g.arboreum_cottongen_reftransV1_0008458, g.arboreum_cottongen_reftransV1_0008458 (contig) Gossypium arboreum

Overview


Name	g.arboreum_cottongen_reftransV1_0008458
Unique Name	g.arboreum_cottongen_reftransV1_0008458
Type	contig
Organism	Gossypium arboreum (Tree cotton)
Sequence length	1442

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Chr4	chromosome	g.arboreum_cottongen_reftransV1_0008458:1..1442 . Chr4:57986364..57988731 +

Analyses

This contig is derived from or has results from the following analyses


Analysis Name	Date Performed
Gossypium arboreum CottonGen RefTrans V1	2016-11-14
InterProScan analysis for Gossypium arboreum CottonGen RefTrans V1	2016-11-14
Homology Analysis for Gossypium arboreum CottonGen RefTrans V1 vs TrEMBL	2016-11-15
Homology Analysis for Gossypium arboreum CottonGen RefTrans V1 vs SwissProt	2016-11-15

Homology

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BLAST of g.arboreum_cottongen_reftransV1_0008458 vs. ExPASy TrEMBL
Match: A0A0B0PN99_GOSAR (Lysine-specific demethylase 3B OS=Gossypium arboreum GN=F383_11237 PE=4 SV=1)

HSP 1 Score: 856.67 bits (2212), Expect = 0.000e+0
Identity = 407/407 (100.00%), Postives = 407/407 (100.00%), Query Frame = -3

Query:  220 KEDLSHFQMKWAKGEPVIVRNALSNSTGLSWEPMVMWRALCETEDLHTSLEMSEVRAIDCLACCEVGINTYQFFKGYMEGRSYHNFWPEMLKLKDWPPSNNFEDLLPRHCDEFIRILPFQEYTDPRSGILNLAVKLPAGVLKPDLGPKTYIAYGISQELGRGDSVTKLHYDLSDAVNILTHTADVALGEEQLTAIEKLKMKHKAQDAKESLERDREDKHPINEGRKGITDQNRYSDNNIDELRARNSGHSKNTGGALWDIFRREDVPKLEAYLRKHSKEFRHIYCSPVEKVIHPIHDQSFYLTMEHKRKLKEEFGVEPWTFEQNLGEAVFIPAGCPHQVRNLKSCTKVAVDFVSPQSIKECLRLTEEFRQLPKNHRAREDKLEINKMIIYGVERAIRELSDLLSTPN 1440
            KEDLSHFQMKWAKGEPVIVRNALSNSTGLSWEPMVMWRALCETEDLHTSLEMSEVRAIDCLACCEVGINTYQFFKGYMEGRSYHNFWPEMLKLKDWPPSNNFEDLLPRHCDEFIRILPFQEYTDPRSGILNLAVKLPAGVLKPDLGPKTYIAYGISQELGRGDSVTKLHYDLSDAVNILTHTADVALGEEQLTAIEKLKMKHKAQDAKESLERDREDKHPINEGRKGITDQNRYSDNNIDELRARNSGHSKNTGGALWDIFRREDVPKLEAYLRKHSKEFRHIYCSPVEKVIHPIHDQSFYLTMEHKRKLKEEFGVEPWTFEQNLGEAVFIPAGCPHQVRNLKSCTKVAVDFVSPQSIKECLRLTEEFRQLPKNHRAREDKLEINKMIIYGVERAIRELSDLLSTPN
Sbjct:  486 KEDLSHFQMKWAKGEPVIVRNALSNSTGLSWEPMVMWRALCETEDLHTSLEMSEVRAIDCLACCEVGINTYQFFKGYMEGRSYHNFWPEMLKLKDWPPSNNFEDLLPRHCDEFIRILPFQEYTDPRSGILNLAVKLPAGVLKPDLGPKTYIAYGISQELGRGDSVTKLHYDLSDAVNILTHTADVALGEEQLTAIEKLKMKHKAQDAKESLERDREDKHPINEGRKGITDQNRYSDNNIDELRARNSGHSKNTGGALWDIFRREDVPKLEAYLRKHSKEFRHIYCSPVEKVIHPIHDQSFYLTMEHKRKLKEEFGVEPWTFEQNLGEAVFIPAGCPHQVRNLKSCTKVAVDFVSPQSIKECLRLTEEFRQLPKNHRAREDKLEINKMIIYGVERAIRELSDLLSTPN 892

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BLAST of g.arboreum_cottongen_reftransV1_0008458 vs. ExPASy TrEMBL
Match: A0A0D2RS62_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_006G082600 PE=4 SV=1)

