g.arboreum_cottongen_reftransV1_0006676, g.arboreum_cottongen_reftransV1_0006676 (contig) Gossypium arboreum

Overview


Name	g.arboreum_cottongen_reftransV1_0006676
Unique Name	g.arboreum_cottongen_reftransV1_0006676
Type	contig
Organism	Gossypium arboreum (Tree cotton)
Sequence length	589

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Chr1	chromosome	g.arboreum_cottongen_reftransV1_0006676:1..589 . Chr1:49536637..49537643 -

Analyses

This contig is derived from or has results from the following analyses


Analysis Name	Date Performed
Gossypium arboreum CottonGen RefTrans V1	2016-11-14
InterProScan analysis for Gossypium arboreum CottonGen RefTrans V1	2016-11-14
Homology Analysis for Gossypium arboreum CottonGen RefTrans V1 vs TrEMBL	2016-11-15
Homology Analysis for Gossypium arboreum CottonGen RefTrans V1 vs SwissProt	2016-11-15

Homology

[Close]

BLAST of g.arboreum_cottongen_reftransV1_0006676 vs. ExPASy TrEMBL
Match: A0A067DYW2_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g012975mg PE=3 SV=1)

HSP 1 Score: 114.005 bits (284), Expect = 2.009e-26
Identity = 88/147 (59.86%), Postives = 109/147 (74.15%), Query Frame = 1

Query:  151 MAAFSPAGIQLGGEE--HKKMDPTKKMXXXXXXXXXXXXXXXXXXFCLWIYYRXXXXXXXXXXXXXXDGEKGNGLAPYLGKLKSMRTVSKEGYA-SFMDYKILEKATNKFHHGNILGEGGFGCVYKAQFNDGSYAAVKKLDCASQDA 582
            MAAFSP GIQ+G E+  H  MD   K+L+ALI+A S+L  II +L CLW+Y+ K S KSS   AKS D E G  L+ +LGK  S+R VSK+G A SF++YK+LEKAT+ FH  NILGEGGFGCVYKA+ +D  + AVKKLDCA+QDA
Sbjct:   45 MAAFSP-GIQMGSEDPHHHHMDAHHKLLIALIIACSALCLIILALLCLWLYHLKYSFKSSNKNAKSKDSENGVVLSSFLGKFTSVRMVSKKGSAISFIEYKLLEKATDSFHESNILGEGGFGCVYKAKLDDNLHVAVKKLDCATQDA 190

[Close]

BLAST of g.arboreum_cottongen_reftransV1_0006676 vs. ExPASy TrEMBL
Match: D7SUZ7_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_04s0008g06050 PE=3 SV=1)

HSP 1 Score: 113.235 bits (282), Expect = 4.425e-26
Identity = 78/146 (53.42%), Postives = 100/146 (68.49%), Query Frame = 1

Query:  151 MAAFSPAGIQLGGEEHKKMDPTKKMXXXXXXXXXXXXXXXXXXFCLWIYYRXXXXXXXXXXXXXXDGEKGNGLAPYLGKLKSMRTVSKEGYASFMDYKILEKATNKFHHGNILGEGGFGCVYKAQFNDGSYAAVKKLDCASQDAEK 588
            MAAFSPA IQ G EE++K D  KK  +AL +A ++LG  I  L  LWI+ +K S KS K+ A+SSD EK   L P L K  +M+ + ++G  S +DYK+LE ATN F   NILGEGGFGCVYKA+ +D S+ AVKK+D   QDAE+
Sbjct:   52 MAAFSPA-IQEGSEENQK-DSHKKTFIALTVASAALGVTILILLSLWIH-KKCSQKSHKSNAQSSDAEKALTLGPLLAKFNTMKVIGRKGSVSCIDYKVLETATNNFQESNILGEGGFGCVYKARLDDNSHVAVKKIDGRGQDAER 194

[Close]

BLAST of g.arboreum_cottongen_reftransV1_0006676 vs. ExPASy TrEMBL
Match: V4TSN2_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10008263mg PE=3 SV=1)

