g.arboreum_cottongen_reftransV1_0009178, g.arboreum_cottongen_reftransV1_0009178 (contig) Gossypium arboreum

Overview
Nameg.arboreum_cottongen_reftransV1_0009178
Unique Nameg.arboreum_cottongen_reftransV1_0009178
Typecontig
OrganismGossypium arboreum (Tree cotton)
Sequence length501
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Chr5chromosomeg.arboreum_cottongen_reftransV1_0009178:1..501 .
Chr5:27336659..27337858 +
Homology
[Close]
BLAST of g.arboreum_cottongen_reftransV1_0009178 vs. ExPASy TrEMBL
Match: A0A0B0PV49_GOSAR (Uncharacterized protein OS=Gossypium arboreum GN=F383_01316 PE=4 SV=1)

HSP 1 Score: 235.343 bits (599), Expect = 1.503e-69
Identity = 117/118 (99.15%), Postives = 117/118 (99.15%), Query Frame = 3 
Query:    3 ITRIKPSVTYIAAEEVMSLVTAQVAEHSELNEVWKDILNAEGDEIYVKDINLYMKEGEKLSFSELSERAFLRGEVAIGYIKNNKTVINPTPKSQPLSLETIDLLIVISELEGEQPVVV 356
            ITRIKPSVTYIAAEEVMSLVTAQVAEHSELNEVWKDILNAEGDEIYVKDINLYMKEGEKLSFSELSERAFLRGEVAIGYIKNNKTVINPTPKSQPLSLE IDLLIVISELEGEQPVVV
Sbjct:  644 ITRIKPSVTYIAAEEVMSLVTAQVAEHSELNEVWKDILNAEGDEIYVKDINLYMKEGEKLSFSELSERAFLRGEVAIGYIKNNKTVINPTPKSQPLSLEMIDLLIVISELEGEQPVVV 761
[Close]
BLAST of g.arboreum_cottongen_reftransV1_0009178 vs. ExPASy TrEMBL
Match: A0A061ELE5_THECC (Uncharacterized protein isoform 2 OS=Theobroma cacao GN=TCM_020766 PE=4 SV=1)

HSP 1 Score: 209.92 bits (533), Expect = 4.590e-60
Identity = 104/118 (88.14%), Postives = 110/118 (93.22%), Query Frame = 3 
Query:    3 ITRIKPSVTYIAAEEVMSLVTAQVAEHSELNEVWKDILNAEGDEIYVKDINLYMKEGEKLSFSELSERAFLRGEVAIGYIKNNKTVINPTPKSQPLSLETIDLLIVISELEGEQPVVV 356
            ITRIKPS+TYIAAEEV SLVTAQVAEHSELNEVWKDILNAEGDEIYVKDI+LYMKEGE+LSFSELSERA LR EVAIGYIK+NK VINPTPKS+PLSLE  D LIVISELEGEQP+ V
Sbjct:  744 ITRIKPSLTYIAAEEVTSLVTAQVAEHSELNEVWKDILNAEGDEIYVKDISLYMKEGERLSFSELSERACLRREVAIGYIKDNKKVINPTPKSEPLSLEMTDSLIVISELEGEQPIAV 861
[Close]
BLAST of g.arboreum_cottongen_reftransV1_0009178 vs. ExPASy TrEMBL
Match: A0A061EUA6_THECC (Uncharacterized protein isoform 1 OS=Theobroma cacao GN=TCM_020766 PE=4 SV=1)

HSP 1 Score: 207.994 bits (528), Expect = 5.330e-59
Identity = 104/118 (88.14%), Postives = 110/118 (93.22%), Query Frame = 3 
Query:    3 ITRIKPSVTYIAAEEVMSLVTAQVAEHSELNEVWKDILNAEGDEIYVKDINLYMKEGEKLSFSELSERAFLRGEVAIGYIKNNKTVINPTPKSQPLSLETIDLLIVISELEGEQPVVV 356
            ITRIKPS+TYIAAEEV SLVTAQVAEHSELNEVWKDILNAEGDEIYVKDI+LYMKEGE+LSFSELSERA LR EVAIGYIK+NK VINPTPKS+PLSLE  D LIVISELEGEQP+ V
Sbjct:  914 ITRIKPSLTYIAAEEVTSLVTAQVAEHSELNEVWKDILNAEGDEIYVKDISLYMKEGERLSFSELSERACLRREVAIGYIKDNKKVINPTPKSEPLSLEMTDSLIVISELEGEQPIAV 1031
[Close]
BLAST of g.arboreum_cottongen_reftransV1_0009178 vs. ExPASy TrEMBL
Match: W9RIN4_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_000618 PE=4 SV=1)

