g.arboreum_cottongen_reftransV1_0001886, g.arboreum_cottongen_reftransV1_0001886 (contig) Gossypium arboreum

Overview
Nameg.arboreum_cottongen_reftransV1_0001886
Unique Nameg.arboreum_cottongen_reftransV1_0001886
Typecontig
OrganismGossypium arboreum (Tree cotton)
Sequence length895
Alignments
The following features are aligned
Feature Name Type LocationAnalysisReference
Chr3chromosomeg.arboreum_cottongen_reftransV1_0001886:1..895 .
Chr3:362906..366939 -
n/a
Homology
BLAST of g.arboreum_cottongen_reftransV1_0001886 vs. ExPASy TrEMBL
Match: A0A0B0P2P1_GOSAR (2-methoxy-6-polyprenyl-1,4-benzoquinol methylase, mitochondrial-like protein OS=Gossypium arboreum GN=F383_07788 PE=3 SV=1)

HSP 1 Score: 480.715 bits (1236), Expect = 2.805e-168
Identity = 233/233 (100.00%), Postives = 233/233 (100.00%), Query Frame = 2
Query:  197 MALRLVTKNLSGRISPKLCSASLLHSHATSFGFKEVREEEKSQMVGKVFSNVASNYDLMNDFMSGGLHRLWKDRLVSKLSPFPGMKHLDVAGGTGDVAFRILESVNSIKRRALQDPLNDDLQEETRIYVCDINPNMLDVGKNRALEKGLGEDKSLVWVQGDAEALSFEDNSMDGYTIAFGIRNVTHIEKVLSEAYRVLKRGGRFLCLELSHVDIPVFKELYDFYSFSVIPRLG 895
            MALRLVTKNLSGRISPKLCSASLLHSHATSFGFKEVREEEKSQMVGKVFSNVASNYDLMNDFMSGGLHRLWKDRLVSKLSPFPGMKHLDVAGGTGDVAFRILESVNSIKRRALQDPLNDDLQEETRIYVCDINPNMLDVGKNRALEKGLGEDKSLVWVQGDAEALSFEDNSMDGYTIAFGIRNVTHIEKVLSEAYRVLKRGGRFLCLELSHVDIPVFKELYDFYSFSVIPRLG
Sbjct:    1 MALRLVTKNLSGRISPKLCSASLLHSHATSFGFKEVREEEKSQMVGKVFSNVASNYDLMNDFMSGGLHRLWKDRLVSKLSPFPGMKHLDVAGGTGDVAFRILESVNSIKRRALQDPLNDDLQEETRIYVCDINPNMLDVGKNRALEKGLGEDKSLVWVQGDAEALSFEDNSMDGYTIAFGIRNVTHIEKVLSEAYRVLKRGGRFLCLELSHVDIPVFKELYDFYSFSVIPRLG 233          
BLAST of g.arboreum_cottongen_reftransV1_0001886 vs. ExPASy TrEMBL
Match: A0A0D2QQS0_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_004G025900 PE=3 SV=1)

HSP 1 Score: 476.863 bits (1226), Expect = 1.203e-166
Identity = 231/233 (99.14%), Postives = 231/233 (99.14%), Query Frame = 2
Query:  197 MALRLVTKNLSGRISPKLCSASLLHSHATSFGFKEVREEEKSQMVGKVFSNVASNYDLMNDFMSGGLHRLWKDRLVSKLSPFPGMKHLDVAGGTGDVAFRILESVNSIKRRALQDPLNDDLQEETRIYVCDINPNMLDVGKNRALEKGLGEDKSLVWVQGDAEALSFEDNSMDGYTIAFGIRNVTHIEKVLSEAYRVLKRGGRFLCLELSHVDIPVFKELYDFYSFSVIPRLG 895
            MALRLVTK LS RISPKLCSASLLHSHATSFGFKEVREEEKSQMVGKVFSNVASNYDLMNDFMSGGLHRLWKDRLVSKLSPFPGMKHLDVAGGTGDVAFRILESVNSIKRRALQDPLNDDLQEETRIYVCDINPNMLDVGKNRALEKGLGEDKSLVWVQGDAEALSFEDNSMDGYTIAFGIRNVTHIEKVLSEAYRVLKRGGRFLCLELSHVDIPVFKELYDFYSFSVIPRLG
Sbjct:    1 MALRLVTKTLSSRISPKLCSASLLHSHATSFGFKEVREEEKSQMVGKVFSNVASNYDLMNDFMSGGLHRLWKDRLVSKLSPFPGMKHLDVAGGTGDVAFRILESVNSIKRRALQDPLNDDLQEETRIYVCDINPNMLDVGKNRALEKGLGEDKSLVWVQGDAEALSFEDNSMDGYTIAFGIRNVTHIEKVLSEAYRVLKRGGRFLCLELSHVDIPVFKELYDFYSFSVIPRLG 233          
BLAST of g.arboreum_cottongen_reftransV1_0001886 vs. ExPASy TrEMBL
Match: A0A0D2RSD8_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_004G025900 PE=4 SV=1)

HSP 1 Score: 475.322 bits (1222), Expect = 1.728e-166
Identity = 231/233 (99.14%), Postives = 231/233 (99.14%), Query Frame = 2
Query:  197 MALRLVTKNLSGRISPKLCSASLLHSHATSFGFKEVREEEKSQMVGKVFSNVASNYDLMNDFMSGGLHRLWKDRLVSKLSPFPGMKHLDVAGGTGDVAFRILESVNSIKRRALQDPLNDDLQEETRIYVCDINPNMLDVGKNRALEKGLGEDKSLVWVQGDAEALSFEDNSMDGYTIAFGIRNVTHIEKVLSEAYRVLKRGGRFLCLELSHVDIPVFKELYDFYSFSVIPRLG 895
            MALRLVTK LS RISPKLCSASLLHSHATSFGFKEVREEEKSQMVGKVFSNVASNYDLMNDFMSGGLHRLWKDRLVSKLSPFPGMKHLDVAGGTGDVAFRILESVNSIKRRALQDPLNDDLQEETRIYVCDINPNMLDVGKNRALEKGLGEDKSLVWVQGDAEALSFEDNSMDGYTIAFGIRNVTHIEKVLSEAYRVLKRGGRFLCLELSHVDIPVFKELYDFYSFSVIPRLG
Sbjct:    1 MALRLVTKTLSSRISPKLCSASLLHSHATSFGFKEVREEEKSQMVGKVFSNVASNYDLMNDFMSGGLHRLWKDRLVSKLSPFPGMKHLDVAGGTGDVAFRILESVNSIKRRALQDPLNDDLQEETRIYVCDINPNMLDVGKNRALEKGLGEDKSLVWVQGDAEALSFEDNSMDGYTIAFGIRNVTHIEKVLSEAYRVLKRGGRFLCLELSHVDIPVFKELYDFYSFSVIPRLG 233          
BLAST of g.arboreum_cottongen_reftransV1_0001886 vs. ExPASy TrEMBL
Match: A0A0D2P5U6_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_004G025900 PE=3 SV=1)