HSP 1 Score: 112.079 bits (279), Expect = 1.094e-25
Identity = 87/147 (59.18%), Postives = 108/147 (73.47%), Query Frame = 1

Query:  151 MAAFSPAGIQLGGEE--HKKMDPTKKMXXXXXXXXXXXXXXXXXXFCLWIYYRXXXXXXXXXXXXXXDGEKGNGLAPYLGKLKSMRTVSKEGYA-SFMDYKILEKATNKFHHGNILGEGGFGCVYKAQFNDGSYAAVKKLDCASQDA 582
            MAAFSP GIQ+G E+  H  MD   K+L+ALI+A S+L  II +L CLW+Y+ K S KSS   AKS D E G  L+ +LGK  S+R V K+G A SF++YK+LEKAT+ FH  NILGEGGFGCVYKA+ +D  + AVKKLDCA+QDA
Sbjct:   45 MAAFSP-GIQMGSEDPHHHHMDAHHKLLIALIIACSALCLIILALLCLWLYHLKYSFKSSNKNAKSKDSENGVVLSSFLGKFTSVRMVHKKGSAISFIEYKLLEKATDSFHESNILGEGGFGCVYKAKLDDNLHVAVKKLDCATQDA 190

[Close]

BLAST of g.arboreum_cottongen_reftransV1_0006676 vs. ExPASy TrEMBL
Match: A0A059CPM6_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_C01681 PE=3 SV=1)

HSP 1 Score: 111.694 bits (278), Expect = 1.585e-25
Identity = 73/145 (50.34%), Postives = 100/145 (68.97%), Query Frame = 1

Query:  154 AAFSPAGIQLGGEEHKKMDPTKKMXXXXXXXXXXXXXXXXXXFCLWIYYRXXXXXXXXXXXXXXDGEKGNGLAPYLGKLKSMRTVSKEGYASFMDYKILEKATNKFHHGNILGEGGFGCVYKAQFNDGSYAAVKKLDCASQDAEK 588
            AAFSP     GG  H+ +D  +K+L+ALI + S +GAII     LW+Y  K + KS+K  +  S+ E+G  LAP+LGK  S++TVS++   +F +YK+LEKA+N F   N+LGEGGFG VYKA+ +D  + AVKKLDCASQDA +
Sbjct:   59 AAFSP---DTGGRRHR-LDSHEKLLVALIASCSLVGAIILIFMGLWLYQNKFTKKSTKKSSLRSEAERGLALAPFLGKFSSLKTVSRKNSIAFFEYKLLEKASNSFSDSNVLGEGGFGRVYKARLDDDKHVAVKKLDCASQDAVR 199

[Close]

BLAST of g.arboreum_cottongen_reftransV1_0006676 vs. ExPASy TrEMBL
Match: I1M9F9_SOYBN (Uncharacterized protein OS=Glycine max PE=3 SV=1)

HSP 1 Score: 107.842 bits (268), Expect = 2.953e-24
Identity = 72/146 (49.32%), Postives = 95/146 (65.07%), Query Frame = 1

Query:  151 MAAFSPAGIQLGGEEHKKMDPTKKMXXXXXXXXXXXXXXXXXXFCLWIYYRXXXXXXXXXXXXXXDGEKGNGLAPYLGKLKSMRTVSKEGYASFMDYKILEKATNKFHHGNILGEGGFGCVYKAQFNDGSYAAVKKLDCASQDAEK 588
            M+A SP GI +G E+ + MD  KKM++A+ +A +SLGA+I  + C+WIYY K  SKS     + SD EKG   +P+L K  S++ V K+G    +DYK +EK T  F   NILGEGGFGCVYKA  +D    AVKKL C +Q AE+
Sbjct:   45 MSASSP-GIVMGAEQ-QHMDSHKKMVIAVAVASTSLGAVILCVLCIWIYYTKYPSKSKGKNVQRSDAEKGLASSPFLSKFSSIKLVGKKGCVPIIDYKQIEKTTGNFEEINILGEGGFGCVYKAHLDDNLDVAVKKLHCENQYAEQ 188

