g.arboreum_cottongen_reftransV1_0022117, g.arboreum_cottongen_reftransV1_0022117 (contig) Gossypium arboreum
Overview
Alignments
The following features are aligned
Analyses
This contig is derived from or has results from the following analyses
Homology
BLAST of g.arboreum_cottongen_reftransV1_0022117 vs. ExPASy TrEMBL
Match: A0A0B0MRE3_GOSAR (Histidine--tRNA ligase OS=Gossypium arboreum GN=F383_04889 PE=4 SV=1) HSP 1 Score: 1253.43 bits (3242), Expect = 0.000e+0 Identity = 624/624 (100.00%), Postives = 624/624 (100.00%), Query Frame = 2 Query: 2 PEVKNDVEEVMSVKHLTMKKRVICELQNQQVNPKLVGHAKKKSSRFRARGCKAAIEGYSQPSERNMAEKPSNNNLVSVTEASDNDVSTSNGGNHSCKNIGGKKHGHQTEINLRVEAFVNQKLTDGENLTINEVANRPNDFIEALEVLNSNKELFMKLLQDPNSLLVKHIQDLRDSQTENQPPQSSSNAKTSQCQPKGAEECEGSVDAEMVISKGSDMPQSSNATVVLKSGKQSYPDKISNWPSPPSSHSLRKKEKSVRQTFLSFEHMKKKLRHAMRVNKKEHRQMSLDDIRKSLHEFKQIKDDIKETSRRANESISSSKSYHDVGKMSEFFREVNRRDGIGQTENIVTGIGSKAASSTESCHRTSNMTQRYLNGKFHPSKHLSDMLNRGNEDLSRQQKLRTLMSLPPYDLLPRPAPVRDKEHRFASPQMRFSPYNNYSTVNGYKWRVQKEKKSSYLISPINTLGTQLVSDNKKPDNQLQNAKKSINGDLSPATKVIRTVYSVSDDFSHKGNETSVCPGKVMEEHHAVMWDECKSNALGVILEPNGVQKSDMTQRTEPNSPSGDRTXXXXXXXXXXXXXXXQRAENSDSAGDREEQPSPVSVLEQFFVEESVNSPSTVSLAAEPL 1873 PEVKNDVEEVMSVKHLTMKKRVICELQNQQVNPKLVGHAKKKSSRFRARGCKAAIEGYSQPSERNMAEKPSNNNLVSVTEASDNDVSTSNGGNHSCKNIGGKKHGHQTEINLRVEAFVNQKLTDGENLTINEVANRPNDFIEALEVLNSNKELFMKLLQDPNSLLVKHIQDLRDSQTENQPPQSSSNAKTSQCQPKGAEECEGSVDAEMVISKGSDMPQSSNATVVLKSGKQSYPDKISNWPSPPSSHSLRKKEKSVRQTFLSFEHMKKKLRHAMRVNKKEHRQMSLDDIRKSLHEFKQIKDDIKETSRRANESISSSKSYHDVGKMSEFFREVNRRDGIGQTENIVTGIGSKAASSTESCHRTSNMTQRYLNGKFHPSKHLSDMLNRGNEDLSRQQKLRTLMSLPPYDLLPRPAPVRDKEHRFASPQMRFSPYNNYSTVNGYKWRVQKEKKSSYLISPINTLGTQLVSDNKKPDNQLQNAKKSINGDLSPATKVIRTVYSVSDDFSHKGNETSVCPGKVMEEHHAVMWDECKSNALGVILEPNGVQKSDMTQRTEPNSPSGDRTSPWSIDVYSSSPSSIQRAENSDSAGDREEQPSPVSVLEQFFVEESVNSPSTVSLAAEPL Sbjct: 93 PEVKNDVEEVMSVKHLTMKKRVICELQNQQVNPKLVGHAKKKSSRFRARGCKAAIEGYSQPSERNMAEKPSNNNLVSVTEASDNDVSTSNGGNHSCKNIGGKKHGHQTEINLRVEAFVNQKLTDGENLTINEVANRPNDFIEALEVLNSNKELFMKLLQDPNSLLVKHIQDLRDSQTENQPPQSSSNAKTSQCQPKGAEECEGSVDAEMVISKGSDMPQSSNATVVLKSGKQSYPDKISNWPSPPSSHSLRKKEKSVRQTFLSFEHMKKKLRHAMRVNKKEHRQMSLDDIRKSLHEFKQIKDDIKETSRRANESISSSKSYHDVGKMSEFFREVNRRDGIGQTENIVTGIGSKAASSTESCHRTSNMTQRYLNGKFHPSKHLSDMLNRGNEDLSRQQKLRTLMSLPPYDLLPRPAPVRDKEHRFASPQMRFSPYNNYSTVNGYKWRVQKEKKSSYLISPINTLGTQLVSDNKKPDNQLQNAKKSINGDLSPATKVIRTVYSVSDDFSHKGNETSVCPGKVMEEHHAVMWDECKSNALGVILEPNGVQKSDMTQRTEPNSPSGDRTSPWSIDVYSSSPSSIQRAENSDSAGDREEQPSPVSVLEQFFVEESVNSPSTVSLAAEPL 716
BLAST of g.arboreum_cottongen_reftransV1_0022117 vs. ExPASy TrEMBL