HSP 1 Score: 199.519 bits (506), Expect = 7.469e-58
Identity = 99/118 (83.90%), Postives = 109/118 (92.37%), Query Frame = 3 
Query:    3 ITRIKPSVTYIAAEEVMSLVTAQVAEHSELNEVWKDILNAEGDEIYVKDINLYMKEGEKLSFSELSERAFLRGEVAIGYIKNNKTVINPTPKSQPLSLETIDLLIVISELEGEQPVVV 356
            ITRIKPS+TYIAAEEVMSLVTAQVAE+SELNEVWKDILNAEGDEIYVKDI+LYMK+GE  SFSEL+ERA LR EVAIGY+KNNK VINP PKS+PLSLE  D LIVISELEGEQP+++
Sbjct:  380 ITRIKPSLTYIAAEEVMSLVTAQVAENSELNEVWKDILNAEGDEIYVKDISLYMKKGENPSFSELAERAHLRREVAIGYVKNNKKVINPVPKSEPLSLEITDSLIVISELEGEQPIIL 497
[Close]
BLAST of g.arboreum_cottongen_reftransV1_0009178 vs. ExPASy TrEMBL
Match: A0A0B0PTI5_GOSAR (Uncharacterized protein OS=Gossypium arboreum GN=F383_13387 PE=4 SV=1)

HSP 1 Score: 202.986 bits (515), Expect = 1.137e-57
Identity = 99/118 (83.90%), Postives = 106/118 (89.83%), Query Frame = 3 
Query:    3 ITRIKPSVTYIAAEEVMSLVTAQVAEHSELNEVWKDILNAEGDEIYVKDINLYMKEGEKLSFSELSERAFLRGEVAIGYIKNNKTVINPTPKSQPLSLETIDLLIVISELEGEQPVVV 356
            ITR KP++TYIAAEEVMSLVTAQVAEHSELNEVWKDILNAEGDEIY+KDI LYMKEGE  SF+ELSERA LR EVAIGYIKNNK VINP PK++PLS E  D LIVISELEGEQP+VV
Sbjct:  712 ITRFKPTLTYIAAEEVMSLVTAQVAEHSELNEVWKDILNAEGDEIYIKDIGLYMKEGENPSFTELSERACLRQEVAIGYIKNNKKVINPNPKTEPLSFEMTDSLIVISELEGEQPIVV 829
[Close]
BLAST of g.arboreum_cottongen_reftransV1_0009178 vs. ExPASy TrEMBL
Match: A0A0D2NN06_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_006G070000 PE=4 SV=1)

HSP 1 Score: 201.445 bits (511), Expect = 2.441e-57
Identity = 99/118 (83.90%), Postives = 105/118 (88.98%), Query Frame = 3 
Query:    3 ITRIKPSVTYIAAEEVMSLVTAQVAEHSELNEVWKDILNAEGDEIYVKDINLYMKEGEKLSFSELSERAFLRGEVAIGYIKNNKTVINPTPKSQPLSLETIDLLIVISELEGEQPVVV 356
            ITR KP++TYIAAEEVMSLVTAQVAEHSELNEVWKDILNAEGDEIY+KDI LYMKEGE  SF ELSERA LR EVAIGYIKNNK VINP PK++PLS E  D LIVISELEGEQP+VV
Sbjct:  605 ITRFKPTLTYIAAEEVMSLVTAQVAEHSELNEVWKDILNAEGDEIYIKDIGLYMKEGENPSFMELSERACLRREVAIGYIKNNKKVINPNPKTEPLSFEMTDSLIVISELEGEQPIVV 722
[Close]
BLAST of g.arboreum_cottongen_reftransV1_0009178 vs. ExPASy TrEMBL
Match: I1NIA8_SOYBN (Uncharacterized protein OS=Glycine max PE=4 SV=2)