HSP 1 Score: 835.869 bits (2158), Expect = 0.000e+0
Identity = 396/407 (97.30%), Postives = 402/407 (98.77%), Query Frame = -3

Query:  220 KEDLSHFQMKWAKGEPVIVRNALSNSTGLSWEPMVMWRALCETEDLHTSLEMSEVRAIDCLACCEVGINTYQFFKGYMEGRSYHNFWPEMLKLKDWPPSNNFEDLLPRHCDEFIRILPFQEYTDPRSGILNLAVKLPAGVLKPDLGPKTYIAYGISQELGRGDSVTKLHYDLSDAVNILTHTADVALGEEQLTAIEKLKMKHKAQDAKESLERDREDKHPINEGRKGITDQNRYSDNNIDELRARNSGHSKNTGGALWDIFRREDVPKLEAYLRKHSKEFRHIYCSPVEKVIHPIHDQSFYLTMEHKRKLKEEFGVEPWTFEQNLGEAVFIPAGCPHQVRNLKSCTKVAVDFVSPQSIKECLRLTEEFRQLPKNHRAREDKLEINKMIIYGVERAIRELSDLLSTPN 1440
            KEDLSHFQMKWAKGEPVIVRNAL+NSTGLSWEPMVMWRALCETEDLHTSLEMSEVRAIDCLACCEVGINTYQFFKGYMEGRSYHNFWPEMLKLKDWPPSNNFEDLLPRH DEFIRILPFQEYTDPRSGILNLAVKLP GVLKPDLGPKTYIAYGISQELGRGDSVTKLHYDLSDAVNILTHTADVALGEEQL AIEKLKMKHKAQDAKE LERDREDKHPINEGRKGITDQN+YSDNNID++ ARNSGHSKNTGGALWDIFRREDVPKLEAYLRKHSKEFRHIYCSPVE+VIHPIHDQSFYLTMEHKRKLKEEFGVEPWTFEQNLGEAVFIPAGCPHQVRNLKSCTKVAVDFVSPQSIKECLRLTEEFRQLPKNHRAREDKLEINKMIIYGVERAIRELSDL+STPN
Sbjct:  486 KEDLSHFQMKWAKGEPVIVRNALANSTGLSWEPMVMWRALCETEDLHTSLEMSEVRAIDCLACCEVGINTYQFFKGYMEGRSYHNFWPEMLKLKDWPPSNNFEDLLPRHYDEFIRILPFQEYTDPRSGILNLAVKLPPGVLKPDLGPKTYIAYGISQELGRGDSVTKLHYDLSDAVNILTHTADVALGEEQLAAIEKLKMKHKAQDAKEKLERDREDKHPINEGRKGITDQNQYSDNNIDDVGARNSGHSKNTGGALWDIFRREDVPKLEAYLRKHSKEFRHIYCSPVERVIHPIHDQSFYLTMEHKRKLKEEFGVEPWTFEQNLGEAVFIPAGCPHQVRNLKSCTKVAVDFVSPQSIKECLRLTEEFRQLPKNHRAREDKLEINKMIIYGVERAIRELSDLISTPN 892

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BLAST of g.arboreum_cottongen_reftransV1_0008458 vs. ExPASy TrEMBL
Match: A0A061GNU1_THECC (Transcription factor jumonji domain-containing protein, putative isoform 1 OS=Theobroma cacao GN=TCM_030286 PE=4 SV=1)

HSP 1 Score: 704.901 bits (1818), Expect = 0.000e+0
Identity = 349/430 (81.16%), Postives = 370/430 (86.05%), Query Frame = -3