HSP 1 Score: 460.685 bits (1184), Expect = 6.812e-160
Identity = 231/263 (87.83%), Postives = 231/263 (87.83%), Query Frame = 2
Query:  197 MALRLVTKNLSGRISPKLCSASLLHSHATSFGFKEVREEEKSQMVGKVFSNVASNYDLMNDFMSGGLHRLWKDRL------------------------------VSKLSPFPGMKHLDVAGGTGDVAFRILESVNSIKRRALQDPLNDDLQEETRIYVCDINPNMLDVGKNRALEKGLGEDKSLVWVQGDAEALSFEDNSMDGYTIAFGIRNVTHIEKVLSEAYRVLKRGGRFLCLELSHVDIPVFKELYDFYSFSVIPRLG 895
            MALRLVTK LS RISPKLCSASLLHSHATSFGFKEVREEEKSQMVGKVFSNVASNYDLMNDFMSGGLHRLWKDRL                              VSKLSPFPGMKHLDVAGGTGDVAFRILESVNSIKRRALQDPLNDDLQEETRIYVCDINPNMLDVGKNRALEKGLGEDKSLVWVQGDAEALSFEDNSMDGYTIAFGIRNVTHIEKVLSEAYRVLKRGGRFLCLELSHVDIPVFKELYDFYSFSVIPRLG
Sbjct:    1 MALRLVTKTLSSRISPKLCSASLLHSHATSFGFKEVREEEKSQMVGKVFSNVASNYDLMNDFMSGGLHRLWKDRLDFVCIFVLIISLLSSCCFLYFTSSAQFIRLVSKLSPFPGMKHLDVAGGTGDVAFRILESVNSIKRRALQDPLNDDLQEETRIYVCDINPNMLDVGKNRALEKGLGEDKSLVWVQGDAEALSFEDNSMDGYTIAFGIRNVTHIEKVLSEAYRVLKRGGRFLCLELSHVDIPVFKELYDFYSFSVIPRLG 263          
BLAST of g.arboreum_cottongen_reftransV1_0001886 vs. ExPASy TrEMBL
Match: A0A0D2QQS5_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_004G025900 PE=3 SV=1)

HSP 1 Score: 419.083 bits (1076), Expect = 5.080e-144
Identity = 202/202 (100.00%), Postives = 202/202 (100.00%), Query Frame = 2
Query:  290 GFKEVREEEKSQMVGKVFSNVASNYDLMNDFMSGGLHRLWKDRLVSKLSPFPGMKHLDVAGGTGDVAFRILESVNSIKRRALQDPLNDDLQEETRIYVCDINPNMLDVGKNRALEKGLGEDKSLVWVQGDAEALSFEDNSMDGYTIAFGIRNVTHIEKVLSEAYRVLKRGGRFLCLELSHVDIPVFKELYDFYSFSVIPRLG 895
            GFKEVREEEKSQMVGKVFSNVASNYDLMNDFMSGGLHRLWKDRLVSKLSPFPGMKHLDVAGGTGDVAFRILESVNSIKRRALQDPLNDDLQEETRIYVCDINPNMLDVGKNRALEKGLGEDKSLVWVQGDAEALSFEDNSMDGYTIAFGIRNVTHIEKVLSEAYRVLKRGGRFLCLELSHVDIPVFKELYDFYSFSVIPRLG
Sbjct:   24 GFKEVREEEKSQMVGKVFSNVASNYDLMNDFMSGGLHRLWKDRLVSKLSPFPGMKHLDVAGGTGDVAFRILESVNSIKRRALQDPLNDDLQEETRIYVCDINPNMLDVGKNRALEKGLGEDKSLVWVQGDAEALSFEDNSMDGYTIAFGIRNVTHIEKVLSEAYRVLKRGGRFLCLELSHVDIPVFKELYDFYSFSVIPRLG 225          
BLAST of g.arboreum_cottongen_reftransV1_0001886 vs. ExPASy TrEMBL
Match: A0A067KW81_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_03762 PE=3 SV=1)

HSP 1 Score: 416.001 bits (1068), Expect = 9.222e-143
Identity = 196/233 (84.12%), Postives = 214/233 (91.85%), Query Frame = 2
Query:  197 MALRLVTKNLSGRISPKLCSASLLHSHATSFGFKEVREEEKSQMVGKVFSNVASNYDLMNDFMSGGLHRLWKDRLVSKLSPFPGMKHLDVAGGTGDVAFRILESVNSIKRRALQDPLNDDLQEETRIYVCDINPNMLDVGKNRALEKGLGEDKSLVWVQGDAEALSFEDNSMDGYTIAFGIRNVTHIEKVLSEAYRVLKRGGRFLCLELSHVDIPVFKELYDFYSFSVIPRLG 895
            MALRL T+    R  P   S+S LHSHATSFGFKEVREEEKSQMV  VFSNVASNYDLMND MSGGLHRLWKDRLV KL+PFPGMKHLDVAGGTGDVAFRILE+VNSIK RALQDPLND+LQEET+IYVCDINPNML+VGK RA+E+GLGEDKSLVWV+GDAEALSFED SMDGYTIAFGIRNVTHIEKVL+EAYRVLKRGGRFLCLELSHV++P+FK+LYD+YSFS+IP +G
Sbjct:    1 MALRLATRKFGSRFFPMFSSSSQLHSHATSFGFKEVREEEKSQMVSNVFSNVASNYDLMNDLMSGGLHRLWKDRLVCKLNPFPGMKHLDVAGGTGDVAFRILETVNSIKYRALQDPLNDNLQEETQIYVCDINPNMLNVGKKRAIERGLGEDKSLVWVEGDAEALSFEDCSMDGYTIAFGIRNVTHIEKVLAEAYRVLKRGGRFLCLELSHVEVPIFKDLYDYYSFSIIPAVG 233          
BLAST of g.arboreum_cottongen_reftransV1_0001886 vs. ExPASy TrEMBL
Match: A0A067KH13_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_10391 PE=3 SV=1)

