDFK+KLL+VGGK+LKLTIWDTAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVEL+ TN+DCV+MLVGNKVDR+SERAV+REEG+ALAKELGS+FLECSAKTRENVEQCFEELALKIME+PSLLEEGS+  KRN++KQK ++QA PGG CC
Sbjct:   12 DLSFKILLIGDSGVGKSSLLVSFISASTDDLAPTIGVDFKIKLLTVGGKKLKLTIWDTAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVELYMTNKDCVRMLVGNKVDRESERAVSREEGMALAKELGSLFLECSAKTRENVEQCFEELALKIMEVPSLLEEGSNAVKRNIIKQKPDHQAPPGGACC 210
[Close]
BLAST of g.arboreum_cottongen_reftransV1_0013846 vs. ExPASy TrEMBL
Match: A0A067DLS1_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g028300mg PE=3 SV=1)

HSP 1 Score: 360.147 bits (923), Expect = 6.934e-121
Identity = 173/200 (86.50%), Postives = 190/200 (95.00%), Query Frame = -1 
Query:  238 DLSFKILLIGDSSVGKSSMLLSFISASAEDLAPTIGVDFKVKLLSVGGKRLKLTIWDTAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVELFSTNQDCVKMLVGNKVDRDSERAVTREEGVALAKELGSMFLECSAKTRENVEQCFEELALKIMEIPSLLEEGSSVGKRNMLKQKSEYQASPGGGCCS 837
            DLSFKILLIGDS VGKSS+L+SFIS+S +DL+PTIGVDFK+KLL+V GKRLKLTIWDTAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEV+L+STNQDCVKMLVGNKVDRDSER V+REEG+ALAKE GS+FLECSAKTRENVEQCFE+LALKIME+PSLLEEGS+V KRN+LKQK E Q+ P GGCCS
Sbjct:   12 DLSFKILLIGDSGVGKSSLLVSFISSSVDDLSPTIGVDFKIKLLTVAGKRLKLTIWDTAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLVGNKVDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIMEVPSLLEEGSNVVKRNILKQKPENQSPPIGGCCS 211
[Close]
BLAST of g.arboreum_cottongen_reftransV1_0013846 vs. ExPASy Swiss-Prot
Match: RAC2A_ARATH (Ras-related protein RABC2a OS=Arabidopsis thaliana GN=RABC2A PE=1 SV=1)

HSP 1 Score: 349.362 bits (895), Expect = 1.316e-118
Identity = 167/200 (83.50%), Postives = 185/200 (92.50%), Query Frame = -1 
Query:  238 DLSFKILLIGDSSVGKSSMLLSFISASAEDLAPTIGVDFKVKLLSVGGKRLKLTIWDTAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVELFSTNQDCVKMLVGNKVDRDSERAVTREEGVALAKELGSMFLECSAKTRENVEQCFEELALKIMEIPSLLEEGSSVGKRNMLKQKSEYQASPGGGCCS 837
            DLSFKILLIGDS VGKSS+L+SFIS+S EDLAPTIGVDFK+K L+VGGKRLKLTIWDTAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNL DVW KE+EL+STNQ+CV+MLVGNKVDR+SER V+REEG+ALAKEL  MFLECSA+TR+NVEQCFEELALKIME+PSLLEEGSS  KRN+LKQK E+Q +   GCCS
Sbjct:   11 DLSFKILLIGDSGVGKSSLLVSFISSSVEDLAPTIGVDFKIKQLTVGGKRLKLTIWDTAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLVDVWGKEIELYSTNQECVRMLVGNKVDRESERGVSREEGIALAKELNCMFLECSARTRQNVEQCFEELALKIMEVPSLLEEGSSAVKRNILKQKPEHQTNTQSGCCS 210
[Close]
BLAST of g.arboreum_cottongen_reftransV1_0013846 vs. ExPASy Swiss-Prot
Match: RABC1_ARATH (Ras-related protein RABC1 OS=Arabidopsis thaliana GN=RABC1 PE=1 SV=1)