Match: A0A0D2U955_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_008G247100 PE=4 SV=1) HSP 1 Score: 1207.59 bits (3123), Expect = 0.000e+0 Identity = 604/623 (96.95%), Postives = 609/623 (97.75%), Query Frame = 2 Query: 5 EVKNDVEEVMSVKHLTMKKRVICELQNQQVNPKLVGHAKKKSSRFRARGCKAAIEGYSQPSERNMAEKPSNNNLVSVTEASDNDVSTSNGGNHSCKNIGGKKHGHQTEINLRVEAFVNQKLTDGENLTINEVANRPNDFIEALEVLNSNKELFMKLLQDPNSLLVKHIQDLRDSQTENQPPQSSSNAKTSQCQPKGAEECEGSVDAEMVISKGSDMPQSSNATVVLKSGKQSYPDKISNWPSPPSSHSLRKKEKSVRQTFLSFEHMKKKLRHAMRVNKKEHRQMSLDDIRKSLHEFKQIKDDIKETSRRANESISSSKSYHDVGKMSEFFREVNRRDGIGQTENIVTGIGSKAASSTESCHRTSNM-TQRYLNGKFHPSKHLSDMLNRGNEDLSRQQKLRTLMSLPPYDLLPRPAPVRDKEHRFASPQMRFSPYNNYSTVNGYKWRVQKEKKSSYLISPINTLGTQLVSDNKKPDNQLQNAKKSINGDLSPATKVIRTVYSVSDDFSHKGNETSVCPGKVMEEHHAVMWDECKSNALGVILEPNGVQKSDMTQRTEPNSPSGDRTXXXXXXXXXXXXXXXQRAENSDSAGDREEQPSPVSVLEQFFVEESVNSPSTVSLAAEP 1870 EVKNDVEEVMSVKHLTMKKRVICELQNQQVNPKLVGH+KKKSSRFRARGCKAAIEGYSQPSERN AEKPSNNNLVSVTEASDNDVSTSNGGNHSCKNIGGKKHGHQTEINLRVEAFVNQKLTDGENLTINEVANRPNDFIEALEVLNSNKELFMKLLQDPNSLLVKHIQDLRDSQTENQPPQSSSNAKTSQCQPKGAEECEGSVDAEMVISKGSDMPQ+S ATVVLKSGKQSYPDKISNWPSPPSSHSLRKKEKSVRQTFLSFEHMKKKLRHAM+VNKKEHRQMSLDDIRKSLHEFKQ KDDIKETSRRANESISSSKSY DVGKMSEFFREVNRRDGIGQTENIVTGIGSKAASSTESCHRTSNM TQRYLNGKFHPS+HLSDMLNRGNEDLSRQQKLRTL SLP YDLLPR APVRDKEHRFASPQMRFSPYNNYSTVNGYKWRVQKE KSSYLISPINTLGTQLVSDNKKPDNQLQNAKKSINGDLSPATKV+RTVYSVSDDFSHKGNETSVCPGKVME HHAVMWDECKSNALGVI EPNGVQ SDMTQRTEPNSPSGDRTS WSIDVYSSSPSSIQRAENSDS GDREEQPSPVSVLEQFFVEESVNSPSTVSLAAEP Sbjct: 42 EVKNDVEEVMSVKHLTMKKRVICELQNQQVNPKLVGHSKKKSSRFRARGCKAAIEGYSQPSERNTAEKPSNNNLVSVTEASDNDVSTSNGGNHSCKNIGGKKHGHQTEINLRVEAFVNQKLTDGENLTINEVANRPNDFIEALEVLNSNKELFMKLLQDPNSLLVKHIQDLRDSQTENQPPQSSSNAKTSQCQPKGAEECEGSVDAEMVISKGSDMPQTSYATVVLKSGKQSYPDKISNWPSPPSSHSLRKKEKSVRQTFLSFEHMKKKLRHAMKVNKKEHRQMSLDDIRKSLHEFKQFKDDIKETSRRANESISSSKSYQDVGKMSEFFREVNRRDGIGQTENIVTGIGSKAASSTESCHRTSNMLTQRYLNGKFHPSEHLSDMLNRGNEDLSRQQKLRTLTSLPQYDLLPRLAPVRDKEHRFASPQMRFSPYNNYSTVNGYKWRVQKE-KSSYLISPINTLGTQLVSDNKKPDNQLQNAKKSINGDLSPATKVLRTVYSVSDDFSHKGNETSVCPGKVMEGHHAVMWDECKSNALGVISEPNGVQNSDMTQRTEPNSPSGDRTSSWSIDVYSSSPSSIQRAENSDSTGDREEQPSPVSVLEQFFVEESVNSPSTVSLAAEP 663
BLAST of g.arboreum_cottongen_reftransV1_0022117 vs. ExPASy TrEMBL
Match: A0A0D2RLP4_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_008G247100 PE=4 SV=1) HSP 1 Score: 1207.59 bits (3123), Expect = 0.000e+0 Identity = 604/623 (96.95%), Postives = 609/623 (97.75%), Query Frame = 2 Query: 5 EVKNDVEEVMSVKHLTMKKRVICELQNQQVNPKLVGHAKKKSSRFRARGCKAAIEGYSQPSERNMAEKPSNNNLVSVTEASDNDVSTSNGGNHSCKNIGGKKHGHQTEINLRVEAFVNQKLTDGENLTINEVANRPNDFIEALEVLNSNKELFMKLLQDPNSLLVKHIQDLRDSQTENQPPQSSSNAKTSQCQPKGAEECEGSVDAEMVISKGSDMPQSSNATVVLKSGKQSYPDKISNWPSPPSSHSLRKKEKSVRQTFLSFEHMKKKLRHAMRVNKKEHRQMSLDDIRKSLHEFKQIKDDIKETSRRANESISSSKSYHDVGKMSEFFREVNRRDGIGQTENIVTGIGSKAASSTESCHRTSNM-TQRYLNGKFHPSKHLSDMLNRGNEDLSRQQKLRTLMSLPPYDLLPRPAPVRDKEHRFASPQMRFSPYNNYSTVNGYKWRVQKEKKSSYLISPINTLGTQLVSDNKKPDNQLQNAKKSINGDLSPATKVIRTVYSVSDDFSHKGNETSVCPGKVMEEHHAVMWDECKSNALGVILEPNGVQKSDMTQRTEPNSPSGDRTXXXXXXXXXXXXXXXQRAENSDSAGDREEQPSPVSVLEQFFVEESVNSPSTVSLAAEP 1870 