HSP 1 Score: 202.216 bits (513), Expect = 2.547e-57
Identity = 100/118 (84.75%), Postives = 108/118 (91.53%), Query Frame = 3 
Query:    3 ITRIKPSVTYIAAEEVMSLVTAQVAEHSELNEVWKDILNAEGDEIYVKDINLYMKEGEKLSFSELSERAFLRGEVAIGYIKNNKTVINPTPKSQPLSLETIDLLIVISELEGEQPVVV 356
            I+RIKPSVTYIAAEE+MSLVTAQVAE+SELNEVWKD+LNAEGDEIYVKDI LYMKEGE  SFSELSERA+LR EVAIGY+KN K VINP PKS+PLSLE  D LIVISELEGEQPVV+
Sbjct:  735 ISRIKPSVTYIAAEEIMSLVTAQVAENSELNEVWKDVLNAEGDEIYVKDIGLYMKEGENPSFSELSERAYLRREVAIGYVKNKKNVINPVPKSEPLSLEMTDSLIVISELEGEQPVVL 852
[Close]
BLAST of g.arboreum_cottongen_reftransV1_0009178 vs. ExPASy TrEMBL
Match: A0A0B2PBW5_GLYSO (Putative ion channel POLLUX-like 2 (Fragment) OS=Glycine soja GN=glysoja_013961 PE=4 SV=1)

HSP 1 Score: 201.83 bits (512), Expect = 3.059e-57
Identity = 100/118 (84.75%), Postives = 108/118 (91.53%), Query Frame = 3 
Query:    3 ITRIKPSVTYIAAEEVMSLVTAQVAEHSELNEVWKDILNAEGDEIYVKDINLYMKEGEKLSFSELSERAFLRGEVAIGYIKNNKTVINPTPKSQPLSLETIDLLIVISELEGEQPVVV 356
            I+RIKPSVTYIAAEE+MSLVTAQVAE+SELNEVWKD+LNAEGDEIYVKDI LYMKEGE  SFSELSERA+LR EVAIGY+KN K VINP PKS+PLSLE  D LIVISELEGEQPVV+
Sbjct:  744 ISRIKPSVTYIAAEEIMSLVTAQVAENSELNEVWKDVLNAEGDEIYVKDIGLYMKEGENPSFSELSERAYLRREVAIGYVKNKKNVINPVPKSEPLSLEMTDSLIVISELEGEQPVVL 861
[Close]
BLAST of g.arboreum_cottongen_reftransV1_0009178 vs. ExPASy TrEMBL
Match: A0A0D2NN03_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_006G070000 PE=4 SV=1)

HSP 1 Score: 201.83 bits (512), Expect = 3.119e-57
Identity = 99/118 (83.90%), Postives = 105/118 (88.98%), Query Frame = 3 
Query:    3 ITRIKPSVTYIAAEEVMSLVTAQVAEHSELNEVWKDILNAEGDEIYVKDINLYMKEGEKLSFSELSERAFLRGEVAIGYIKNNKTVINPTPKSQPLSLETIDLLIVISELEGEQPVVV 356
            ITR KP++TYIAAEEVMSLVTAQVAEHSELNEVWKDILNAEGDEIY+KDI LYMKEGE  SF ELSERA LR EVAIGYIKNNK VINP PK++PLS E  D LIVISELEGEQP+VV
Sbjct:  739 ITRFKPTLTYIAAEEVMSLVTAQVAEHSELNEVWKDILNAEGDEIYIKDIGLYMKEGENPSFMELSERACLRREVAIGYIKNNKKVINPNPKTEPLSFEMTDSLIVISELEGEQPIVV 856
[Close]
BLAST of g.arboreum_cottongen_reftransV1_0009178 vs. ExPASy TrEMBL
Match: W9RZB9_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_001672 PE=4 SV=1)