HSP 1 Score: 298.901 bits (764), Expect = 1.012e-98
Identity = 140/186 (75.27%), Postives = 166/186 (89.25%), Query Frame = -1 
Query:  280 DLSFKILLIGDSSVGKSSMLLSFISASAEDLAPTIGVDFKVKLLSVGGKRLKLTIWDTAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVELFSTNQDCVKMLVGNKVDRDSERAVTREEGVALAKELGSMFLECSAKTRENVEQCFEELALKIMEIPSLLEEGSSVGKRNMLKQ 837
            D  FK+LLIGDS VGKSS+LLSF S + +DL+PTIGVDFKVK L++G K+LKL IWDTAGQERFRTLTSSYYRGAQGII+VYDVTRR+TFTNLSD+WAKE++L+STNQDC+KMLVGNKVD++SERAV+++EG+  A+E G +FLECSAKTR NVEQCFEEL LKI+E PSL  EGSS GK+N+ KQ
Sbjct:   11 DYLFKVLLIGDSGVGKSSLLLSFTSNTFDDLSPTIGVDFKVKYLTIGEKKLKLAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDIWAKEIDLYSTNQDCIKMLVGNKVDKESERAVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILETPSLTAEGSSGGKKNIFKQ 196
[Close]
BLAST of g.arboreum_cottongen_reftransV1_0013846 vs. ExPASy Swiss-Prot
Match: RAC2B_ARATH (Ras-related protein RABC2b OS=Arabidopsis thaliana GN=RABC2B PE=2 SV=1)

HSP 1 Score: 290.426 bits (742), Expect = 1.461e-95
Identity = 152/200 (76.00%), Postives = 176/200 (88.00%), Query Frame = -1 
Query:  238 DLSFKILLIGDSSVGKSSMLLSFISASAEDLAPTIGVDFKVKLLSVGGKRLKLTIWDTAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVELFSTNQDCVKMLVGNKVDRDSERAVTREEGVALAKELGSMFLECSAKTRENVEQCFEELALKIMEIPSLLEEGSSVGKRNMLKQKSEYQASPGGGCCS 837
            DLSFKILLIGDS VGKSS+LLSFIS+S EDLAPTIGVDFK+K + V GKRLKLTIWDTAGQE+FRTLTSSY+RG+QGIILVYDVT+RETF NL+D+WAKE+EL+STN DC+KMLVGNKVDR+SER V+REEG+ALAK+L  +F ECSA+TRENV  CFEELALKIME+PSLLEEGSS      +K+K +Y+A   G CCS
Sbjct:   11 DLSFKILLIGDSGVGKSSLLLSFISSSVEDLAPTIGVDFKIKQMKVRGKRLKLTIWDTAGQEKFRTLTSSYFRGSQGIILVYDVTKRETFLNLADIWAKEIELYSTNHDCIKMLVGNKVDRESERKVSREEGMALAKDLNCLFHECSARTRENVNGCFEELALKIMEVPSLLEEGSS-----SVKRKPDYRAHQ-GRCCS 204
[Close]
BLAST of g.arboreum_cottongen_reftransV1_0013846 vs. ExPASy Swiss-Prot
Match: RB18B_DANRE (Ras-related protein Rab-18-B OS=Danio rerio GN=rab18b PE=2 SV=1)