[Close]

BLAST of g.arboreum_cottongen_reftransV1_0006676 vs. ExPASy TrEMBL
Match: A0A0B2P9A0_GLYSO (Putative receptor-like protein kinase OS=Glycine soja GN=glysoja_037631 PE=4 SV=1)

HSP 1 Score: 107.842 bits (268), Expect = 2.953e-24
Identity = 72/146 (49.32%), Postives = 95/146 (65.07%), Query Frame = 1

Query:  151 MAAFSPAGIQLGGEEHKKMDPTKKMXXXXXXXXXXXXXXXXXXFCLWIYYRXXXXXXXXXXXXXXDGEKGNGLAPYLGKLKSMRTVSKEGYASFMDYKILEKATNKFHHGNILGEGGFGCVYKAQFNDGSYAAVKKLDCASQDAEK 588
            M+A SP GI +G E+ + MD  KKM++A+ +A +SLGA+I  + C+WIYY K  SKS     + SD EKG   +P+L K  S++ V K+G    +DYK +EK T  F   NILGEGGFGCVYKA  +D    AVKKL C +Q AE+
Sbjct:   45 MSASSP-GIVMGAEQ-QHMDSHKKMVIAVAVASTSLGAVILCVLCIWIYYTKYPSKSKGKNVQRSDAEKGLASSPFLSKFSSIKLVGKKGCVPIIDYKQIEKTTGNFEEINILGEGGFGCVYKAHLDDNLDVAVKKLHCENQYAEQ 188

[Close]

BLAST of g.arboreum_cottongen_reftransV1_0006676 vs. ExPASy TrEMBL
Match: C6TAW1_SOYBN (Putative uncharacterized protein OS=Glycine max PE=2 SV=1)

HSP 1 Score: 106.686 bits (265), Expect = 4.194e-24
Identity = 72/146 (49.32%), Postives = 95/146 (65.07%), Query Frame = 1

Query:  151 MAAFSPAGIQLGGEEHKKMDPTKKMXXXXXXXXXXXXXXXXXXFCLWIYYRXXXXXXXXXXXXXXDGEKGNGLAPYLGKLKSMRTVSKEGYASFMDYKILEKATNKFHHGNILGEGGFGCVYKAQFNDGSYAAVKKLDCASQDAEK 588
            M+A SP GI +G E+ + MD  KKM++A+ +  +SLGA+I  L C+WIYY K  SKS     + SD EKG   +P+L K  S++ V K+G    +DYK +EKAT  F   NILG+GGFGCVYKA  +D    AVKKL C +Q AE+
Sbjct:   46 MSASSP-GIVMGAEQ-QHMDSHKKMVIAVAVVSTSLGAVILCLLCIWIYYTKYPSKSKGKNVQRSDAEKGLASSPFLSKFSSIKLVGKKGCVPIIDYKQIEKATGNFKEINILGKGGFGCVYKAHLDDNLDVAVKKLHCENQYAEQ 189

[Close]

BLAST of g.arboreum_cottongen_reftransV1_0006676 vs. ExPASy TrEMBL
Match: A0A068VGI3_COFCA (Coffea canephora DH200=94 genomic scaffold, scaffold_288 OS=Coffea canephora GN=GSCOC_T00005568001 PE=4 SV=1)

HSP 1 Score: 107.457 bits (267), Expect = 4.381e-24
Identity = 69/145 (47.59%), Postives = 97/145 (66.90%), Query Frame = 1