HSP 1 Score: 414.075 bits (1063), Expect = 5.892e-142
Identity = 195/233 (83.69%), Postives = 213/233 (91.42%), Query Frame = 2
Query:  197 MALRLVTKNLSGRISPKLCSASLLHSHATSFGFKEVREEEKSQMVGKVFSNVASNYDLMNDFMSGGLHRLWKDRLVSKLSPFPGMKHLDVAGGTGDVAFRILESVNSIKRRALQDPLNDDLQEETRIYVCDINPNMLDVGKNRALEKGLGEDKSLVWVQGDAEALSFEDNSMDGYTIAFGIRNVTHIEKVLSEAYRVLKRGGRFLCLELSHVDIPVFKELYDFYSFSVIPRLG 895
            MALRL ++    R  P   S S LHSHATSFGFKEVREEEKSQMV  VFSNVASNYDLMND MSGGLHRLWKDRLV KL+PFPGMKHLDVAGGTGDVAFRILE+VNSIK RALQDPLND+LQEET+IYVCDINPNML+VGK RA+E+GLGEDKSLVWV+GDAEALSFED SMDGYTIAFGIRNVTHIEKVL+EAYRVLKRGGRFLCLELSHV++P+FK+LYD+YSFS+IP +G
Sbjct:    1 MALRLASRKFGSRFFPIFSSTSQLHSHATSFGFKEVREEEKSQMVSNVFSNVASNYDLMNDLMSGGLHRLWKDRLVCKLNPFPGMKHLDVAGGTGDVAFRILETVNSIKYRALQDPLNDNLQEETQIYVCDINPNMLNVGKKRAIERGLGEDKSLVWVEGDAEALSFEDCSMDGYTIAFGIRNVTHIEKVLAEAYRVLKRGGRFLCLELSHVEVPIFKDLYDYYSFSIIPAVG 233          
BLAST of g.arboreum_cottongen_reftransV1_0001886 vs. ExPASy TrEMBL
Match: M5WGX0_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa009519mg PE=3 SV=1)

HSP 1 Score: 409.453 bits (1051), Expect = 3.298e-140
Identity = 192/233 (82.40%), Postives = 213/233 (91.42%), Query Frame = 2
Query:  197 MALRLVTKNLSGRISPKLCSASLLHSHATSFGFKEVREEEKSQMVGKVFSNVASNYDLMNDFMSGGLHRLWKDRLVSKLSPFPGMKHLDVAGGTGDVAFRILESVNSIKRRALQDPLNDDLQEETRIYVCDINPNMLDVGKNRALEKGLGEDKSLVWVQGDAEALSFEDNSMDGYTIAFGIRNVTHIEKVLSEAYRVLKRGGRFLCLELSHVDIPVFKELYDFYSFSVIPRLG 895
            MALR VT+ L  ++ P+   ASLLHSHATSFGFKEVRE+EKS+MVG VFSNVASNYDLMND MS GLHRLWKDRLVSKL+PFPGMKHLDVAGGTGDVAFRIL+S+NSI+RRA QD L DDLQEET++YV DINPNML+VGK RALE+GLGEDKSL+WV+GDAEALSF DN+MDGYTIAFGIRNVTHIEKVLSEAYRVLK GGRFLCLELSHVD+PVFK+ YD+YSFS+IP LG
Sbjct:    1 MALRTVTRKLGSKLLPRFSPASLLHSHATSFGFKEVREDEKSRMVGDVFSNVASNYDLMNDVMSAGLHRLWKDRLVSKLNPFPGMKHLDVAGGTGDVAFRILDSINSIRRRATQDVLEDDLQEETKVYVSDINPNMLNVGKKRALERGLGEDKSLLWVEGDAEALSFGDNTMDGYTIAFGIRNVTHIEKVLSEAYRVLKHGGRFLCLELSHVDVPVFKQFYDYYSFSIIPALG 233          
BLAST of g.arboreum_cottongen_reftransV1_0001886 vs. ExPASy TrEMBL
Match: B9ILV4_POPTR (UbiE/COQ5 methyltransferase family protein OS=Populus trichocarpa GN=POPTR_0018s09570g PE=3 SV=1)

HSP 1 Score: 405.986 bits (1042), Expect = 1.002e-138
Identity = 190/233 (81.55%), Postives = 214/233 (91.85%), Query Frame = 2
Query:  197 MALRLVTKNLSGRISPKLCSASLLHSHATSFGFKEVREEEKSQMVGKVFSNVASNYDLMNDFMSGGLHRLWKDRLVSKLSPFPGMKHLDVAGGTGDVAFRILESVNSIKRRALQDPLNDDLQEETRIYVCDINPNMLDVGKNRALEKGLGEDKSLVWVQGDAEALSFEDNSMDGYTIAFGIRNVTHIEKVLSEAYRVLKRGGRFLCLELSHVDIPVFKELYDFYSFSVIPRLG 895
            MAL+LV++ L  +  P L S S LHSHATSFGFK VREEEKSQMVG VFS+VASNYDLMND MSGGLHRLWKDRLVS L+PFPGMKHLDVAGGTGDVAF+IL+ ++SIKRRA QDP+ND LQEET+I+VCDINPNML+VGK RA+E+GLGEDKSL+WV+GDAEALSFEDN+MDGYTIAFGIRNVTHIEKVL+EAYRVLK GGRFLCLELSHV++PVFKELYD+YSFSVIP +G
Sbjct:    1 MALKLVSRKLGSKFLPMLSSTSPLHSHATSFGFKHVREEEKSQMVGNVFSSVASNYDLMNDLMSGGLHRLWKDRLVSMLNPFPGMKHLDVAGGTGDVAFKILDGISSIKRRANQDPINDHLQEETQIHVCDINPNMLNVGKKRAIERGLGEDKSLIWVEGDAEALSFEDNTMDGYTIAFGIRNVTHIEKVLAEAYRVLKHGGRFLCLELSHVEVPVFKELYDYYSFSVIPAVG 233          
BLAST of g.arboreum_cottongen_reftransV1_0001886 vs. ExPASy TrEMBL
Match: V4WIH8_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10009101mg PE=3 SV=1)