HSP 1 Score: 202.601 bits (514), Expect = 1.964e-61
Identity = 105/197 (53.30%), Postives = 137/197 (69.54%), Query Frame = -1 
Query:  244 SFKILLIGDSSVGKSSMLLSFISASAE-DLAPTIGVDFKVKLLSVGGKRLKLTIWDTAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVELFSTNQDCVKMLVGNKVDRDSERAVTREEGVALAKELGSMFLECSAKTRENVEQCFEELALKIMEIPSLLEEGSSVGKRNMLKQKSEYQASPGGGC 831
            + KIL+IG+S VGKSS+LL F   + + +LA TIGVDFKVK +++ G R KL IWDTAGQERFRTLT SYYRGAQG+ILVYDVT+R+TFT L + W  E+E + T  D VKMLVGNK+D+D+ R V R EG+  A++   +F+E SAKTR+ V+  FEEL  KI++ P L E         +   + + Q + GG C
Sbjct:    8 TLKILIIGESGVGKSSLLLRFTDDTFDPELAATIGVDFKVKTIAIDGNRAKLAIWDTAGQERFRTLTPSYYRGAQGVILVYDVTKRDTFTKLEN-WLNELETYCTRNDLVKMLVGNKIDKDN-REVDRNEGLKFARKHSMLFIEASAKTRDGVQCAFEELVEKILQTPGLWESSIQNHGVQLSDNEPQRQGACGGYC 202
[Close]
BLAST of g.arboreum_cottongen_reftransV1_0013846 vs. ExPASy Swiss-Prot
Match: YPTV3_VOLCA (GTP-binding protein yptV3 OS=Volvox carteri GN=YPTV3 PE=3 SV=1)

HSP 1 Score: 201.83 bits (512), Expect = 4.437e-61
Identity = 109/201 (54.23%), Postives = 137/201 (68.16%), Query Frame = -1 
Query:  238 DLSFKILLIGDSSVGKSSMLLSFISASAED-LAPTIGVDFKVKLLSVGGKRLKLTIWDTAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVELFSTNQDCVKMLVGNKVDRDSERAVTREEGVALAKELGSMFLECSAKTRENVEQCFEELALKIMEIPSLLEEGSSVGKRNMLKQKSEYQASPGGGCCS 837
            D +FK+LL+GDS VGKS +L  F S   E+    TIGVDFKVK L+  GKR KLTIWDTAGQERFRTLTSSYYRGAQGII VYDVTRR+TF +L   W +E +++ST +  +KM+V NKVD  ++R V+ EEG   A+  G +F+E SA+    V Q FEEL LKI++ P LLE  ++VG   +    +  QA    G CS
Sbjct:    7 DYTFKVLLVGDSGVGKSCILTRFTSGIFEESTTSTIGVDFKVKYLTADGKRCKLTIWDTAGQERFRTLTSSYYRGAQGIIFVYDVTRRDTFESLEANWMREFDIYSTVESAIKMVVANKVDLSAQRQVSSEEGHDFARRHGCLFVETSARANLAVGQAFEELLLKILDTPLLLET-TAVGGIKLGAVPTGQQA----GVCS 202
[Close]
BLAST of g.arboreum_cottongen_reftransV1_0013846 vs. ExPASy Swiss-Prot
Match: RAB18_MOUSE (Ras-related protein Rab-18 OS=Mus musculus GN=Rab18 PE=2 SV=2)

HSP 1 Score: 196.823 bits (499), Expect = 3.907e-59
Identity = 107/198 (54.04%), Postives = 137/198 (69.19%), Query Frame = -1 
Query:  241 SFKILLIGDSSVGKSSMLLSFISASAE-DLAPTIGVDFKVKLLSVGGKRLKLTIWDTAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVELFSTNQDCVKMLVGNKVDRDSERAVTREEGVALAKELGSMFLECSAKTRENVEQCFEELALKIMEIPSLLEEGSSVGKRNMLKQKSEYQASPGGGCC 831
            + KIL+IG+S VGKSS+LL F   + + +LA TIGVDFKVK +SV G + KL IWDTAGQERFRTLT SYYRGAQG+ILVYDVTRR+TF  L D W  E+E + T  D V MLVGNK+D+++ R V R EG+  A++   +F+E SAKT + V+  FEEL  KI++ P L E  +    +N   + S  + S GGG C
Sbjct:    8 TLKILIIGESGVGKSSLLLRFTDDTFDPELAATIGVDFKVKTISVDGNKAKLAIWDTAGQERFRTLTPSYYRGAQGVILVYDVTRRDTFVKL-DNWLNELETYCTRNDIVNMLVGNKIDKEN-REVDRNEGLKFARKHSMLFIEASAKTCDGVQCAFEELVEKIIQTPGLWESEN----QNKGVKLSHREESRGGGAC 199
[Close]
BLAST of g.arboreum_cottongen_reftransV1_0013846 vs. ExPASy Swiss-Prot
Match: RAB18_RAT (Ras-related protein Rab-18 OS=Rattus norvegicus GN=Rab18 PE=2 SV=1)