HSP 1 Score: 201.445 bits (511), Expect = 3.186e-57
Identity = 99/118 (83.90%), Postives = 109/118 (92.37%), Query Frame = 3 
Query:    3 ITRIKPSVTYIAAEEVMSLVTAQVAEHSELNEVWKDILNAEGDEIYVKDINLYMKEGEKLSFSELSERAFLRGEVAIGYIKNNKTVINPTPKSQPLSLETIDLLIVISELEGEQPVVV 356
            ITRIKPS+TYIAAEEVMSLVTAQVAE+SELNEVWKDILNAEGDEIYVKDI+LYMK+GE  SFSEL+ERA LR EVAIGY+KNNK VINP PKS+PLSLE  D LIVISELEGEQP+++
Sbjct:  632 ITRIKPSLTYIAAEEVMSLVTAQVAENSELNEVWKDILNAEGDEIYVKDISLYMKKGENPSFSELAERAHLRREVAIGYVKNNKKVINPVPKSEPLSLEITDSLIVISELEGEQPIIL 749
[Close]
BLAST of g.arboreum_cottongen_reftransV1_0009178 vs. ExPASy Swiss-Prot
Match: POLL1_ARATH (Putative ion channel POLLUX-like 1 OS=Arabidopsis thaliana GN=At5g02940 PE=2 SV=1)

HSP 1 Score: 183.726 bits (465), Expect = 9.105e-53
Identity = 91/118 (77.12%), Postives = 105/118 (88.98%), Query Frame = 3 
Query:    3 ITRIKPSVTYIAAEEVMSLVTAQVAEHSELNEVWKDILNAEGDEIYVKDINLYMKEGEKLSFSELSERAFLRGEVAIGYIKNNKTVINPTPKSQPLSLETIDLLIVISELEGEQPVVV 356
            ITR+KPS+T+IAAEEVMSLVTAQVAE+SELNEVWKDIL+AEGDEIYVKDI LYMKEGE  SF+ELSERA+LR EVAIGYIK  K +INP PK++P+SLE  D LIVISELEG+Q + +
Sbjct:  696 ITRLKPSLTFIAAEEVMSLVTAQVAENSELNEVWKDILDAEGDEIYVKDIELYMKEGENPSFTELSERAWLRREVAIGYIKGGKKIINPVPKTEPVSLEMEDSLIVISELEGDQVITL 813
[Close]
BLAST of g.arboreum_cottongen_reftransV1_0009178 vs. ExPASy Swiss-Prot
Match: POLL2_ARATH (Putative ion channel POLLUX-like 2 OS=Arabidopsis thaliana GN=At5g43745 PE=2 SV=1)

HSP 1 Score: 183.726 bits (465), Expect = 1.085e-52
Identity = 90/118 (76.27%), Postives = 105/118 (88.98%), Query Frame = 3 
Query:    3 ITRIKPSVTYIAAEEVMSLVTAQVAEHSELNEVWKDILNAEGDEIYVKDINLYMKEGEKLSFSELSERAFLRGEVAIGYIKNNKTVINPTPKSQPLSLETIDLLIVISELEGEQPVVV 356
            IT +KPS+T+IAAEEVMSLVTAQVAE+SELNEVWKDIL+A+GDEIYVKD+ LYMKEGE  SF+ELSERA+LR EVAIGYIK  K +INP PK++PLSLE  D LIVISELEG+QP+ +
Sbjct:  700 ITGLKPSLTFIAAEEVMSLVTAQVAENSELNEVWKDILDADGDEIYVKDVELYMKEGENPSFTELSERAWLRREVAIGYIKGGKKMINPVPKNEPLSLEMDDSLIVISELEGDQPITL 817
[Close]
BLAST of g.arboreum_cottongen_reftransV1_0009178 vs. ExPASy Swiss-Prot
Match: CASTO_LOTJA (Ion channel CASTOR OS=Lotus japonicus GN=CASTOR PE=1 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 1.535e-13
Identity = 37/104 (35.58%), Postives = 66/104 (63.46%), Query Frame = 3 
Query:   30 YIAAEEVMSLVTAQVAEHSELNEVWKDILNAEGDEIYVKDINLYMKEGEKLSFSELSERAFLRGEVAIGYIKNN--KTVINPTPKSQPLSLETIDLLIVISELE 335
            Y+ + E++S+  A VAE  ++N+V +++   EG+E++++  ++Y++EGE++SF E+  RA  R E+ IGY   N  + VINP  K+        D+ +VI+E E
Sbjct:  750 YVLSNELVSMALAMVAEDRQINDVLEELFAEEGNEMHIRQADIYLREGEEMSFYEIMLRARQRREILIGYRLANAERAVINPPAKTGRRKWSLKDVFVVITEKE 853
[Close]
BLAST of g.arboreum_cottongen_reftransV1_0009178 vs. ExPASy Swiss-Prot
Match: CASTO_ORYSJ (Probable ion channel CASTOR OS=Oryza sativa subsp. japonica GN=Os03g0843600 PE=2 SV=1)