Query:  151 MAAFSP-AGIQLGGEEHKKMDPTKKMXXXXXXXXXXXXXXXXXXFCLWIYYRXXXXXXXXXXXXXXDGEKGNGLAPYLGKLKSMRTVSKEGYASFMDYKILEKATNKFHHGNILGEGGFGCVYKAQFNDGSYAAVKKLDCASQDA 582
            MA  SP  G+Q G E+H +MD  +K+++ALI A ++LGAI+  +   WIY++K++SKS  +   SSDG +G     +L K  S++   ++ + + MDYK LE ATN F   +ILGEGGFGCVYKAQ  D  +AAVK+LD  +QDA
Sbjct:   57 MAHSSPGPGVQAGTEKHHQMDSNRKLVIALIAASTALGAILFLMLFFWIYHKKHTSKSQTDSLHSSDGLEGLAFGSFLAKYNSLKASCRKRFVAVMDYKALETATNNFCQSDILGEGGFGCVYKAQLEDNQFAAVKRLDGGTQDA 201

[Close]

BLAST of g.arboreum_cottongen_reftransV1_0006676 vs. ExPASy TrEMBL
Match: I1MWX5_SOYBN (Uncharacterized protein OS=Glycine max PE=3 SV=1)

HSP 1 Score: 107.071 bits (266), Expect = 5.746e-24
Identity = 72/146 (49.32%), Postives = 96/146 (65.75%), Query Frame = 1

Query:  151 MAAFSPAGIQLGGEEHKKMDPTKKMXXXXXXXXXXXXXXXXXXFCLWIYYRXXXXXXXXXXXXXXDGEKGNGLAPYLGKLKSMRTVSKEGYASFMDYKILEKATNKFHHGNILGEGGFGCVYKAQFNDGSYAAVKKLDCASQDAEK 588
            M+A SP GI +G E+ + MD  KKM++A+ +A +SLGA+I  + C+WIYY K  SKS     + SD EKG   +P+L K  S++ V K+G    +DYK +EKAT  F   NILG+GGFGCVYKA  +D    AVKKL C +Q AE+
Sbjct:   46 MSASSP-GIVMGAEQ-QHMDSHKKMVIAVAVASTSLGAVILCVLCIWIYYTKYPSKSKGKNVQRSDAEKGLASSPFLSKFSSIKLVGKKGCVPIIDYKQIEKATGNFKEINILGKGGFGCVYKAHLDDNLDVAVKKLHCENQYAEQ 189

[Close]

BLAST of g.arboreum_cottongen_reftransV1_0006676 vs. ExPASy TrEMBL
Match: A0A0B2QS56_GLYSO (Putative receptor-like protein kinase OS=Glycine soja GN=glysoja_036221 PE=4 SV=1)

HSP 1 Score: 107.071 bits (266), Expect = 5.746e-24
Identity = 72/146 (49.32%), Postives = 96/146 (65.75%), Query Frame = 1

Query:  151 MAAFSPAGIQLGGEEHKKMDPTKKMXXXXXXXXXXXXXXXXXXFCLWIYYRXXXXXXXXXXXXXXDGEKGNGLAPYLGKLKSMRTVSKEGYASFMDYKILEKATNKFHHGNILGEGGFGCVYKAQFNDGSYAAVKKLDCASQDAEK 588
            M+A SP GI +G E+ + MD  KKM++A+ +A +SLGA+I  + C+WIYY K  SKS     + SD EKG   +P+L K  S++ V K+G    +DYK +EKAT  F   NILG+GGFGCVYKA  +D    AVKKL C +Q AE+
Sbjct:   46 MSASSP-GIVMGAEQ-QHMDSHKKMVIAVAVASTSLGAVILCVLCIWIYYTKYPSKSKGKNVQRSDAEKGLASSPFLSKFSSIKLVGKKGCVPIIDYKQIEKATGNFKEINILGKGGFGCVYKAHLDDNLDVAVKKLHCENQYAEQ 189

[Close]

BLAST of g.arboreum_cottongen_reftransV1_0006676 vs. ExPASy Swiss-Prot
Match: Y1864_ARATH (Probable receptor-like protein kinase At1g80640 OS=Arabidopsis thaliana GN=At1g80640 PE=2 SV=1)

HSP 1 Score: 57.3806 bits (137), Expect = 1.039e-8
Identity = 29/73 (39.73%), Postives = 41/73 (56.16%), Query Frame = 1