HSP 1 Score: 196.438 bits (498), Expect = 4.536e-59
Identity = 107/198 (54.04%), Postives = 137/198 (69.19%), Query Frame = -1 
Query:  241 SFKILLIGDSSVGKSSMLLSFISASAE-DLAPTIGVDFKVKLLSVGGKRLKLTIWDTAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVELFSTNQDCVKMLVGNKVDRDSERAVTREEGVALAKELGSMFLECSAKTRENVEQCFEELALKIMEIPSLLEEGSSVGKRNMLKQKSEYQASPGGGCC 831
            + KIL+IG+S VGKSS+LL F   + + +LA TIGVDFKVK +SV G + KL IWDTAGQERFRTLT SYYRGAQG+ILVYDVTRR+TF  L D W  E+E + T  D V MLVGNK+D+++ R V R EG+  A++   +F+E SAKT + V+  FEEL  KI++ P L E  +    +N   + S  + S GGG C
Sbjct:    8 TLKILIIGESGVGKSSLLLRFTDDTFDPELAATIGVDFKVKTISVDGNKAKLAIWDTAGQERFRTLTPSYYRGAQGVILVYDVTRRDTFVKL-DNWLNELETYCTRNDIVNMLVGNKIDKEN-REVDRNEGLKFARKHSMLFIEASAKTCDGVQCAFEELVEKIIQTPGLWESEN----QNKGVKLSPREESHGGGAC 199
[Close]
BLAST of g.arboreum_cottongen_reftransV1_0013846 vs. ExPASy Swiss-Prot
Match: RAB18_DICDI (Ras-related protein Rab-18 OS=Dictyostelium discoideum GN=rab18 PE=3 SV=1)

HSP 1 Score: 196.052 bits (497), Expect = 5.962e-59
Identity = 105/201 (52.24%), Postives = 137/201 (68.16%), Query Frame = -1 
Query:  238 DLSFKILLIGDSSVGKSSMLLSFISAS-AEDLAPTIGVDFKVKLLSVGGKRLKLTIWDTAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVELFSTNQDCVKMLVGNKVDRDSERAVTREEGVALAKELGSMFLECSAKTRENVEQCFEELALKIMEIPSLLEEGSSVGKRNMLKQKSEYQASPGGGCCS 837
            D  +K+LLIGDS VGK+S++  F   +  EDL  TIGV+FK+K + V GK++ L IWDTAGQE+FR L SSYYRGA GIIL YDVT+RE+F NL + W  EVE F+   + VK+LVGNK+D+++ R VTREEG   AK+   +F+ECSAK++  ++Q FEELA KI+EIP      S   +RN    K E +     G CS
Sbjct:    4 DKQYKVLLIGDSDVGKTSIVKRFSDDTFDEDLLCTIGVEFKMKEVKVDGKKVDLCIWDTAGQEKFRALISSYYRGAHGIILTYDVTKRESFDNL-NYWLNEVENFANRSNLVKLLVGNKIDKEN-REVTREEGAEFAKKKAMLFIECSAKSKIGIQQAFEELAQKIIEIPQNT-SSSQPKQRNTGSVKVEDEPDHNQGVCS 201
[Close]
BLAST of g.arboreum_cottongen_reftransV1_0013846 vs. ExPASy Swiss-Prot
Match: RAB18_CHICK (Ras-related protein Rab-18 OS=Gallus gallus GN=RAB18 PE=2 SV=1)