HSP 1 Score: 64.3142 bits (155), Expect = 5.717e-11
Identity = 33/104 (31.73%), Postives = 62/104 (59.62%), Query Frame = 3 
Query:   30 YIAAEEVMSLVTAQVAEHSELNEVWKDILNAEGDEIYVKDINLYMKEGEKLSFSELSERAFLRGEVAIGY--IKNNKTVINPTPKSQPLSLETIDLLIVISELE 335
            Y+ + E++S+  A VAE  ++N+V +++   +G+E+ ++  +LY++E E+L+F E+  R   R E+ IGY  +   + +INP  K         D+ +VI+E E
Sbjct:  790 YVLSNELVSMALAMVAEDRQINDVLEELFAEQGNEMQIRPADLYLREDEELNFFEVMLRGRQRKEIVIGYRLVDAERAIINPPDKVSRRRWSAKDVFVVITEKE 893
[Close]
BLAST of g.arboreum_cottongen_reftransV1_0009178 vs. ExPASy Swiss-Prot
Match: POLLU_ORYSJ (Probable ion channel POLLUX OS=Oryza sativa subsp. japonica GN=Os01g0870100 PE=2 SV=1)

HSP 1 Score: 64.3142 bits (155), Expect = 6.791e-11
Identity = 35/102 (34.31%), Postives = 61/102 (59.80%), Query Frame = 3 
Query:   30 YIAAEEVMSLVTAQVAEHSELNEVWKDILNAEGDEIYVKDINLYMKEGEKLSFSELSERAFLRGEVAIGY--IKNNKTVINPTPKSQPLSLETIDLLIVISE 329
            Y+ + E++S+  A VAE  ++N V +++   EG+E+ ++    Y+ E E+LSF ++  RA  R EV IGY    +++ +INP  KS+       D+ +VIS+
Sbjct:  840 YVLSNELVSMALAMVAEDKQINRVLEELFAEEGNEMCIRSAEFYLYEQEELSFFDIMVRARERDEVVIGYRLANDDQAIINPEQKSEIRKWSLDDVFVVISK 941
[Close]
BLAST of g.arboreum_cottongen_reftransV1_0009178 vs. ExPASy Swiss-Prot
Match: DMI1_MEDTR (Ion channel DMI1 OS=Medicago truncatula GN=DMI1 PE=2 SV=1)

HSP 1 Score: 61.6178 bits (148), Expect = 4.300e-10
Identity = 33/104 (31.73%), Postives = 59/104 (56.73%), Query Frame = 3 
Query:   30 YIAAEEVMSLVTAQVAEHSELNEVWKDILNAEGDEIYVKDINLYMKEGEKLSFSELSERAFLRGEVAIGYIKNN--KTVINPTPKSQPLSLETIDLLIVISELE 335
            Y+ + E++S+  A VAE  ++N V +++   EG+E+ +K    Y+ + E+L F ++  R   R E+ IGY   N  + +INP+ KS P      D+ +V++  E
Sbjct:  779 YVLSNELVSMALAMVAEDKQINRVLEELFAEEGNEMCIKPAEFYLFDQEELCFYDIMIRGRTRKEIVIGYRLANQERAIINPSEKSVPRKWSLDDVFVVLASGE 882
[Close]
BLAST of g.arboreum_cottongen_reftransV1_0009178 vs. ExPASy Swiss-Prot
Match: POLLU_ARATH (Probable ion channel POLLUX OS=Arabidopsis thaliana GN=At5g49960 PE=2 SV=1)