Query:  214 EDLSHFQMKWAKGEPVIVRNALSNSTGLSWEPMVMWRALCETEDLHTSLEMSEVRAIDCLACCEVGINTYQFFKGYMEGRSYHNFWPEMLKLKDWPPSNNFEDLLPRHCDEFIRILPFQEYTDPRSGILNLAVKLPAGVLKPDLGPKTYIAYGISQELGRGDSVTKLHYDLSDAVNILTHTADVALGEEQLTAIEKLKMKHKAQDAKESLERDREDKHPINEGRKG-------------ITDQ-NRYSDNNI-----DELRARNSG---HSKNTGGALWDIFRREDVPKLEAYLRKHSKEFRHIYCSPVEKVIHPIHDQSFYLTMEHKRKLKEEFGVEPWTFEQNLGEAVFIPAGCPHQVRNLKSCTKVAVDFVSPQSIKECLRLTEEFRQLPKNHRAREDKLEINKMIIYGVERAIRELSDLLSTPN*A 1437
            EDLSHFQM WA+GEPVIV+NAL+NSTGLSWEPMV WRALCE  D  +SL+MSEV+AIDCLA CEV INT QFFKGYMEGR Y NFWPEMLKLKDWPPSN FEDLLPRHCDEFI  LPFQEY+DPRSGILNLAVKLP GVLKPDLGPKTYIAYGI++ELGRGDSVTKLH D+SDAVNILTH ADVAL +EQL AIE+LKMKHKAQD KE LER+R DKHPI EG                I DQ + YSDNNI     DEL AR  G     K TGGALWDIFRREDVPKLEAYLRKHSKEFRH YCSPVE+VIHPIHDQSFYLTMEHKRKLKEEFGVEPWTFEQ+LGEAVFIPAGCPHQVRNLKSCTKVAVDFVSP++IKECLRLTEEFRQLPKNHRAREDKLEI KMIIYGVERAI+EL +L+STPN A
Sbjct:  488 EDLSHFQMHWARGEPVIVQNALANSTGLSWEPMVTWRALCEKVDSDSSLDMSEVKAIDCLAGCEVEINTRQFFKGYMEGRRYDNFWPEMLKLKDWPPSNEFEDLLPRHCDEFISALPFQEYSDPRSGILNLAVKLPPGVLKPDLGPKTYIAYGIAEELGRGDSVTKLHCDMSDAVNILTHIADVALSKEQLAAIEELKMKHKAQDEKEHLERERLDKHPIKEGLDAESSDLENKMDAPEIRDQKDHYSDNNILDASPDELGARIPGLYTSRKETGGALWDIFRREDVPKLEAYLRKHSKEFRHTYCSPVEQVIHPIHDQSFYLTMEHKRKLKEEFGVEPWTFEQHLGEAVFIPAGCPHQVRNLKSCTKVAVDFVSPENIKECLRLTEEFRQLPKNHRAREDKLEIKKMIIYGVERAIKELEELVSTPNSA 917

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BLAST of g.arboreum_cottongen_reftransV1_0008458 vs. ExPASy TrEMBL
Match: A0A0D2Q5J8_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_006G082600 PE=4 SV=1)

HSP 1 Score: 646.736 bits (1667), Expect = 0.000e+0
Identity = 305/315 (96.83%), Postives = 310/315 (98.41%), Query Frame = -3

Query:  496 KEDLSHFQMKWAKGEPVIVRNALSNSTGLSWEPMVMWRALCETEDLHTSLEMSEVRAIDCLACCEVGINTYQFFKGYMEGRSYHNFWPEMLKLKDWPPSNNFEDLLPRHCDEFIRILPFQEYTDPRSGILNLAVKLPAGVLKPDLGPKTYIAYGISQELGRGDSVTKLHYDLSDAVNILTHTADVALGEEQLTAIEKLKMKHKAQDAKESLERDREDKHPINEGRKGITDQNRYSDNNIDELRARNSGHSKNTGGALWDIFRREDVPKLEAYLRKHSKEFRHIYCSPVEKVIHPIHDQSFYLTMEHKRKLKEEFG 1440
            KEDLSHFQMKWAKGEPVIVRNAL+NSTGLSWEPMVMWRALCETEDLHTSLEMSEVRAIDCLACCEVGINTYQFFKGYMEGRSYHNFWPEMLKLKDWPPSNNFEDLLPRH DEFIRILPFQEYTDPRSGILNLAVKLP GVLKPDLGPKTYIAYGISQELGRGDSVTKLHYDLSDAVNILTHTADVALGEEQL AIEKLKMKHKAQDAKE LERDREDKHPINEGRKGITDQN+YSDNNID++ ARNSGHSKNTGGALWDIFRREDVPKLEAYLRKHSKEFRHIYCSPVE+VIHPIHDQSFYLTMEHKRKLKEEFG
Sbjct:  486 KEDLSHFQMKWAKGEPVIVRNALANSTGLSWEPMVMWRALCETEDLHTSLEMSEVRAIDCLACCEVGINTYQFFKGYMEGRSYHNFWPEMLKLKDWPPSNNFEDLLPRHYDEFIRILPFQEYTDPRSGILNLAVKLPPGVLKPDLGPKTYIAYGISQELGRGDSVTKLHYDLSDAVNILTHTADVALGEEQLAAIEKLKMKHKAQDAKEKLERDREDKHPINEGRKGITDQNQYSDNNIDDVGARNSGHSKNTGGALWDIFRREDVPKLEAYLRKHSKEFRHIYCSPVERVIHPIHDQSFYLTMEHKRKLKEEFG 800