Query:  346 DGEKGNGLAPYLGKLKSMRTVSKEGYASFMDYKILEKATNKFHHGNILGEGGFGCVYKAQFNDGSYAAVKKLD 564
            D  K     P + K+ S+R    +G     +Y++LE ATNKF   N+L  GG GC+Y+A  ++ S   VKKLD
Sbjct:  112 DSVKSVTTKPTVHKIDSVR----KGTIPVYEYQLLESATNKFSDSNVLSRGGRGCLYRACLDEKSSVTVKKLD 180

[Close]

BLAST of g.arboreum_cottongen_reftransV1_0006676 vs. ExPASy Swiss-Prot
Match: Y1497_ARATH (Probable receptor-like protein kinase At1g49730 OS=Arabidopsis thaliana GN=At1g49730 PE=2 SV=1)

HSP 1 Score: 57.7658 bits (138), Expect = 1.085e-8
Identity = 27/50 (54.00%), Postives = 37/50 (74.00%), Query Frame = 1

Query:  439 YKILEKATNKFHHGNILGEGGFGCVYKAQFNDGSYAAVKKLDCASQDAEK 588
            YK +  ATN F+   ++G+GGFG VYKA+FNDG  AAVKK++  S+ AE+
Sbjct:  319 YKEMTNATNDFN--TVIGQGGFGTVYKAEFNDGLIAAVKKMNKVSEQAEQ 366

[Close]

BLAST of g.arboreum_cottongen_reftransV1_0006676 vs. ExPASy Swiss-Prot
Match: PERK3_ARATH (Proline-rich receptor-like protein kinase PERK3 OS=Arabidopsis thaliana GN=PERK3 PE=2 SV=2)

HSP 1 Score: 55.8398 bits (133), Expect = 3.839e-8
Identity = 28/56 (50.00%), Postives = 34/56 (60.71%), Query Frame = 1

Query:  421 YASFMDYKILEKATNKFHHGNILGEGGFGCVYKAQFNDGSYAAVKKLDCASQDAEK 588
            + S   Y  L +ATNKF   N+LGEGGFG VYK   N+G+  AVK+L   S   EK
Sbjct:  167 HQSTFTYGELARATNKFSEANLLGEGGFGFVYKGILNNGNEVAVKQLKVGSAQGEK 222

[Close]

BLAST of g.arboreum_cottongen_reftransV1_0006676 vs. ExPASy Swiss-Prot
Match: PSKR2_ARATH (Phytosulfokine receptor 2 OS=Arabidopsis thaliana GN=PSKR2 PE=2 SV=1)

HSP 1 Score: 56.225 bits (134), Expect = 4.197e-8
Identity = 28/48 (58.33%), Postives = 32/48 (66.67%), Query Frame = 1

Query:  448 LEKATNKFHHGNILGEGGFGCVYKAQFNDGSYAAVKKL--DCASQDAE 585
            L K+TN F   NI+G GGFG VYKA F DGS AAVK+L  DC   + E
Sbjct:  747 LLKSTNNFSQANIIGCGGFGLVYKANFPDGSKAAVKRLSGDCGQMERE 794

[Close]

BLAST of g.arboreum_cottongen_reftransV1_0006676 vs. ExPASy Swiss-Prot
Match: TMK4_ARATH (Receptor-like kinase TMK4 OS=Arabidopsis thaliana GN=TMK4 PE=1 SV=1)

HSP 1 Score: 55.4546 bits (132), Expect = 6.299e-8
Identity = 23/53 (43.40%), Postives = 35/53 (66.04%), Query Frame = 1

Query:  415 EGYASFMDYKILEKATNKFHHGNILGEGGFGCVYKAQFNDGSYAAVKKLDCAS 573
            EG +  +  ++L + TN F   NILG GGFG VY  + +DG+  AVK+++CA+
Sbjct:  560 EGGSVTIPMEVLRQVTNNFSEDNILGRGGFGVVYAGELHDGTKTAVKRMECAA 612

[Close]