HSP 1 Score: 405.601 bits (1041), Expect = 1.165e-138
Identity = 194/233 (83.26%), Postives = 213/233 (91.42%), Query Frame = 2
Query:  197 MALRLVTKNLSGRISPKLCSASLLHSHATSFGFKEVREEEKSQMVGKVFSNVASNYDLMNDFMSGGLHRLWKDRLVSKLSPFPGMKHLDVAGGTGDVAFRILESVNSIKRRALQDPLNDDLQEETRIYVCDINPNMLDVGKNRALEKGLGEDKSLVWVQGDAEALSFEDNSMDGYTIAFGIRNVTHIEKVLSEAYRVLKRGGRFLCLELSHVDIPVFKELYDFYSFSVIPRLG 895
            MA+R+VT+NL  R+ P L S SLLHSHATSFGFKEV  EEKSQ+V  VFS+VA NYDLMND MSGGLHRLWKDRLVSKL+PFPGMKHLDVAGGTGDVAFRIL++VNSIKRRALQD L DDLQEETRIYVCDINPNML+VGK RALE+G  +DKSL+WV+GDAEAL FED++MDGYTIAFGIRNVTHIEK L+EAYRVLKRGGRFLCLELSHVDIPVFKELYD+YSFSVIP +G
Sbjct:    1 MAVRVVTRNLGSRLLPMLSSTSLLHSHATSFGFKEVPAEEKSQLVSNVFSSVAKNYDLMNDLMSGGLHRLWKDRLVSKLNPFPGMKHLDVAGGTGDVAFRILDTVNSIKRRALQDVLEDDLQEETRIYVCDINPNMLNVGKKRALERGY-QDKSLLWVEGDAEALCFEDSTMDGYTIAFGIRNVTHIEKALAEAYRVLKRGGRFLCLELSHVDIPVFKELYDYYSFSVIPAIG 232          
BLAST of g.arboreum_cottongen_reftransV1_0001886 vs. ExPASy Swiss-Prot
Match: COQ5_ARATH (2-methoxy-6-polyprenyl-1,4-benzoquinol methylase, mitochondrial OS=Arabidopsis thaliana GN=COQ5 PE=2 SV=1)

HSP 1 Score: 366.696 bits (940), Expect = 3.154e-125
Identity = 176/233 (75.54%), Postives = 203/233 (87.12%), Query Frame = 2
Query:  197 MALRLVTKNLSGRISPKLCSASLLHSHATSFGFKEVREEEKSQMVGKVFSNVASNYDLMNDFMSGGLHRLWKDRLVSKLSPFPGMKHLDVAGGTGDVAFRILESVNSIKRRALQDPLNDDLQEETRIYVCDINPNMLDVGKNRALEKGLGEDKSLVWVQGDAEALSFEDNSMDGYTIAFGIRNVTHIEKVLSEAYRVLKRGGRFLCLELSHVDIPVFKELYDFYSFSVIPRLG 895
            MALR V++ L  RI  +    + LHSHATSFGF+EV+EEEKS++VG VF+NVAS+YD+MND MSGGLHRLWK+RLV KLSPF GMKHLDVAGGTGDVAFRI ++V S+KRRALQ  +++   EET+IYVCDINPNML+VGK RA E+GL ++KSLVWV+GDAEALSF+DNSMDGYTIAFGIRNVTHIEK L+EAYRVLKRGGRFLCLELSHV+IPVFK LYD YSF VIP LG
Sbjct:    1 MALRSVSRRLGSRILNQRSFVASLHSHATSFGFQEVKEEEKSKLVGNVFTNVASSYDIMNDVMSGGLHRLWKERLVGKLSPFAGMKHLDVAGGTGDVAFRIYDAVYSVKRRALQ-KVDEASLEETQIYVCDINPNMLNVGKQRAAERGLRDNKSLVWVEGDAEALSFDDNSMDGYTIAFGIRNVTHIEKALAEAYRVLKRGGRFLCLELSHVEIPVFKNLYDLYSFQVIPNLG 232          
BLAST of g.arboreum_cottongen_reftransV1_0001886 vs. ExPASy Swiss-Prot
Match: COQ5_ORYSJ (2-methoxy-6-polyprenyl-1,4-benzoquinol methylase, mitochondrial OS=Oryza sativa subsp. japonica GN=COQ5 PE=2 SV=1)

HSP 1 Score: 353.214 bits (905), Expect = 7.379e-120
Identity = 170/236 (72.03%), Postives = 196/236 (83.05%), Query Frame = 2
Query:  191 RGMALRLVTKNLSGRISPKLC-SASLLHSHATSFGFKEVREEEKSQMVGKVFSNVASNYDLMNDFMSGGLHRLWKDRLVSKLSPFPGMKHLDVAGGTGDVAFRILESVNSIKRRALQDPLNDDLQEETRIYVCDINPNMLDVGKNRALEKGLGEDKSLVWVQGDAEALSFEDNSMDGYTIAFGIRNVTHIEKVLSEAYRVLKRGGRFLCLELSHVDIPVFKELYDFYSFSVIPRLG 895
            R  A RL + +    +SP      + LHSHATSFG+K+V EE+KS++VG VFS+VAS+YDLMND MS GLHRLWKDRL+SKL+PFPGMKHLDVAGGTGDVAFR LE +NS+  RA+Q  L D ++EET+IYVCDINPNML+VGK RA E+G  E   L W+QGDAEALSFED SMDGYTIAFGIRNVTHIEK LSEAYRVLKRGGRFLCLELSHVD+P+FKE+YD YSFSVIP +G
Sbjct:    4 RSAAGRLASSSRRRLLSPPTSIHTAFLHSHATSFGYKQVAEEDKSKLVGNVFSSVASSYDLMNDLMSVGLHRLWKDRLISKLNPFPGMKHLDVAGGTGDVAFRALERINSVSHRAMQGTLTD-IEEETQIYVCDINPNMLNVGKKRASERGYKEGHCLSWIQGDAEALSFEDGSMDGYTIAFGIRNVTHIEKALSEAYRVLKRGGRFLCLELSHVDVPLFKEIYDVYSFSVIPAVG 238          
BLAST of g.arboreum_cottongen_reftransV1_0001886 vs. ExPASy Swiss-Prot
Match: COQ5_XENLA (2-methoxy-6-polyprenyl-1,4-benzoquinol methylase, mitochondrial OS=Xenopus laevis GN=coq5 PE=2 SV=1)