HSP 1 Score: 194.126 bits (492), Expect = 4.121e-58
Identity = 102/175 (58.29%), Postives = 128/175 (73.14%), Query Frame = -1 
Query:  310 SFKILLIGDSSVGKSSMLLSFISASAE-DLAPTIGVDFKVKLLSVGGKRLKLTIWDTAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVELFSTNQDCVKMLVGNKVDRDSERAVTREEGVALAKELGSMFLECSAKTRENVEQCFEELALKIMEIPSLLEEGS 831
            + KIL+IG+S VGKSS+LL F   + + +LA TIGVDFKVK +SV G + KL IWDTAGQERFRTLT SYYRGAQG+ILVYDVTRR+TF  L D W  E+E + T  D VKMLVGNK+D+++ R V R EG+  A++   +F+E SAKT + V+  FEEL  KI++ P L E  S
Sbjct:    8 TLKILIIGESGVGKSSLLLRFTDDTFDPELAATIGVDFKVKTISVDGNKAKLAIWDTAGQERFRTLTPSYYRGAQGVILVYDVTRRDTFVKL-DNWLNELETYCTRNDIVKMLVGNKIDKEN-REVDRNEGLKFARKHSMLFIEASAKTCDGVQCAFEELVEKIIQTPGLWESES 180
[Close]
BLAST of g.arboreum_cottongen_reftransV1_0013846 vs. ExPASy Swiss-Prot
Match: RAB18_PONAB (Ras-related protein Rab-18 OS=Pongo abelii GN=RAB18 PE=2 SV=1)

HSP 1 Score: 191.815 bits (486), Expect = 2.895e-57
Identity = 100/172 (58.14%), Postives = 126/172 (73.26%), Query Frame = -1 
Query:  319 SFKILLIGDSSVGKSSMLLSFISASAE-DLAPTIGVDFKVKLLSVGGKRLKLTIWDTAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVELFSTNQDCVKMLVGNKVDRDSERAVTREEGVALAKELGSMFLECSAKTRENVEQCFEELALKIMEIPSLLE 831
            + KIL+IG+S VGKSS+LL F   + + +LA TIGVDFKVK +SV G + KL IWDTAGQERFRTLT SYYRGAQG+ILVYDVTRR+TF  L D W  E+E + T  D V MLVGNK+D+++ R V R EG+  A++   +F+E SAKT + V+  FEEL  KI++ P L E
Sbjct:    8 TLKILIIGESGVGKSSLLLRFTDDTFDPELAATIGVDFKVKTISVDGNKAKLAIWDTAGQERFRTLTPSYYRGAQGVILVYDVTRRDTFVKL-DNWLNELETYCTRNDIVNMLVGNKIDKEN-REVDRNEGLKFARKHSMLFIEASAKTCDGVQCAFEELVEKIIQTPGLWE 177
The following BLAST results are available for this feature:
BLAST of g.arboreum_cottongen_reftransV1_0013846 vs. ExPASy TrEMBL
Analysis Date: 2016-11-15 (Homology Analysis for Gossypium arboreum CottonGen RefTrans V1 vs TrEMBL)
Total hits: 25
Match NameE-valueIdentityDescription
A0A0B0PTQ5_GOSAR3.901e-13698.00Ras-related RABC2a-like protein OS=Gossypium arbor... [more]
A0A0D2SGR0_GOSRA8.978e-13496.00Uncharacterized protein OS=Gossypium raimondii GN=... [more]
A0A061ESE3_THECC5.211e-12690.00Rab gtpase c2a, alpha,atrab,atrab18b,atrabc2a,rabc... [more]
A0A0B0PBQ0_GOSAR9.778e-12691.04Ras-related RABC2a-like protein OS=Gossypium arbor... [more]
A0A0D2NTK6_GOSRA1.033e-12591.04Uncharacterized protein OS=Gossypium raimondii GN=... [more]
A0A0D2SYW5_GOSRA3.496e-12591.04Uncharacterized protein OS=Gossypium raimondii GN=... [more]
A0A0D2RX99_GOSRA1.182e-12390.15Uncharacterized protein OS=Gossypium raimondii GN=... [more]
A0A0D2Q7B9_GOSRA7.382e-12287.50Uncharacterized protein OS=Gossypium raimondii GN=... [more]
W9RGG6_9ROSA1.703e-12186.43Ras-related protein RABC2a OS=Morus notabilis GN=L... [more]
A0A067DLS1_CITSI6.934e-12186.50Uncharacterized protein OS=Citrus sinensis GN=CISI... [more]