EVKNDVEEVMSVKHLTMKKRVICELQNQQVNPKLVGH+KKKSSRFRARGCKAAIEGYSQPSERN AEKPSNNNLVSVTEASDNDVSTSNGGNHSCKNIGGKKHGHQTEINLRVEAFVNQKLTDGENLTINEVANRPNDFIEALEVLNSNKELFMKLLQDPNSLLVKHIQDLRDSQTENQPPQSSSNAKTSQCQPKGAEECEGSVDAEMVISKGSDMPQ+S ATVVLKSGKQSYPDKISNWPSPPSSHSLRKKEKSVRQTFLSFEHMKKKLRHAM+VNKKEHRQMSLDDIRKSLHEFKQ KDDIKETSRRANESISSSKSY DVGKMSEFFREVNRRDGIGQTENIVTGIGSKAASSTESCHRTSNM TQRYLNGKFHPS+HLSDMLNRGNEDLSRQQKLRTL SLP YDLLPR APVRDKEHRFASPQMRFSPYNNYSTVNGYKWRVQKE KSSYLISPINTLGTQLVSDNKKPDNQLQNAKKSINGDLSPATKV+RTVYSVSDDFSHKGNETSVCPGKVME HHAVMWDECKSNALGVI EPNGVQ SDMTQRTEPNSPSGDRTS WSIDVYSSSPSSIQRAENSDS GDREEQPSPVSVLEQFFVEESVNSPSTVSLAAEP Sbjct: 60 EVKNDVEEVMSVKHLTMKKRVICELQNQQVNPKLVGHSKKKSSRFRARGCKAAIEGYSQPSERNTAEKPSNNNLVSVTEASDNDVSTSNGGNHSCKNIGGKKHGHQTEINLRVEAFVNQKLTDGENLTINEVANRPNDFIEALEVLNSNKELFMKLLQDPNSLLVKHIQDLRDSQTENQPPQSSSNAKTSQCQPKGAEECEGSVDAEMVISKGSDMPQTSYATVVLKSGKQSYPDKISNWPSPPSSHSLRKKEKSVRQTFLSFEHMKKKLRHAMKVNKKEHRQMSLDDIRKSLHEFKQFKDDIKETSRRANESISSSKSYQDVGKMSEFFREVNRRDGIGQTENIVTGIGSKAASSTESCHRTSNMLTQRYLNGKFHPSEHLSDMLNRGNEDLSRQQKLRTLTSLPQYDLLPRLAPVRDKEHRFASPQMRFSPYNNYSTVNGYKWRVQKE-KSSYLISPINTLGTQLVSDNKKPDNQLQNAKKSINGDLSPATKVLRTVYSVSDDFSHKGNETSVCPGKVMEGHHAVMWDECKSNALGVISEPNGVQNSDMTQRTEPNSPSGDRTSSWSIDVYSSSPSSIQRAENSDSTGDREEQPSPVSVLEQFFVEESVNSPSTVSLAAEP 681
BLAST of g.arboreum_cottongen_reftransV1_0022117 vs. ExPASy TrEMBL
Match: A0A0D2TC77_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_008G247100 PE=4 SV=1) HSP 1 Score: 1206.43 bits (3120), Expect = 0.000e+0 Identity = 604/623 (96.95%), Postives = 609/623 (97.75%), Query Frame = 2 Query: 5 EVKNDVEEVMSVKHLTMKKRVICELQNQQVNPKLVGHAKKKSSRFRARGCKAAIEGYSQPSERNMAEKPSNNNLVSVTEASDNDVSTSNGGNHSCKNIGGKKHGHQTEINLRVEAFVNQKLTDGENLTINEVANRPNDFIEALEVLNSNKELFMKLLQDPNSLLVKHIQDLRDSQTENQPPQSSSNAKTSQCQPKGAEECEGSVDAEMVISKGSDMPQSSNATVVLKSGKQSYPDKISNWPSPPSSHSLRKKEKSVRQTFLSFEHMKKKLRHAMRVNKKEHRQMSLDDIRKSLHEFKQIKDDIKETSRRANESISSSKSYHDVGKMSEFFREVNRRDGIGQTENIVTGIGSKAASSTESCHRTSNM-TQRYLNGKFHPSKHLSDMLNRGNEDLSRQQKLRTLMSLPPYDLLPRPAPVRDKEHRFASPQMRFSPYNNYSTVNGYKWRVQKEKKSSYLISPINTLGTQLVSDNKKPDNQLQNAKKSINGDLSPATKVIRTVYSVSDDFSHKGNETSVCPGKVMEEHHAVMWDECKSNALGVILEPNGVQKSDMTQRTEPNSPSGDRTXXXXXXXXXXXXXXXQRAENSDSAGDREEQPSPVSVLEQFFVEESVNSPSTVSLAAEP 1870 EVKNDVEEVMSVKHLTMKKRVICELQNQQVNPKLVGH+KKKSSRFRARGCKAAIEGYSQPSERN AEKPSNNNLVSVTEASDNDVSTSNGGNHSCKNIGGKKHGHQTEINLRVEAFVNQKLTDGENLTINEVANRPNDFIEALEVLNSNKELFMKLLQDPNSLLVKHIQDLRDSQTENQPPQSSSNAKTSQCQPKGAEECEGSVDAEMVISKGSDMPQ+S ATVVLKSGKQSYPDKISNWPSPPSSHSLRKKEKSVRQTFLSFEHMKKKLRHAM+VNKKEHRQMSLDDIRKSLHEFKQ KDDIKETSRRANESISSSKSY DVGKMSEFFREVNRRDGIGQTENIVTGIGSKAASSTESCHRTSNM TQRYLNGKFHPS+HLSDMLNRGNEDLSRQQKLRTL SLP YDLLPR APVRDKEHRFASPQMRFSPYNNYSTVNGYKWRVQKE KSSYLISPINTLGTQLVSDNKKPDNQLQNAKKSINGDLSPATKV+RTVYSVSDDFSHKGNETSVCPGKVME HHAVMWDECKSNALGVI EPNGVQ SDMTQRTEPNSPSGDRTS WSIDVYSSSPSSIQRAENSDS