HSP 1 Score: 224.172 bits (570), Expect = 2.646e-69
Identity = 117/223 (52.47%), Postives = 146/223 (65.47%), Query Frame = 2
Query:  281 TSFGFKEVREEEKSQMVGKVFSNVASNYDLMNDFMSGGLHRLWKDRLVSKLSPFPGMKHLDVAGGTGDVAFRILESVNSIKRRALQDPL--NDDL-----------QEE-----TRIYVCDINPNMLDVGKNRALEKGLGEDKSLVWVQGDAEALSFEDNSMDGYTIAFGIRNVTHIEKVLSEAYRVLKRGGRFLCLELSHVDIPVFKELYDFYSFSVIPRLG 895
            T FGF+ V EEEK + V KVF NVA NYD+MND MS G+HR WKD L+  + P PGM+ LD+AGGTGD++FR +  + + + + ++  L    DL           +EE     +R  +CDIN  ML VG  ++L   LG  + L WV GDAE L F D+  D YTIAFGIRNVTHIE+ L EAYRVLK GGRFLCLE SHV+ P+  ++YD YSF VIP LG
Sbjct:   34 THFGFQAVSEEEKRERVYKVFENVAHNYDIMNDAMSLGVHRFWKDWLLQLMKPTPGMQLLDMAGGTGDISFRFINYIRAQREKWIRQELKFQQDLSWPDISKTYQNKEEGSLMGSRAVICDINKEMLKVGLQKSLR--LGYSEGLSWVAGDAEELPFGDDKFDVYTIAFGIRNVTHIEQALQEAYRVLKPGGRFLCLEFSHVNNPLLSKIYDVYSFQVIPVLG 254          
BLAST of g.arboreum_cottongen_reftransV1_0001886 vs. ExPASy Swiss-Prot
Match: COQ5_HUMAN (2-methoxy-6-polyprenyl-1,4-benzoquinol methylase, mitochondrial OS=Homo sapiens GN=COQ5 PE=1 SV=2)

HSP 1 Score: 224.557 bits (571), Expect = 3.247e-69
Identity = 123/237 (51.90%), Postives = 151/237 (63.71%), Query Frame = 2
Query:  248 LCSASLL----HSHATSFGFKEVREEEKSQMVGKVFSNVASNYDLMNDFMSGGLHRLWKDRLVSKLSPFPGMKHLDVAGGTGDVAFRILESVNSIKRR-------ALQDPLNDDLQEE----------TRIYVCDINPNMLDVGKNRALEKGLGEDKSLVWVQGDAEALSFEDNSMDGYTIAFGIRNVTHIEKVLSEAYRVLKRGGRFLCLELSHVDIPVFKELYDFYSFSVIPRLG 895
            L SA LL     +  T FGF+ V EEEK   V +VF +VA  YD+MND MS G+HR+WKD L+ K+ P PG + LDVAGGTGD+AFR L  V S  +R       A Q+   +++ +E          +R+ VCDIN  ML VGK +AL +G      L WV GDAE L F+D+  D YTIAFGIRNVTHI++ L EA+RVLK GGRFLCLE S V+ P+   LYD YSF VIP LG
Sbjct:   37 LLSARLLSQEKRAAETHFGFETVSEEEKGGKVYQVFESVAKKYDVMNDMMSLGIHRVWKDLLLWKMHPLPGTQLLDVAGGTGDIAFRFLNYVQSQHQRKQKRQLRAQQNLSWEEIAKEYQNEEDSLGGSRVVVCDINKEMLKVGKQKALAQGY--RAGLAWVLGDAEELPFDDDKFDIYTIAFGIRNVTHIDQALQEAHRVLKPGGRFLCLEFSQVNNPLISRLYDLYSFQVIPVLG 271          
BLAST of g.arboreum_cottongen_reftransV1_0001886 vs. ExPASy Swiss-Prot
Match: COQ5_BOVIN (2-methoxy-6-polyprenyl-1,4-benzoquinol methylase, mitochondrial OS=Bos taurus GN=COQ5 PE=2 SV=1)

HSP 1 Score: 224.557 bits (571), Expect = 3.687e-69
Identity = 125/258 (48.45%), Postives = 157/258 (60.85%), Query Frame = 2
Query:  173 KAGNRCRGMALRLVTKNLSGRISPKLCSASLLHSHATSFGFKEVREEEKSQMVGKVFSNVASNYDLMNDFMSGGLHRLWKDRLVSKLSPFPGMKHLDVAGGTGDVAFRILESVNSI----KRRALQDPLNDDLQEETRIY-------------VCDINPNMLDVGKNRALEKGLGEDKSLVWVQGDAEALSFEDNSMDGYTIAFGIRNVTHIEKVLSEAYRVLKRGGRFLCLELSHVDIPVFKELYDFYSFSVIPRLG 895
            +A + CR   LR  + +  G +  +L S     +  T FGF+ V EEEK   V +VF +VA  YD+MND MS G+HR+WKD L+ K+ PFPG + LDVAGGTGD+AFR L  V +     ++R L+   N   +E  R Y             VCDIN  ML +GK +A  +  G    L W+ GDAE L F+DN  D YTIAFGIRNVTHI++ L EA+RVLK GGRFLCLE S V+ P+   LYD YSF VIP LG
Sbjct:   19 RAVSGCRLPGLR--SSSPRGPLGARLLSQEK-EATETHFGFETVSEEEKGGKVYQVFESVAKKYDVMNDMMSLGIHRVWKDLLLWKMRPFPGTQLLDVAGGTGDIAFRFLNYVQAQHQRKQKRQLRAQQNLSWEEIARKYQNEEDSLGGSHVMVCDINKEMLKIGKQKA--RAQGYKAGLAWILGDAEELPFDDNKFDVYTIAFGIRNVTHIDQALQEAHRVLKPGGRFLCLEFSQVNNPLLSRLYDVYSFQVIPVLG 271          
BLAST of g.arboreum_cottongen_reftransV1_0001886 vs. ExPASy Swiss-Prot
Match: COQ5_DANRE (2-methoxy-6-polyprenyl-1,4-benzoquinol methylase, mitochondrial OS=Danio rerio GN=coq5 PE=2 SV=1)