BLAST of g.arboreum_cottongen_reftransV1_0006676 vs. ExPASy Swiss-Prot
Match: CRK11_ARATH (Cysteine-rich receptor-like protein kinase 11 OS=Arabidopsis thaliana GN=CRK11 PE=2 SV=2)

HSP 1 Score: 55.0694 bits (131), Expect = 8.268e-8
Identity = 24/42 (57.14%), Postives = 31/42 (73.81%), Query Frame = 1

Query:  436 DYKILEKATNKFHHGNILGEGGFGCVYKAQFNDGSYAAVKKL 561
            D+K +E ATNKF   N LGEGGFG VYK + ++G+  AVK+L
Sbjct:  339 DFKTIEAATNKFSTSNKLGEGGFGAVYKGKLSNGTDVAVKRL 380

[Close]

BLAST of g.arboreum_cottongen_reftransV1_0006676 vs. ExPASy Swiss-Prot
Match: CRK15_ARATH (Cysteine-rich receptor-like protein kinase 15 OS=Arabidopsis thaliana GN=CRK15 PE=2 SV=2)

HSP 1 Score: 54.6842 bits (130), Expect = 9.854e-8
Identity = 23/47 (48.94%), Postives = 34/47 (72.34%), Query Frame = 1

Query:  433 MDYKILEKATNKFHHGNILGEGGFGCVYKAQFNDGSYAAVKKLDCAS 573
            +DY+++  ATNKF   N +G+GGFG VYK  F++G+  AVK+L  +S
Sbjct:  325 LDYRMIRAATNKFSENNKIGQGGFGEVYKGTFSNGTEVAVKRLSKSS 371

[Close]

BLAST of g.arboreum_cottongen_reftransV1_0006676 vs. ExPASy Swiss-Prot
Match: Y4345_ARATH (Probable receptor-like serine/threonine-protein kinase At4g34500 OS=Arabidopsis thaliana GN=At4g34500 PE=2 SV=1)

HSP 1 Score: 54.299 bits (129), Expect = 1.413e-7
Identity = 28/57 (49.12%), Postives = 35/57 (61.40%), Query Frame = 1

Query:  418 GYASFMDYKILEKATNKFHHGNILGEGGFGCVYKAQFNDGSYAAVKKLDCASQDAEK 588
            G+  +   K LE AT  F   N++GEGG+G VY+A F+DGS AAVK L      AEK
Sbjct:  128 GWGKWYSLKDLEIATRGFSDDNMIGEGGYGVVYRADFSDGSVAAVKNLLNNKGQAEK 184

[Close]

BLAST of g.arboreum_cottongen_reftransV1_0006676 vs. ExPASy Swiss-Prot
Match: NIK3_ARATH (Protein NSP-INTERACTING KINASE 3 OS=Arabidopsis thaliana GN=NIK3 PE=1 SV=1)

HSP 1 Score: 54.299 bits (129), Expect = 1.537e-7
Identity = 26/51 (50.98%), Postives = 32/51 (62.75%), Query Frame = 1

Query:  418 GYASFMDYKILEKATNKFHHGNILGEGGFGCVYKAQFNDGSYAAVKKL-DC 567
            G+     +K L  ATN F+  NILG GG+G VYK   NDG+  AVK+L DC
Sbjct:  284 GHLKRYTFKELRSATNHFNSKNILGRGGYGIVYKGHLNDGTLVAVKRLKDC 334

[Close]

BLAST of g.arboreum_cottongen_reftransV1_0006676 vs. ExPASy Swiss-Prot
Match: CRK22_ARATH (Cysteine-rich receptor-like protein kinase 22 OS=Arabidopsis thaliana GN=CRK22 PE=2 SV=1)

HSP 1 Score: 53.9138 bits (128), Expect = 1.720e-7
Identity = 27/52 (51.92%), Postives = 36/52 (69.23%), Query Frame = 1