GDREEQPSPVSVLEQFFVEESVNSPSTVSLAAEP Sbjct: 50 EVKNDVEEVMSVKHLTMKKRVICELQNQQVNPKLVGHSKKKSSRFRARGCKAAIEGYSQPSERNTAEKPSNNNLVSVTEASDNDVSTSNGGNHSCKNIGGKKHGHQTEINLRVEAFVNQKLTDGENLTINEVANRPNDFIEALEVLNSNKELFMKLLQDPNSLLVKHIQDLRDSQTENQPPQSSSNAKTSQCQPKGAEECEGSVDAEMVISKGSDMPQTSYATVVLKSGKQSYPDKISNWPSPPSSHSLRKKEKSVRQTFLSFEHMKKKLRHAMKVNKKEHRQMSLDDIRKSLHEFKQFKDDIKETSRRANESISSSKSYQDVGKMSEFFREVNRRDGIGQTENIVTGIGSKAASSTESCHRTSNMLTQRYLNGKFHPSEHLSDMLNRGNEDLSRQQKLRTLTSLPQYDLLPRLAPVRDKEHRFASPQMRFSPYNNYSTVNGYKWRVQKE-KSSYLISPINTLGTQLVSDNKKPDNQLQNAKKSINGDLSPATKVLRTVYSVSDDFSHKGNETSVCPGKVMEGHHAVMWDECKSNALGVISEPNGVQNSDMTQRTEPNSPSGDRTSSWSIDVYSSSPSSIQRAENSDSTGDREEQPSPVSVLEQFFVEESVNSPSTVSLAAEP 671
BLAST of g.arboreum_cottongen_reftransV1_0022117 vs. ExPASy TrEMBL
Match: A0A0D2T6C5_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_008G247100 PE=4 SV=1) HSP 1 Score: 1205.66 bits (3118), Expect = 0.000e+0 Identity = 604/623 (96.95%), Postives = 609/623 (97.75%), Query Frame = 2 Query: 5 EVKNDVEEVMSVKHLTMKKRVICELQNQQVNPKLVGHAKKKSSRFRARGCKAAIEGYSQPSERNMAEKPSNNNLVSVTEASDNDVSTSNGGNHSCKNIGGKKHGHQTEINLRVEAFVNQKLTDGENLTINEVANRPNDFIEALEVLNSNKELFMKLLQDPNSLLVKHIQDLRDSQTENQPPQSSSNAKTSQCQPKGAEECEGSVDAEMVISKGSDMPQSSNATVVLKSGKQSYPDKISNWPSPPSSHSLRKKEKSVRQTFLSFEHMKKKLRHAMRVNKKEHRQMSLDDIRKSLHEFKQIKDDIKETSRRANESISSSKSYHDVGKMSEFFREVNRRDGIGQTENIVTGIGSKAASSTESCHRTSNM-TQRYLNGKFHPSKHLSDMLNRGNEDLSRQQKLRTLMSLPPYDLLPRPAPVRDKEHRFASPQMRFSPYNNYSTVNGYKWRVQKEKKSSYLISPINTLGTQLVSDNKKPDNQLQNAKKSINGDLSPATKVIRTVYSVSDDFSHKGNETSVCPGKVMEEHHAVMWDECKSNALGVILEPNGVQKSDMTQRTEPNSPSGDRTXXXXXXXXXXXXXXXQRAENSDSAGDREEQPSPVSVLEQFFVEESVNSPSTVSLAAEP 1870 EVKNDVEEVMSVKHLTMKKRVICELQNQQVNPKLVGH+KKKSSRFRARGCKAAIEGYSQPSERN AEKPSNNNLVSVTEASDNDVSTSNGGNHSCKNIGGKKHGHQTEINLRVEAFVNQKLTDGENLTINEVANRPNDFIEALEVLNSNKELFMKLLQDPNSLLVKHIQDLRDSQTENQPPQSSSNAKTSQCQPKGAEECEGSVDAEMVISKGSDMPQ+S ATVVLKSGKQSYPDKISNWPSPPSSHSLRKKEKSVRQTFLSFEHMKKKLRHAM+VNKKEHRQMSLDDIRKSLHEFKQ KDDIKETSRRANESISSSKSY DVGKMSEFFREVNRRDGIGQTENIVTGIGSKAASSTESCHRTSNM TQRYLNGKFHPS+HLSDMLNRGNEDLSRQQKLRTL SLP YDLLPR APVRDKEHRFASPQMRFSPYNNYSTVNGYKWRVQKE KSSYLISPINTLGTQLVSDNKKPDNQLQNAKKSINGDLSPATKV+RTVYSVSDDFSHKGNETSVCPGKVME HHAVMWDECKSNALGVI EPNGVQ SDMTQRTEPNSPSGDRTS WSIDVYSSSPSSIQRAENSDS GDREEQPSPVSVLEQFFVEESVNSPSTVSLAAEP Sbjct: 100 EVKNDVEEVMSVKHLTMKKRVICELQNQQVNPKLVGHSKKKSSRFRARGCKAAIEGYSQPSERNTAEKPSNNNLVSVTEASDNDVSTSNGGNHSCKNIGGKKHGHQTEINLRVEAFVNQKLTDGENLTINEVANRPNDFIEALEVLNSNKELFMKLLQDPNSLLVKHIQDLRDSQTENQPPQSSSNAKTSQCQPKGAEECEGSVDAEMVISKGSDMPQTSYATVVLKSGKQSYPDKISNWPSPPSSHSLRKKEKSVRQTFLSFEHMKKKLRHAMKVNKKEHRQMSLDDIRKSLHEFKQFKDDIKETSRRANESISSSKSYQDVGKMSEFFREVNRRDGIGQTENIVTGIGSKAASSTESCHRTSNMLTQRYLNGKFHPSEHLSDMLNRGNEDLSRQQKLRTLTSLPQYDLLPRLAPVRDKEHRFASPQMRFSPYNNYSTVNGYKWRVQKE-KSSYLISPINTLGTQLVSDNKKPDNQLQNAKKSINGDLSPATKVLRTVYSVSDDFSHKGNETSVCPGKVMEGHHAVMWDECKSNALGVISEPNGVQNSDMTQRTEPNSPSGDRTSSWSIDVYSSSPSSIQRAENSDSTGDREEQPSPVSVLEQFFVEESVNSPSTVSLAAEP 721