HSP 1 Score: 222.631 bits (566), Expect = 1.709e-68
Identity = 121/250 (48.40%), Postives = 155/250 (62.00%), Query Frame = 2
Query:  203 LRLVTKNLSGR--ISPKLCSASLLHSHATSFGFKEVREEEKSQMVGKVFSNVASNYDLMNDFMSGGLHRLWKDRLVSKLSPFPGMKHLDVAGGTGDVAFRILESVNS-------IKRRALQDPLNDDLQ----------EETRIYVCDINPNMLDVGKNRALEKGLGEDKSLVWVQGDAEALSFEDNSMDGYTIAFGIRNVTHIEKVLSEAYRVLKRGGRFLCLELSHVDIPVFKELYDFYSFSVIPRLG 895
            LR  +K L  R  I+ +   +      +T FGF+ V EEEK++ V KVF +VA  YD+MND MS G+HRLWKD L+  ++P PG++ LD AGGTGD++FR LE   S       ++ ++ Q P   D+            ++R  VCDIN  ML VGK RA + G+     L WV GDAE L F+D+  D YTIAFGIRNVTHIE+ L EA+RVLK GGRF+CLE S V  P+   LYD YSF +IP LG
Sbjct:   24 LRCRSKYLCRRAAITARRGYSDSTEGRSTHFGFQTVPEEEKAEKVYKVFESVAKKYDVMNDAMSLGIHRLWKDTLLHIMNPQPGLRLLDTAGGTGDISFRFLEYTRSMYDRQQRLRAKSQQTPSWKDIAGHYVSDEEGPPQSRAVVCDINKEMLKVGKQRAEDAGI--TTGLSWVAGDAEELPFDDDQFDMYTIAFGIRNVTHIEQALQEAFRVLKPGGRFMCLEFSKVTNPLLARLYDAYSFQMIPVLG 271          
BLAST of g.arboreum_cottongen_reftransV1_0001886 vs. ExPASy Swiss-Prot
Match: COQ5_CHICK (2-methoxy-6-polyprenyl-1,4-benzoquinol methylase, mitochondrial OS=Gallus gallus GN=COQ5 PE=2 SV=1)

HSP 1 Score: 221.861 bits (564), Expect = 1.918e-68
Identity = 117/223 (52.47%), Postives = 143/223 (64.13%), Query Frame = 2
Query:  281 TSFGFKEVREEEKSQMVGKVFSNVASNYDLMNDFMSGGLHRLWKDRLVSKLSPFPGMKHLDVAGGTGDVAFRILESVNSIKRRALQDPL-----------NDDLQEE-------TRIYVCDINPNMLDVGKNRALEKGLGEDKSLVWVQGDAEALSFEDNSMDGYTIAFGIRNVTHIEKVLSEAYRVLKRGGRFLCLELSHVDIPVFKELYDFYSFSVIPRLG 895
            T FGF+ V E E+ + + +VF NVA  YD+MND MS G+HR+WKD LV K++P PG   +DVAGGTGD+AFR L  V S++ R LQ  L           +   QEE       +++ VCDIN  ML  GK +A  + LG  + L WV G+AE L F+D+  D YTIAFGIRNVT I+  L EAYRVLK GGRFLCLE SHV  P+   LYD YSF VIP LG
Sbjct:   35 THFGFQNVSEAERREKIYQVFENVAEKYDVMNDSMSLGIHRVWKDILVHKMNPSPGTLLVDVAGGTGDIAFRFLNYVRSVRERQLQQKLRHHQNLSWQEISKSYQEEKSNPLGDSQVVVCDINKEMLKAGKQKA--QHLGYSEGLSWVLGNAEELHFDDDKFDVYTIAFGIRNVTRIDLALQEAYRVLKPGGRFLCLEFSHVSNPLLSRLYDLYSFQVIPVLG 255          
BLAST of g.arboreum_cottongen_reftransV1_0001886 vs. ExPASy Swiss-Prot
Match: COQ5_RAT (2-methoxy-6-polyprenyl-1,4-benzoquinol methylase, mitochondrial OS=Rattus norvegicus GN=Coq5 PE=2 SV=1)

HSP 1 Score: 222.246 bits (565), Expect = 2.408e-68
Identity = 118/222 (53.15%), Postives = 141/222 (63.51%), Query Frame = 2
Query:  281 TSFGFKEVREEEKSQMVGKVFSNVASNYDLMNDFMSGGLHRLWKDRLVSKLSPFPGMKHLDVAGGTGDVAFRILESVNSI----KRRALQDPLNDDLQEETRIY-------------VCDINPNMLDVGKNRALEKGLGEDKSLVWVQGDAEALSFEDNSMDGYTIAFGIRNVTHIEKVLSEAYRVLKRGGRFLCLELSHVDIPVFKELYDFYSFSVIPRLG 895
            T FGF+ V E+EK   V +VF +VA  YDLMND MS G+HR WKD L+ K+ P PG + LDVAGGTGD+AFR L  V +     +RR L+   N   +E  R Y             VCDIN  ML VGK +AL +G      L WV GDAE L F+D+  D YTIAFGIRNVTHI++ L EA+RVLK GGRFLCLE S V+ P+   LYD YSF VIP +G
Sbjct:   52 THFGFETVSEKEKGGKVYQVFQSVARKYDLMNDMMSLGIHRAWKDLLIRKMHPLPGTQLLDVAGGTGDIAFRFLSYVQTQHERKQRRQLRTRQNLSWEEIARKYQSKEDPLGGSLVMVCDINREMLKVGKQKALARG--HTAGLAWVLGDAEELPFDDDRFDVYTIAFGIRNVTHIDRALQEAHRVLKPGGRFLCLEFSQVNDPLISRLYDLYSFQVIPVIG 271          
BLAST of g.arboreum_cottongen_reftransV1_0001886 vs. ExPASy Swiss-Prot
Match: COQ5_PONAB (2-methoxy-6-polyprenyl-1,4-benzoquinol methylase, mitochondrial OS=Pongo abelii GN=COQ5 PE=2 SV=1)

HSP 1 Score: 221.09 bits (562), Expect = 6.049e-68
Identity = 121/241 (50.21%), Postives = 152/241 (63.07%), Query Frame = 2
Query:  224 LSGRISPKLCSASLLHSHATSFGFKEVREEEKSQMVGKVFSNVASNYDLMNDFMSGGLHRLWKDRLVSKLSPFPGMKHLDVAGGTGDVAFRILESVNSIKRR-------ALQDPLNDDLQEE----------TRIYVCDINPNMLDVGKNRALEKGLGEDKSLVWVQGDAEALSFEDNSMDGYTIAFGIRNVTHIEKVLSEAYRVLKRGGRFLCLELSHVDIPVFKELYDFYSFSVIPRLG 895
            LS R+ P+   A+  H     FG + V EEEK   V +VF +VA  YD+MND MS G+HR+WKD L+ K+ P PG + LDVAGGTGD+AFR L  V S  +R       A Q+   +++ +E          +R+ +CDIN  ML VGK +AL +G      L WV GDAE L F+D+  D YTIAFGIRNVTHI++ L EA+RVLK GGRFLCLE S V+ P+   LYD YSF VIP LG
Sbjct:   38 LSARLLPQEKRATETH-----FGSETVSEEEKGGKVYQVFESVAKKYDVMNDMMSLGIHRVWKDLLLWKMRPLPGTQLLDVAGGTGDIAFRFLNYVQSQHQRKQKRQLRAQQNLSWEEIAKEYQNEEDSLGGSRVVMCDINKEMLKVGKQKALAQGY--RAGLAWVLGDAEELPFDDDKFDIYTIAFGIRNVTHIDQALQEAHRVLKPGGRFLCLEFSQVNNPLISRLYDLYSFQVIPVLG 271          
BLAST of g.arboreum_cottongen_reftransV1_0001886 vs. ExPASy Swiss-Prot
Match: UBIE_BRUME (Ubiquinone/menaquinone biosynthesis C-methyltransferase UbiE OS=Brucella melitensis biotype 1 (strain 16M / ATCC 23456 / NCTC 10094) GN=ubiE PE=3 SV=1)

HSP 1 Score: 216.083 bits (549), Expect = 9.373e-67
Identity = 111/206 (53.88%), Postives = 140/206 (67.96%), Query Frame = 2
Query:  284 SFGFKEVREEEKSQMVGKVFSNVASNYDLMNDFMSGGLHRLWKDRLVSKLSPF--PGMKHLDVAGGTGDVAFRILESVNSIKRRALQDPLNDDLQEETRIYVCDINPNMLDVGKNRALEKGLGEDKSLVWVQGDAEALSFEDNSMDGYTIAFGIRNVTHIEKVLSEAYRVLKRGGRFLCLELSHVDIPVFKELYDFYSFSVIPRLG 895
            SFGFK V E EK  +V  VF  VA  YD+MND MS G+HR+WKD +V+ L+P   PG   LDVAGGTGD+AFRI+E+                   +  + + DIN +ML VG+ RA++KGL ++  L +V+ +AE L FEDNS D YTIAFGIRNV HI+K LSEAYRVLK GGRFLCLE S V++PV  ++YD +SF  IPR+G
Sbjct:   26 SFGFKAVDENEKQGLVNDVFHKVAKRYDIMNDLMSAGMHRVWKDAMVAWLAPSKRPGWTSLDVAGGTGDIAFRIVEASG----------------RQAHVTILDINGSMLGVGRERAIKKGLIDN--LEFVEANAEELPFEDNSFDAYTIAFGIRNVPHIDKALSEAYRVLKPGGRFLCLEFSEVELPVLDKVYDEWSFRAIPRIG 213          
The following BLAST results are available for this feature:
BLAST of g.arboreum_cottongen_reftransV1_0001886 vs. ExPASy TrEMBL
Analysis Date: 2016-11-15 (Homology Analysis for Gossypium arboreum CottonGen RefTrans V1 vs TrEMBL)
Total hits: 25
Match NameE-valueIdentityDescription
A0A0B0P2P1_GOSAR2.805e-168100.002-methoxy-6-polyprenyl-1,4-benzoquinol methylase, ... [more]
A0A0D2QQS0_GOSRA1.203e-16699.14Uncharacterized protein OS=Gossypium raimondii GN=... [more]
A0A0D2RSD8_GOSRA1.728e-16699.14Uncharacterized protein OS=Gossypium raimondii GN=... [more]
A0A0D2P5U6_GOSRA6.812e-16087.83Uncharacterized protein OS=Gossypium raimondii GN=... [more]
A0A0D2QQS5_GOSRA5.080e-144100.00Uncharacterized protein OS=Gossypium raimondii GN=... [more]
A0A067KW81_JATCU9.222e-14384.12Uncharacterized protein OS=Jatropha curcas GN=JCGZ... [more]
A0A067KH13_JATCU5.892e-14283.69Uncharacterized protein OS=Jatropha curcas GN=JCGZ... [more]
M5WGX0_PRUPE3.298e-14082.40Uncharacterized protein OS=Prunus persica GN=PRUPE... [more]
B9ILV4_POPTR1.002e-13881.55UbiE/COQ5 methyltransferase family protein OS=Popu... [more]
V4WIH8_9ROSI1.165e-13883.26Uncharacterized protein OS=Citrus clementina GN=CI... [more]