Query:  436 DYKILEKATNKFHHGNILGEGGFGCVYKAQFNDGSYAAVKKLDCAS-QDAEK 588
            ++K +E ATNKF   N LGEG FG VYK +F++G+  AVK+L   S QD +K
Sbjct:  342 EFKTIEAATNKFSKSNKLGEGRFGEVYKGKFSNGTEVAVKRLSKVSGQDTKK 393

The following BLAST results are available for this feature:

BLAST of g.arboreum_cottongen_reftransV1_0006676 vs. ExPASy TrEMBL
BLAST of g.arboreum_cottongen_reftransV1_0006676 vs. ExPASy Swiss-Prot

BLAST of g.arboreum_cottongen_reftransV1_0006676 vs. ExPASy TrEMBL
Analysis Date: 2016-11-15 (Homology Analysis for Gossypium arboreum CottonGen RefTrans V1 vs TrEMBL)
Total hits: 25


Match Name	E-value	Identity	Description
A0A067DYW2_CITSI	2.009e-26	59.86	Uncharacterized protein OS=Citrus sinensis GN=CISI...	[more]
D7SUZ7_VITVI	4.425e-26	53.42	Putative uncharacterized protein OS=Vitis vinifera...	[more]
V4TSN2_9ROSI	1.094e-25	59.18	Uncharacterized protein OS=Citrus clementina GN=CI...	[more]
A0A059CPM6_EUCGR	1.585e-25	50.34	Uncharacterized protein OS=Eucalyptus grandis GN=E...	[more]
I1M9F9_SOYBN	2.953e-24	49.32	Uncharacterized protein OS=Glycine max PE=3 SV=1	[more]
A0A0B2P9A0_GLYSO	2.953e-24	49.32	Putative receptor-like protein kinase OS=Glycine s...	[more]
C6TAW1_SOYBN	4.194e-24	49.32	Putative uncharacterized protein OS=Glycine max PE...	[more]
A0A068VGI3_COFCA	4.381e-24	47.59	Coffea canephora DH200=94 genomic scaffold, scaffo...	[more]
I1MWX5_SOYBN	5.746e-24	49.32	Uncharacterized protein OS=Glycine max PE=3 SV=1	[more]
A0A0B2QS56_GLYSO	5.746e-24	49.32	Putative receptor-like protein kinase OS=Glycine s...	[more]

Pages

BLAST of g.arboreum_cottongen_reftransV1_0006676 vs. ExPASy Swiss-Prot
Analysis Date: 2016-11-15 (Homology Analysis for Gossypium arboreum CottonGen RefTrans V1 vs SwissProt)
Total hits: 22


Match Name	E-value	Identity	Description
Y1864_ARATH	1.039e-8	39.73	Probable receptor-like protein kinase At1g80640 OS...	[more]
Y1497_ARATH	1.085e-8	54.00	Probable receptor-like protein kinase At1g49730 OS...	[more]
PERK3_ARATH	3.839e-8	50.00	Proline-rich receptor-like protein kinase PERK3 OS...	[more]
PSKR2_ARATH	4.197e-8	58.33	Phytosulfokine receptor 2 OS=Arabidopsis thaliana ...	[more]
TMK4_ARATH	6.299e-8	43.40	Receptor-like kinase TMK4 OS=Arabidopsis thaliana ...	[more]
CRK11_ARATH	8.268e-8	57.14	Cysteine-rich receptor-like protein kinase 11 OS=A...	[more]
CRK15_ARATH	9.854e-8	48.94	Cysteine-rich receptor-like protein kinase 15 OS=A...	[more]
Y4345_ARATH	1.413e-7	49.12	Probable receptor-like serine/threonine-protein ki...	[more]
NIK3_ARATH	1.537e-7	50.98	Protein NSP-INTERACTING KINASE 3 OS=Arabidopsis th...	[more]
CRK22_ARATH	1.720e-7	51.92	Cysteine-rich receptor-like protein kinase 22 OS=A...	[more]

Pages

InterPro

Analysis Name: InterProScan analysis for Gossypium arboreum CottonGen RefTrans V1
Date Performed: 2016-11-14