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BLAST of g.arboreum_cottongen_reftransV1_0013846 vs. ExPASy Swiss-Prot
Analysis Date: 2016-11-15 (Homology Analysis for Gossypium arboreum CottonGen RefTrans V1 vs SwissProt)
Total hits: 25
Match NameE-valueIdentityDescription
RAC2A_ARATH1.316e-11883.50Ras-related protein RABC2a OS=Arabidopsis thaliana... [more]
RABC1_ARATH1.012e-9875.27Ras-related protein RABC1 OS=Arabidopsis thaliana ... [more]
RAC2B_ARATH1.461e-9576.00Ras-related protein RABC2b OS=Arabidopsis thaliana... [more]
RB18B_DANRE1.964e-6153.30Ras-related protein Rab-18-B OS=Danio rerio GN=rab... [more]
YPTV3_VOLCA4.437e-6154.23GTP-binding protein yptV3 OS=Volvox carteri GN=YPT... [more]
RAB18_MOUSE3.907e-5954.04Ras-related protein Rab-18 OS=Mus musculus GN=Rab1... [more]
RAB18_RAT4.536e-5954.04Ras-related protein Rab-18 OS=Rattus norvegicus GN... [more]
RAB18_DICDI5.962e-5952.24Ras-related protein Rab-18 OS=Dictyostelium discoi... [more]
RAB18_CHICK4.121e-5858.29Ras-related protein Rab-18 OS=Gallus gallus GN=RAB... [more]
RAB18_PONAB2.895e-5758.14Ras-related protein Rab-18 OS=Pongo abelii GN=RAB1... [more]

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InterPro
Analysis Name: InterProScan analysis for Gossypium arboreum CottonGen RefTrans V1
Date Performed: 2016-11-14
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePRINTSPR00449RASTRNSFRMNGcoord: 107..123
score: 29.64
coord: 85..106
score: 46.22
coord: 189..202
score: 44.01
coord: 125..147
score: 50.96
coord: 224..246
score: 43.9
NoneNo IPR availableSMARTSM00176ran_sub_2coord: 90..281
e-value: 4.7E-4
score: 9.1
NoneNo IPR availableSMARTSM00173ras_sub_4coord: 82..249
e-value: 1.7E-26
score: 104.0
NoneNo IPR availableSMARTSM00175rab_sub_5coord: 85..249
e-value: 1.0E-92
score: 324.0
NoneNo IPR availableSMARTSM00177arf_sub_2coord: 70..250
e-value: 0.0056
score: -1.2
NoneNo IPR availableSMARTSM00174rho_sub_3coord: 87..249
e-value: 7.1E-14
score: 57.3
NoneNo IPR availablePANTHERPTHR24073FAMILY NOT NAMEDcoord: 77..281
NoneNo IPR availablePANTHERPTHR24073:SF536RAS-RELATED PROTEIN RABC2Acoord: 77..281
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 15..281
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..14
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..1
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 11..14
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 2..10
NoneNo IPR availablePROSITEPS51419RABcoord: 80..280
score: 31.371
IPR027417P-loop containing nucleoside triphosphate hydrolaseGENE3D3.40.50.300coord: 78..280
e-value: 1.8E-63
score: 213.0
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 82..259
IPR005225Small GTP-binding protein domainTIGRFAMTIGR00231TIGR00231coord: 85..241
e-value: 5.5E-26
score: 89.3
IPR001806Small GTPase superfamilyPFAMPF00071Rascoord: 86..247
e-value: 2.3E-53
score: 180.0