HSP 1 Score: 60.4622 bits (145), Expect = 1.148e-9
Identity = 32/101 (31.68%), Postives = 58/101 (57.43%), Query Frame = 3 
Query:   30 YIAAEEVMSLVTAQVAEHSELNEVWKDILNAEGDEIYVKDINLYMKEGEKLSFSELSERAFLRGEVAIGY--IKNNKTVINPTPKSQPLSLETIDLLIVIS 326
            Y+ + E++S+  A VAE  ++N V K++   +G+E+ ++    Y+ + E++ F ++  RA  R E+ IGY      + VINPT KS+       D+ +VI+
Sbjct:  721 YVLSNELVSMALAMVAEDKQINRVLKELFAEKGNELCIRPAEFYIYDQEEVCFYDIMRRARQRQEIIIGYRLAGMEQAVINPTDKSKLTKWSLDDVFVVIA 821
[Close]
BLAST of g.arboreum_cottongen_reftransV1_0009178 vs. ExPASy Swiss-Prot
Match: SYM8_PEA (Probable ion channel SYM8 OS=Pisum sativum GN=SYM8 PE=1 SV=3)

HSP 1 Score: 58.5362 bits (140), Expect = 4.016e-9
Identity = 32/104 (30.77%), Postives = 57/104 (54.81%), Query Frame = 3 
Query:   30 YIAAEEVMSLVTAQVAEHSELNEVWKDILNAEGDEIYVKDINLYMKEGEKLSFSELSERAFLRGEVAIGY--IKNNKTVINPTPKSQPLSLETIDLLIVISELE 335
            Y+ + E++S+  A VAE  ++N V +++   EG+E+ +K    Y+ + E+L F ++  R   R E+ IGY      + +INP+ KS        D+ +VI+  E
Sbjct:  791 YVLSNELVSMALAMVAEDKQINRVLEELFAEEGNEMCIKPAEFYLFDQEELCFYDIMIRGRTRKEIVIGYRLASQERALINPSEKSMTRKWSLDDVFVVIASGE 894
[Close]
BLAST of g.arboreum_cottongen_reftransV1_0009178 vs. ExPASy Swiss-Prot
Match: POLLU_LOTJA (Ion channel POLLUX OS=Lotus japonicus GN=POLLUX PE=1 SV=1)

HSP 1 Score: 55.0694 bits (131), Expect = 6.496e-8
Identity = 30/101 (29.70%), Postives = 56/101 (55.45%), Query Frame = 3 
Query:   30 YIAAEEVMSLVTAQVAEHSELNEVWKDILNAEGDEIYVKDINLYMKEGEKLSFSELSERAFLRGEVAIGYIKNN--KTVINPTPKSQPLSLETIDLLIVIS 326
            Y+ + E++S+  A VAE  ++N V +++   +G+E+ +K    Y+ + E+L F ++  R   R E+ IGY   N  + +INP+ K         D+ +VI+
Sbjct:  814 YVLSNELVSMALAMVAEDKQINRVLEELFAEQGNEMCIKPAEFYLFDQEELCFYDIMIRGRARQEIIIGYRLANQERAIINPSEKLVARKWSLGDVFVVIA 914
The following BLAST results are available for this feature:
BLAST of g.arboreum_cottongen_reftransV1_0009178 vs. ExPASy TrEMBL
Analysis Date: 2016-11-15 (Homology Analysis for Gossypium arboreum CottonGen RefTrans V1 vs TrEMBL)
Total hits: 25
Match NameE-valueIdentityDescription
A0A0B0PV49_GOSAR1.503e-6999.15Uncharacterized protein OS=Gossypium arboreum GN=F... [more]
A0A061ELE5_THECC4.590e-6088.14Uncharacterized protein isoform 2 OS=Theobroma cac... [more]
A0A061EUA6_THECC5.330e-5988.14Uncharacterized protein isoform 1 OS=Theobroma cac... [more]
W9RIN4_9ROSA7.469e-5883.90Uncharacterized protein OS=Morus notabilis GN=L484... [more]
A0A0B0PTI5_GOSAR1.137e-5783.90Uncharacterized protein OS=Gossypium arboreum GN=F... [more]
A0A0D2NN06_GOSRA2.441e-5783.90Uncharacterized protein OS=Gossypium raimondii GN=... [more]
I1NIA8_SOYBN2.547e-5784.75Uncharacterized protein OS=Glycine max PE=4 SV=2[more]
A0A0B2PBW5_GLYSO3.059e-5784.75Putative ion channel POLLUX-like 2 (Fragment) OS=G... [more]
A0A0D2NN03_GOSRA3.119e-5783.90Uncharacterized protein OS=Gossypium raimondii GN=... [more]
W9RZB9_9ROSA3.186e-5783.90Uncharacterized protein OS=Morus notabilis GN=L484... [more]