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BLAST of g.arboreum_cottongen_reftransV1_0001886 vs. ExPASy Swiss-Prot
Analysis Date: 2016-11-15 (Homology Analysis for Gossypium arboreum CottonGen RefTrans V1 vs SwissProt)
Total hits: 25
Match NameE-valueIdentityDescription
COQ5_ARATH3.154e-12575.542-methoxy-6-polyprenyl-1,4-benzoquinol methylase, ... [more]
COQ5_ORYSJ7.379e-12072.032-methoxy-6-polyprenyl-1,4-benzoquinol methylase, ... [more]
COQ5_XENLA2.646e-6952.472-methoxy-6-polyprenyl-1,4-benzoquinol methylase, ... [more]
COQ5_HUMAN3.247e-6951.902-methoxy-6-polyprenyl-1,4-benzoquinol methylase, ... [more]
COQ5_BOVIN3.687e-6948.452-methoxy-6-polyprenyl-1,4-benzoquinol methylase, ... [more]
COQ5_DANRE1.709e-6848.402-methoxy-6-polyprenyl-1,4-benzoquinol methylase, ... [more]
COQ5_CHICK1.918e-6852.472-methoxy-6-polyprenyl-1,4-benzoquinol methylase, ... [more]
COQ5_RAT2.408e-6853.152-methoxy-6-polyprenyl-1,4-benzoquinol methylase, ... [more]
COQ5_PONAB6.049e-6850.212-methoxy-6-polyprenyl-1,4-benzoquinol methylase, ... [more]
UBIE_BRUME9.373e-6753.88Ubiquinone/menaquinone biosynthesis C-methyltransf... [more]

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InterPro
Analysis Name: InterProScan analysis for Gossypium arboreum CottonGen RefTrans V1
Date Performed: 2016-11-14
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR004033UbiE/COQ5 methyltransferasePFAMPF01209Ubie_methyltrancoord: 40..233
e-value: 1.4E-58
score: 197.8
IPR004033UbiE/COQ5 methyltransferaseTIGRFAMTIGR01934TIGR01934coord: 45..233
e-value: 5.8E-57
score: 190.5
IPR004033UbiE/COQ5 methyltransferasePROSITEPS51608SAM_MT_UBIEcoord: 40..233
score: 70.491
IPR029063S-adenosyl-L-methionine-dependent methyltransferaseGENE3D3.40.50.150coord: 43..230
e-value: 5.1E-43
score: 146.5
IPR029063S-adenosyl-L-methionine-dependent methyltransferaseSUPERFAMILY53335S-adenosyl-L-methionine-dependent methyltransferasescoord: 27..229
NoneNo IPR availablePANTHERPTHR10108:SF242-METHOXY-6-POLYPRENYL-1,4-BENZOQUINOL METHYLASE, MITOCHONDRIALcoord: 28..109
NoneNo IPR availablePANTHERPTHR10108:SF242-METHOXY-6-POLYPRENYL-1,4-BENZOQUINOL METHYLASE, MITOCHONDRIALcoord: 127..233
NoneNo IPR availablePANTHERPTHR10108METHYLTRANSFERASEcoord: 28..109
coord: 127..233
NoneNo IPR availableSIGNALP_GRAM_POSITIVESignalP-TMSignalP-TMcoord: 1..21
score: 0.452
IPR023576UbiE/COQ5 methyltransferase, conserved sitePROSITEPS01183UBIE_1coord: 56..71
IPR023576UbiE/COQ5 methyltransferase, conserved sitePROSITEPS01184UBIE_2coord: 196..210

Sequences
The following sequences are available for this feature:

contig sequence

>g.arboreum_cottongen_reftransV1_0001886 ID=g.arboreum_cottongen_reftransV1_0001886; Name=g.arboreum_cottongen_reftransV1_0001886; organism=Gossypium arboreum; type=contig; length=895bp
CGCCTCTGTTTAGTCTTTAGTACCCTAAAACCCCAAAATTATCAGTGATT
TTCGTTATTCCATTGATCCTTTCGCCAATATCCAACGCCATCTCTGTCTT
CACCATTTTCAGTCACGATCGAAATCTGCTGGGCCCTGGAGGTTTCGTTT
CTCCATACAAATCGACACAGTGAAAGCAGGCAATCGTTGTAGGGGAATGG
CTCTCAGGCTGGTAACTAAGAATCTCAGCGGTCGAATCTCGCCCAAGCTG
TGTTCTGCTTCTCTGTTACATTCACATGCCACAAGTTTTGGGTTTAAAGA
AGTACGAGAAGAAGAGAAAAGCCAAATGGTTGGTAAAGTCTTTAGCAATG
TTGCTTCAAACTATGATCTCATGAATGACTTCATGAGTGGCGGACTACAT
AGACTGTGGAAGGATAGATTGGTTTCCAAACTGAGCCCATTTCCAGGAAT
GAAACATCTTGATGTAGCTGGTGGAACAGGTGATGTTGCTTTCAGGATTC
TGGAAAGTGTTAACAGCATCAAACGCAGAGCATTACAAGATCCACTCAAT
GATGACCTACAGGAAGAAACTCGGATATATGTCTGCGACATCAACCCAAA
CATGTTAGATGTTGGAAAAAATCGTGCCCTAGAGAAAGGTCTTGGAGAAG
ACAAATCTCTTGTATGGGTGCAAGGAGATGCAGAAGCCCTAAGTTTTGAA
GATAATTCAATGGATGGTTATACCATTGCATTTGGAATTAGAAATGTCAC
CCACATAGAGAAAGTTCTTTCTGAAGCTTATAGGGTTTTGAAACGGGGAG
GAAGATTCCTTTGTCTCGAACTGAGCCATGTTGACATTCCTGTATTTAAG
GAACTGTATGACTTTTATTCTTTCTCGGTTATCCCACGACTGGGA
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Annotated Terms
The following terms have been associated with this contig:
Vocabulary: INTERPRO
TermDefinition
IPR004033UbiE/COQ5_MeTrFase
IPR029063SAM-dependent_MTases_sf
IPR023576UbiE/COQ5_MeTrFase_CS
Vocabulary: Molecular Function
TermDefinition
GO:0008168methyltransferase activity