BLAST of g.arboreum_cottongen_reftransV1_0022117 vs. ExPASy TrEMBL
Match: A0A0D2TC72_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_008G247100 PE=4 SV=1) HSP 1 Score: 1100.5 bits (2845), Expect = 0.000e+0 Identity = 563/622 (90.51%), Postives = 567/622 (91.16%), Query Frame = 2 Query: 5 EVKNDVEEVMSVKHLTMKKRVICELQNQQVNPKLVGHAKKKSSRFRARGCKAAIEGYSQPSERNMAEKPSNNNLVSVTEASDNDVSTSNGGNHSCKNIGGKKHGHQTEINLRVEAFVNQKLTDGENLTINEVANRPNDFIEALEVLNSNKELFMKLLQDPNSLLVKHIQDLRDSQTENQPPQSSSNAKTSQCQPKGAEECEGSVDAEMVISKGSDMPQSSNATVVLKSGKQSYPDKISNWPSPPSSHSLRKKEKSVRQTFLSFEHMKKKLRHAMRVNKKEHRQMSLDDIRKSLHEFKQIKDDIKETSRRANESISSSKSYHDVGKMSEFFREVNRRDGIGQTENIVTGIGSKAASSTESCHRTSNMTQRYLNGKFHPSKHLSDMLNRGNEDLSRQQKLRTLMSLPPYDLLPRPAPVRDKEHRFASPQMRFSPYNNYSTVNGYKWRVQKEKKSSYLISPINTLGTQLVSDNKKPDNQLQNAKKSINGDLSPATKVIRTVYSVSDDFSHKGNETSVCPGKVMEEHHAVMWDECKSNALGVILEPNGVQKSDMTQRTEPNSPSGDRTXXXXXXXXXXXXXXXQRAENSDSAGDREEQPSPVSVLEQFFVEESVNSPSTVSLAAEP 1870 EVKNDVEEVMSVKHLTMKKRVICELQNQQVNPKLVGH+KKKSSRFRARGCKAAIEGYSQPSERN AEKPSNNNLVSVTEASDNDVSTSNGGNHSCKNIGGKKHGHQTEINLRVEAFVNQKLTDGENLTINEVANRPNDFIEALEVLNSNKELFMKLLQDPNSLLVKHIQDLRDSQTENQPPQSSSNAKTSQCQPKGAEECEGSVDAEMVISKGSDMPQ+S ATVVLKSGKQSYPDKISNWPSPPSSHSLRKKEKSVRQTFLSFEHMKKKLRHAM+VNKKEHRQMSLDDIRKSLHEFKQ KDDIKETSRRANESISSSKSY DVGKMSEFFREVNRRDGIGQTENIVTGIGSKAASSTESCHRTSNM L R APVRDKEHRFASPQMRFSPYNNYSTVNGYKWRVQKEK SSYLISPINTLGTQLVSDNKKPDNQLQNAKKSINGDLSPATKV+RTVYSVSDDFSHKGNETSVCPGKVME HHAVMWDECKSNALGVI EPNGVQ SDMTQRTEPNSPSGDRTS WSIDVYSSSPSSIQRAENSDS GDREEQPSPVSVLEQFFVEESVNSPSTVSLAAEP Sbjct: 100 EVKNDVEEVMSVKHLTMKKRVICELQNQQVNPKLVGHSKKKSSRFRARGCKAAIEGYSQPSERNTAEKPSNNNLVSVTEASDNDVSTSNGGNHSCKNIGGKKHGHQTEINLRVEAFVNQKLTDGENLTINEVANRPNDFIEALEVLNSNKELFMKLLQDPNSLLVKHIQDLRDSQTENQPPQSSSNAKTSQCQPKGAEECEGSVDAEMVISKGSDMPQTSYATVVLKSGKQSYPDKISNWPSPPSSHSLRKKEKSVRQTFLSFEHMKKKLRHAMKVNKKEHRQMSLDDIRKSLHEFKQFKDDIKETSRRANESISSSKSYQDVGKMSEFFREVNRRDGIGQTENIVTGIGSKAASSTESCHRTSNM------------------------------------------LTQRLAPVRDKEHRFASPQMRFSPYNNYSTVNGYKWRVQKEK-SSYLISPINTLGTQLVSDNKKPDNQLQNAKKSINGDLSPATKVLRTVYSVSDDFSHKGNETSVCPGKVMEGHHAVMWDECKSNALGVISEPNGVQNSDMTQRTEPNSPSGDRTSSWSIDVYSSSPSSIQRAENSDSTGDREEQPSPVSVLEQFFVEESVNSPSTVSLAAEP 678
BLAST of g.arboreum_cottongen_reftransV1_0022117 vs. ExPASy TrEMBL
Match: A0A061GCJ7_THECC (Uncharacterized protein OS=Theobroma cacao GN=TCM_016267 PE=4 SV=1) HSP 1 Score: 703.745 bits (1815), Expect = 0.000e+0 Identity = 416/663 (62.75%), Postives = 475/663 (71.64%), Query Frame = 2 Query: 2 