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BLAST of g.arboreum_cottongen_reftransV1_0009178 vs. ExPASy Swiss-Prot
Analysis Date: 2016-11-15 (Homology Analysis for Gossypium arboreum CottonGen RefTrans V1 vs SwissProt)
Total hits: 9
Match NameE-valueIdentityDescription
POLL1_ARATH9.105e-5377.12Putative ion channel POLLUX-like 1 OS=Arabidopsis ... [more]
POLL2_ARATH1.085e-5276.27Putative ion channel POLLUX-like 2 OS=Arabidopsis ... [more]
CASTO_LOTJA1.535e-1335.58Ion channel CASTOR OS=Lotus japonicus GN=CASTOR PE... [more]
CASTO_ORYSJ5.717e-1131.73Probable ion channel CASTOR OS=Oryza sativa subsp.... [more]
POLLU_ORYSJ6.791e-1134.31Probable ion channel POLLUX OS=Oryza sativa subsp.... [more]
DMI1_MEDTR4.300e-1031.73Ion channel DMI1 OS=Medicago truncatula GN=DMI1 PE... [more]
POLLU_ARATH1.148e-931.68Probable ion channel POLLUX OS=Arabidopsis thalian... [more]
SYM8_PEA4.016e-930.77Probable ion channel SYM8 OS=Pisum sativum GN=SYM8... [more]
POLLU_LOTJA6.496e-829.70Ion channel POLLUX OS=Lotus japonicus GN=POLLUX PE... [more]
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InterPro
Analysis Name: InterProScan analysis for Gossypium arboreum CottonGen RefTrans V1
Date Performed: 2016-11-14
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR31563:SF2ION CHANNEL POLLUX-LIKE 1-RELATEDcoord: 1..98
NoneNo IPR availablePANTHERPTHR31563FAMILY NOT NAMEDcoord: 1..98

Sequences
The following sequences are available for this feature:

contig sequence

>g.arboreum_cottongen_reftransV1_0009178 ID=g.arboreum_cottongen_reftransV1_0009178; Name=g.arboreum_cottongen_reftransV1_0009178; organism=Gossypium arboreum; type=contig; length=501bp
AAATTACAAGAATCAAGCCATCCGTGACTTATATTGCGGCTGAGGAAGTG
ATGAGTCTTGTAACGGCTCAAGTCGCTGAACACAGTGAGCTGAATGAGGT
GTGGAAAGACATTTTAAATGCTGAAGGTGATGAAATATATGTAAAGGATA
TAAACCTATACATGAAAGAAGGGGAGAAGCTGTCGTTCTCAGAGCTATCC
GAAAGGGCATTTTTGCGAGGAGAAGTTGCAATAGGATATATCAAAAACAA
CAAAACTGTTATTAACCCAACTCCCAAGTCACAACCTCTGTCCCTAGAAA
CGATAGATTTACTAATTGTTATATCAGAGCTGGAAGGAGAGCAACCTGTT
GTTGTCTGAATACTAAATACATCATCCTTGCTTGTTTATCTTTTCAGTCT
CATAGTGAGGATTAGAGATTGAGAGAAACTTCTTGAATTTGCTGACTAGT
GAAATTTAGAATTGTTGTTTGAAGAAAATGTAGTATTTTATGATTGTAAA
T
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