Sequences
The following sequences are available for this feature:

contig sequence

>g.arboreum_cottongen_reftransV1_0013846 ID=g.arboreum_cottongen_reftransV1_0013846; Name=g.arboreum_cottongen_reftransV1_0013846; organism=Gossypium arboreum; type=contig; length=1104bp
AAGGACAATCAATCTGATTTTTAATACAAACTAAAACTTAATCAAGACAA
AAGCAGAAGGCAAACAAATTTACACAAGTTAAATTCCAGTGGTAATGATA
CAATAATCTATGGCAAACAGCACTATAGGAAACCCAATAAATCATATACA
TAATCTGTTCACAACCAGTTAAGGTAGAAGCTTAAAGCCACCAAACATGG
CTTCATGTTAAAACAACTCAAATATCGCTGCAATTTAAGAGCAACAACCA
CCGCCGGGAGAAGCCTGGTACTCTGACTTCTGCTTTAACATGTTTCTCTT
TCCTACAGAAGACCCTTCTTCCAAAAGACTTGGAATTTCCATTATCTTCA
ATGCAAGCTCCTCAAAGCATTGCTCCACGTTTTCTCTTGTTTTAGCACTG
CATTCAAGAAACATGGATCCAAGCTCTTTTGCAAGTGCAACGCCTTCTTC
TCTAGTTACAGCCCTTTCGGAATCTCTGTCAACTTTATTTCCAACAAGCA
TCTTGACACAGTCCTGATTGGTAGAGAAAAGCTCCACTTCTTTGGCCCAA
ACATCAGACAAATTTGTGAAGGTCTCTCTCCGTGTTACATCATAAACAAG
AATGATCCCTTGGGCGCCCCGGTAGTAAGAGCTTGTTAAGGTTCTGAACC
TTTCCTGTCCAGCAGTATCCCAAATAGTGAGCTTTAACCTCTTCCCACCA
ACACTTAGCAACTTGACCTTAAAATCCACACCAATAGTGGGAGCTAGATC
TTCCGCAGAAGCTGAAATAAAGCTAAGAAGCATACTACTCTTGCCAACAG
ACGAGTCTCCGATCAACAAGATCTTGAATGAAAGATCACAGCTTCCACTA
CTTTGCCCTGAAAATGATCCCATTTGAATTTTTAAATCCAAAAACAAAAG
CCCAAACTTTAAAAAATTTCTCCTTTTAAAAAAAAAAAAATCTTCTTCTT
CTTTCTCAAAGTCTCTGTTGTATCCAATAAACCACCCCTTCAAAAGAAGG
GAAAAAGAAAACTTGGGTTTGAAAATGAATGGATTCTTTCTTTCTCTCAA
AAGTAGAGTGAAAAAGAAATGTAATAACAGAGAAGGGAAGAGAAGAGAAG
AAAA
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Annotated Terms
The following terms have been associated with this contig:
Vocabulary: INTERPRO
TermDefinition
IPR027417P-loop_NTPase
IPR005225Small_GTP-bd_dom
IPR001806Small_GTPase
Vocabulary: Molecular Function
TermDefinition
GO:0005525GTP binding
Vocabulary: Biological Process
TermDefinition
GO:0007264small GTPase-mediated signal transduction