PEVKNDVEEVMSVKHLTMKKRVICELQNQQVNPKLVGHAK---------KKSSRFRARGCK-AAIEGYSQPSERNMAEKPSNNNLVSVTEASDNDVSTSNGGNHSCK-NIGGKKHGHQTEINLRV------EAFVNQKLTDGENLTINEVANRPNDFIEALEVLNSNKELFMKLLQDPNSLLVKHIQDLRDSQTENQPPQSSSNAKTSQCQPKGAEECEGSVDAEMVISKGSDMPQSSNATVVLKSGKQSYPDKISNWPSPPSSHSLRKKEKSVRQTFLSFEHMKKKLRHAMRVNKKEHRQMSLDDIRKSLHEFKQIKDDIKETSRRANESISSSKSYHDVGKMSEFFREVNRRDGIGQTENI---VTGIGSKAASSTESCHRTSN-MTQRYLNGKFHPSKHLSDMLNRGNEDLSRQQKLRT---LMSLPPYDLLPRPAPVRDKEHRFASPQMRFSPYNNYSTVNGYKWRVQKEKKSSYL-ISPINTLGTQLVSDNKKPDNQLQNAKKSINGDLSPATKVIRTVYSVSDDFSHKGNETSVCPGKVMEEHHAVMWDECKSNALGVILEPNGVQKSDMTQRTEP---------------NSPSGDRTXXXXXXXXXXXXXXXQRAENSDSAGDREEQPSPVSVLEQFFVEESVNSPSTVSLAAEP 1870 PEVK ++E VK K I E+QN Q NPKLVGH+K KKSSRF ARGCK A EG QPS +NM +K NNN S+TEAS +D T+NGG +SCK N+GGK + H TEINLRV EAFVNQKLTDGENL NE+ANR +FI+ALE+LNSNKELF KLLQDPNSLLVKHIQ LRDSQ +NQ QSSS AKTS CQPK A ECE SN VVLK G Q+ PD+ISNWPSP S +SLRKKE+S R FLSFEHMK+KLRHAMRVNKKE QMSLD I KS +F+Q + KE SR+ANE IS+ KSY DV KMSE EVNRRDG+GQTEN +GIG KAASSTESC+ TSN +T R+L GKFH +KHLS++LN GNEDLSR+Q LRT LMSLP YDLLP P R+KEHRFASPQMRFSPYNN+ T NGYKWRVQ EKKSS L SPI LG +SDN+KPD++LQ KKSI G+LSPATKV+ TVYS S+D SHK N+TSVCPG +ME +HA W E SNA LEPNGVQ ++ RTE +SP GD+TS S+DVYSSSP IQRAE+SDS DR EQPSP+SVLEQFFVE++ +SPST+SLAAEP Sbjct: 99 PEVKRIIKEETPVKLQVKKNTAIAEMQNLQFNPKLVGHSKDHRKASKNSKKSSRFPARGCKDRATEGCRQPSNQNMVDK-FNNNSASLTEASGDDEDTNNGGTYSCKSNVGGKHYRH-TEINLRVHMNEAVEAFVNQKLTDGENLDRNELANRSKNFIDALEILNSNKELFTKLLQDPNSLLVKHIQGLRDSQAKNQQHQSSSKAKTSHCQPKEAGECE-----------------PSNTIVVLKPGMQNCPDRISNWPSPQSHYSLRKKERSARPAFLSFEHMKRKLRHAMRVNKKEQCQMSLDGIHKSQRDFEQFDEGGKEMSRQANEKISTGKSYLDVRKMSESSPEVNRRDGMGQTENFGSGPSGIGGKAASSTESCNGTSNLLTIRHLKGKFHSTKHLSEILNSGNEDLSRKQTLRTMDRLMSLPEYDLLPLLTPGRNKEHRFASPQMRFSPYNNFPTANGYKWRVQNEKKSSCLSSSPIKNLGADPMSDNEKPDDRLQGEKKSIPGNLSPATKVLPTVYSPSEDLSHKVNQTSVCPGNIMERNHADRWGE--SNA----LEPNGVQNTNTNPRTEAVNTFGDSELLECLKLDSPLGDQTSSSSVDVYSSSPFHIQRAEDSDSMTDRAEQPSPISVLEQFFVEDNTSSPSTISLAAEP 736
BLAST of g.arboreum_cottongen_reftransV1_0022117 vs. ExPASy TrEMBL
Match: B9GKH0_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0001s09470g PE=4 SV=2) HSP 1 Score: 256.914 bits (655), Expect = 8.627e-71 Identity = 234/676 (34.62%), Postives = 359/676 (53.11%), Query Frame = 2 Query: 5 EVKNDVEEVMSVKHLTMKKRVICELQNQQVNPKLVG----------HAKKKSSRFRARGC-KAAIEGYSQPSERNMAEKPSNNNLVSVT-EASDNDVSTSNGGNHSCKNIGGKKHGHQTEINLRV------EAFVNQKLTDGENLTINEVANRPNDFIEALEVLNSNKELFMKLLQDPNSLLVKHIQDLRDSQTENQPPQSSSNAKTSQCQPKGAEECE--------GSVDAEMVISKGSDMPQSSNATVVLKSGK---QSYPDKISNWPSPPSSHSLRKKEKSVRQTFLSFEHMKKKLRHAMRVNKKEHRQMSLDD--IRKSLHEFKQIKDDIKETSRRANESISSSKSYHDVGKMSEFFREVNRRDGIGQTENIVTGIGSKAASSTESCH---RTSNM--TQRYLNGKFHPSK-HLSDMLNRGNEDLSRQQKLRT---LMSLPPYDLLPRPAPVRDKEHRFASPQMRFSPYNNYSTVNGYKWRVQKEKKSSYLISPI-NTLGTQLVSDNKKPDNQLQ--NAKKSINGDLSPATKVIRTVYSVSDDFSHKGNETSVCPGKVMEEHH-----AVMWDECKSNALGVILEPNGVQKSDMTQRTEPNSPSGDRTXXXXXXXXXXXXXXXQRAENSDSAGDREEQPSPVSVLEQFFVEESVNSPST-----VSLAAEPL 1873 E+K EE M +K K+ ++++ Q + +L G A +K R GC A G+++ N A+ S +VT E+ N V N + +C++I KHG EINL+V EAF+NQKL DG++L+ + ++ F++AL++LNSNK+LF+KLLQDPNSLLVKHI+DLRDSQ + Q +S K S+ + ECE S+D +SK + PQ S VVLK G Q+ D IS+ SPP + L+ ++SV+ +F MK+KL HAMR+++KE RQ+ L D ++KS + F++ + NE S ++ +G+ + +V D + + E I + + +AA+++E H R SN+ ++ N K+ ++ HLSD L N +LSR+Q+ +T + SLP + P P EH +PQMRFSPY +Y VN KW Q EK+++ SP TL +++KK ++QLQ +K+I+ L P K + S+ +D S G + S K+ EE+ + + S+A N + + ++ +S + ++ SP S Y SSPS+IQR E+ D A +R EQPSPVSVLE FF+E+ + PS+ L+A PL Sbjct: 74 EMKKIAEEDMPIKQQI--KKTTAKVEHVQSDTELAGDSSTSHRKAIKATRKPLRLPIYGCYDVATMGHAKSVHENSADDSSKKLESAVTKESLSNQVQPRNETDCNCRSIQHGKHGQSKEINLQVRMNEATEAFINQKLIDGKHLSTDGADDQSKHFMDALDILNSNKDLFIKLLQDPNSLLVKHIEDLRDSQEKVQQIKSYPEDKLSEQHKNNSRECERTGCTRNFNSIDR--YLSKRTGDPQPSETIVVLKPGSASLQNCADGISH-DSPPVHYRLKNVQQSVKPSFFPLVKMKRKLMHAMRMSRKE-RQLMLTDGAVQKSKYIFQE-SEKCGGGGVDINERNSPGETSCYLGRTT---MDVRSEDQMDKVEIIESSVREEAATASEKGHESSRFSNLRHSKETNNDKYVETRVHLSDFLMNENVNLSRKQRPKTRDGMSSLPEIEFFPMAGPRCKAEHARVTPQMRFSPYTSYQMVNKNKWN-QSEKRNN--TSPTRQTLEAPPWANDKKCEDQLQIIETEKTISDKLFPDVKEDENISSLENDSSPGGKKDS----KISEEYSPSGVPSRLDGSYNSDANESTRTANTTDEHESSKFCRLDSSADNQMSPSSTSDYLSSPSTIQRVEDLDKAKERAEQPSPVSVLEHFFMEDMITRPSSHASRPAELSALPL 732
BLAST of g.arboreum_cottongen_reftransV1_0022117 vs. ExPASy TrEMBL
Match: M5WGV4_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa001462mg PE=4 SV=1) HSP 1 Score: 227.639 bits (579), Expect = 7.360e-61 Identity = 222/639 (34.74%), Postives = 310/639 (48.51%), Query Frame = 2 Query: 95 NPKLVGHAKK---KSSRFRARGCKAAIEGYSQPSERNMAEKPSNN-NLVSVTEASDNDVSTSNGGNHSCKNIGGKKHGHQTEINL------RVEAFVNQKLTDGENLTINEVANRPNDFIEALEVLNSNKELFMKLLQDPNSLLVKHIQDLRDSQTENQPPQSSSNAKTSQCQPKGAEECEGSVDAEMVISKGSDM-PQSSNA-------TVVLKSGKQSYPDKISNWPSPPSSHSLRKKEKSVRQTFLSFEHMKKKLRHAMRVNKKEHRQMSLDDIRKSLHEFKQIKDDIKETSRRANESISSSKSYHDVGKMSEFFREVNRRDGIGQTENIVTGIGSKAASSTESCHR------TSNMTQRYLNGKFHPSKHLSDMLNRGNEDLSR-----QQKLRTLMSLPPYDLLPRPAPVRDKEHRFASPQMRFSPYNNYSTVNGYKWRVQKEKKSSYLISPINTLGTQLVSDNKKPDNQLQNAKKSINGDLSPATKVIRTVYSVS------------------DDFSHKGNETSV-CPGKVMEEHHAVMWDECKSNALGVILEPNGVQKSDMTQRTEPNSPSGDRTXXXXXXXXXXXXXXXQRAENSDSAGDREEQPSPVSVLEQFFVEESVNSPSTVSLAAE 1867 N K VGH K K+S+ R R +A + +S + E+P N N ++ E S +V + N CK+I KH EINL EA +NQK DG V ++ ++ALE+LNSNKELF KLLQDPNSLLVKHI+DLRDSQ +S A S+ + A + EG + K D+ P N +VLK G S +IS+ S SLR + SF +K+KLRHA+ ++KE S+D + + DD K + I S+ D G +++ ++ +R+ IG+ + + IG +AAS++ S S + KHLS++LN GN++ S Q+ ++MS P YD LP PVRD E+RF + QM FSPY+N V KWR+ KEKK+SY SP+ + + DNKK D+QLQ N P T I + +S D+ H G +S+ P E A +D K+N + P ++ +SP D+ S DV+ SSPSSIQR E+SD D+ EQPSPVSVLEQFFV+ + + ST+S AE Sbjct: 44 NSKFVGHLPKNNRKTSKTRQRSHEAKHQKHSNSV---LVEEPLNKLNSAALPEVSSKEVHSKNRRGCGCKSIDTVKHDQHNEINLVPVQLNAAEAIINQKFVDG-------VNHQSKQLLDALEILNSNKELFRKLLQDPNSLLVKHIEDLRDSQVRTHQSKSPGEANISEYRTSKARQSEGPSSIHTL--KSCDIYPSQENGESEFPERIIVLKPGPASM--EISSESINTSMQSLRNNGQRDTPADSSFSRIKRKLRHAISESRKEQHSKSIDGTLNT-SPCQSTGDDCKGKGMKI---IRSNSPIVDGGGVTKSSLDIKKRENIGKVKQCESSIGREAASTSGSGLGSSNFSLVSQPEREESETSVEAGKHLSELLNNGNKEKSYFERQAQKTWGSVMSFPEYDFLPTCNPVRDWENRFLNEQMTFSPYSNCQMVYENKWRLNKEKKASY-SSPLRQ-DVEALPDNKKLDDQLQVFDTRQNNSDYPFTD-INVLGDISSPKANNPSPAGCVQILENDNTMHHGETSSLEVPS---ESESAYKFDTIKAN---YTIRPGETNYLEIFL----DSPFEDQPLTSSPDVFQSSPSSIQRVEDSDGIEDKGEQPSPVSVLEQFFVDATCYA-STISEPAE 650