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR013320	Concanavalin A-like lectin/glucanase domain	GENE3D	2.60.120.200		coord: 59..167 e-value: 7.2E-10 score: 38.3
None	No IPR available	GENE3D	3.30.200.20		coord: 168..191 e-value: 6.2E-6 score: 25.9
None	No IPR available	PANTHER	PTHR27001:SF62	PROTEIN KINASE FAMILY PROTEIN-RELATED	coord: 35..103 coord: 121..193
None	No IPR available	PANTHER	PTHR27001	FAMILY NOT NAMED	coord: 35..103 coord: 121..193
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 98..193
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_C_REGION	Signal peptide C-region	coord: 24..31
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 72..97
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_H_REGION	Signal peptide H-region	coord: 12..23
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE	Signal Peptide	coord: 1..31
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_N_REGION	Signal peptide N-region	coord: 1..11
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 32..71
None	No IPR available	SIGNALP_EUK	SignalP-noTM	SignalP-noTM	coord: 1..31 score: 0.712
None	No IPR available	SIGNALP_GRAM_POSITIVE	SignalP-TM	SignalP-TM	coord: 1..31 score: 0.477
None	No IPR available	TMHMM	TMhelix		coord: 75..97
None	No IPR available	TMHMM	TMhelix		coord: 12..34
IPR017441	Protein kinase, ATP binding site	PROSITE	PS00107	PROTEIN_KINASE_ATP	coord: 160..183
IPR000719	Protein kinase domain	PROSITE	PS50011	PROTEIN_KINASE_DOM	coord: 154..193 score: 8.556
IPR011009	Protein kinase-like domain	SUPERFAMILY	56112	Protein kinase-like (PK-like)	coord: 133..185

Sequences

The following sequences are available for this feature:

contig sequence

contig sequence

>g.arboreum_cottongen_reftransV1_0006676 ID=g.arboreum_cottongen_reftransV1_0006676; Name=g.arboreum_cottongen_reftransV1_0006676; organism=Gossypium arboreum; type=contig; length=589bp
AAAGAATCATTGTTTGAAAGAAACAAAGGGATGAAGAAGAAGCTTGTGCT
GCATCTGCTTCTTTTCCTTGTTTGTACTTTTGAAAACATTGTTGTTTTGG
CCGTACAAGGCCCTGCTTCATCACCCATTTCTACTCCCATCTCTACTTCA
ATGGCTGCCTTCTCTCCAGCTGGGATTCAACTTGGAGGTGAGGAGCACAA
GAAAATGGATCCAACCAAGAAAATGTTATTAGCTCTCATTCTTGCTGGCT
CTTCATTGGGTGCAATTATCTCTTCCTTGTTCTGTTTATGGATTTATTAC
AGGAAGAATTCAAGCAAATCCTCTAAAAATGGTGCTAAGAGCTCAGATGG
TGAAAAAGGGAATGGTTTGGCACCATATTTGGGTAAACTCAAGTCTATGA
GGACGGTTTCCAAAGAGGGTTATGCTTCGTTTATGGACTATAAGATACTT
GAAAAAGCTACAAACAAGTTCCATCATGGTAATATTCTGGGTGAGGGTGG
ATTTGGATGTGTTTACAAGGCTCAATTCAATGATGGTTCTTATGCTGCTG
TTAAGAAGTTGGACTGTGCAAGCCAAGATGCTGAAAAAG

Annotated Terms

The following terms have been associated with this contig:

Vocabulary: **INTERPRO**
Term	Definition
IPR013320	ConA-like_dom_sf
IPR017441	Protein_kinase_ATP_BS
IPR000719	Prot_kinase_dom
IPR011009	Kinase-like_dom_sf

Vocabulary: **Molecular Function**
Term	Definition
GO:0005524	ATP binding
GO:0004672	protein kinase activity

Vocabulary: **Biological Process**
Term	Definition
GO:0006468	protein phosphorylation

Search form

g.arboreum_cottongen_reftransV1_0006676, g.arboreum_cottongen_reftransV1_0006676 (contig) Gossypium arboreum

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