BLAST of g.arboreum_cottongen_reftransV1_0022117 vs. ExPASy TrEMBL
Match: A0A0D2N1P0_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_004G212500 PE=4 SV=1) HSP 1 Score: 202.601 bits (514), Expect = 2.686e-53 Identity = 162/460 (35.22%), Postives = 211/460 (45.87%), Query Frame = 2 Query: 119 KKKSSRFRARGCKAAIEGYSQPSERNMAEKPSNNNLVSVTEASDNDVSTSNGGNHSCKNIGGKKHGHQTEINLRV------EAFVNQKLTDGENLTINEVANRPNDFIEALEVLNSNKELFMKLLQDPNSLLVKHIQDLRDSQTENQPPQSSSNAKTSQCQPKGAEECEGSVDAEMVISKGSDMPQSSNATVVLKSGKQSYPDKISNWPSPPSSHSLRKKEKSVRQTFLSFEHMKKKLRHAMRVNKKEHRQMSLDDIRKSLHEFKQIKDDIKETSRRANESISSSKSYHDVGKMSEFFREVNRRDGIGQTENIVTGIGSKAASSTESCHRTSNMTQRYLNGKFHPSKHLSDMLNRGNEDLSRQQKLRTLMSLPPYDLLPRPAPVRDKEHRFASPQMRFSPYNNYSTVNGYKWRVQKEKKSSYLISPINTLGTQLVSDNKKPDNQLQNAKKSINGDLSPAT 1480 K S + AR AA EGY + S+RNM SN G+K H T+INLRV EAF+NQ+L ++N+ DFI+ALE+ NSNKEL MKLLQDPNSLLVKH+ +L DSQ + Q ++SS + Q N VVLK+ KQ+ P++ISNWPSP S ++ KK+ VR T LSF+H+K+KL H +R +KE QMS D RK E+SR N T++ + IG+KAASSTE C+ TS++ L SLP +D+LP P RD+EH F SPQMRFSP +STVNGYK RVQ E S +++ + + D AKKS G +SP+T Sbjct: 67 KVTKSSYPARASNAATEGYRRFSDRNMV---SNR---------------------------GRKDDHHTKINLRVRMNEAVEAFINQRL----------ISNQSTDFIDALEISNSNKELLMKLLQDPNSLLVKHVHELCDSQAKKQKTKTSS------------------------------LSQPLNTIVVLKAVKQNCPNRISNWPSPKSHYN--KKDGGVRPTLLSFQHIKRKLTHGLRAKRKEQWQMSHD--RKK-----------PESSRDVN-----------------------------ITQDFGSCIGNKAASSTEICYTTSDL----------------------------------LKSLPEHDVLPMVTPGRDREHGFDSPQMRFSP---FSTVNGYKRRVQIENMSGC----SSSVTIEAIEAQPLYDGLHGGAKKSTIGHISPST 371 The following BLAST results are available for this feature:
BLAST of g.arboreum_cottongen_reftransV1_0022117 vs. ExPASy TrEMBL
Analysis Date: 2016-11-15 (Homology Analysis for Gossypium arboreum CottonGen RefTrans V1 vs TrEMBL) Total hits: 25
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BLAST of g.arboreum_cottongen_reftransV1_0022117 vs. ExPASy Swiss-Prot
Analysis Date: 2016-11-15 (Homology Analysis for Gossypium arboreum CottonGen RefTrans V1 vs SwissProt) Total hits: 0
InterPro
Analysis Name: InterProScan analysis for Gossypium arboreum CottonGen RefTrans V1
Date Performed: 2016-11-14
Sequences
The
following sequences are available for this feature:
contig sequence >g.arboreum_cottongen_reftransV1_0022117 ID=g.arboreum_cottongen_reftransV1_0022117; Name=g.arboreum_cottongen_reftransV1_0022117; organism=Gossypium arboreum; type=contig; length=1874bpback to top Annotated Terms
The
following terms have been associated with
this contig:
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