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BLAST of g.arboreum_cottongen_reftransV1_0008458 vs. ExPASy TrEMBL
Match: V4TR56_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10014405mg PE=4 SV=1)

HSP 1 Score: 607.06 bits (1564), Expect = 0.000e+0
Identity = 297/428 (69.39%), Postives = 343/428 (80.14%), Query Frame = -3

Query:  220 EDLSHFQMKWAKGEPVIVRNALSNSTGLSWEPMVMWRALCETEDLHTSLEMSEVRAIDCLACCEVGINTYQFFKGYMEGRSYHNFWPEMLKLKDWPPSNNFEDLLPRHCDEFIRILPFQEYTDPRSGILNLAVKLPAGVLKPDLGPKTYIAYGISQELGRGDSVTKLHYDLSDAVNILTHTADVALGEEQLTAIEKLKMKHKAQDAKESLERDRED---KHPINEGRKGITDQNRYSDNNI-------------DELR--ARNSGHSKNT----GGALWDIFRREDVPKLEAYLRKHSKEFRHIYCSPVEKVIHPIHDQSFYLTMEHKRKLKEEFGVEPWTFEQNLGEAVFIPAGCPHQVRNLKSCTKVAVDFVSPQSIKECLRLTEEFRQLPKNHRAREDKLEINKMIIYGVERAIRELSDLLSTPN 1437
            E+L  FQ  W KGEPVIVRN L   TGLSWEPMVMWRALCE  D   S  MSEV+AIDCLA CEV I+T QFFKGY +GR+Y NFWPEMLKLKDWPPS+ FEDL+PRHCDEFI  LPFQEY+DPR+GILNLAVKLP+GVLKPDLGPKTYIAYG+++ELGRGDSVTKLH D+SDAVNILTHT +V L EEQ +A+E+LK +H+AQD KE+L RD  D   + P ++  K  TD +  +D+ +             DE++  A    HS+ T    GGALWDIFRR+DVPKLEAYLRKH KEFRH+YCSPVE+VIHPIHDQ FYL+ EHK+KLKEEFGVEPWTFEQ LGEAVFIPAGCPHQVRNLKSCTKVAVDFVSP+++ ECLRLT+EFR LPKNHRAREDKLEI KMI+Y V +AI++ + L+   N
Sbjct:  296 EELFRFQKHWIKGEPVIVRNVLDKVTGLSWEPMVMWRALCENVDSEVSSMMSEVKAIDCLASCEVEISTRQFFKGYTQGRTYDNFWPEMLKLKDWPPSDKFEDLMPRHCDEFISALPFQEYSDPRAGILNLAVKLPSGVLKPDLGPKTYIAYGVAEELGRGDSVTKLHCDMSDAVNILTHTEEVLLTEEQHSAVERLKKEHRAQDLKENLVRDGMDESIEEPNSDNNKEDTDVSEINDSELLPSGIRGEFKMSRDEMQGTAFTCPHSEGTMVESGGALWDIFRRQDVPKLEAYLRKHFKEFRHVYCSPVEQVIHPIHDQCFYLSSEHKKKLKEEFGVEPWTFEQKLGEAVFIPAGCPHQVRNLKSCTKVAVDFVSPENVDECLRLTKEFRLLPKNHRAREDKLEIQKMILYAVAQAIKDANSLIPALN 723

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BLAST of g.arboreum_cottongen_reftransV1_0008458 vs. ExPASy TrEMBL
Match: A0A067GSB7_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g002333mg PE=4 SV=1)

HSP 1 Score: 606.675 bits (1563), Expect = 0.000e+0
Identity = 296/428 (69.16%), Postives = 344/428 (80.37%), Query Frame = -3

Query:  220 EDLSHFQMKWAKGEPVIVRNALSNSTGLSWEPMVMWRALCETEDLHTSLEMSEVRAIDCLACCEVGINTYQFFKGYMEGRSYHNFWPEMLKLKDWPPSNNFEDLLPRHCDEFIRILPFQEYTDPRSGILNLAVKLPAGVLKPDLGPKTYIAYGISQELGRGDSVTKLHYDLSDAVNILTHTADVALGEEQLTAIEKLKMKHKAQDAKESLERDRED---KHPINEGRKGITDQNRYSDNNI-------------DELR--ARNSGHSKNT----GGALWDIFRREDVPKLEAYLRKHSKEFRHIYCSPVEKVIHPIHDQSFYLTMEHKRKLKEEFGVEPWTFEQNLGEAVFIPAGCPHQVRNLKSCTKVAVDFVSPQSIKECLRLTEEFRQLPKNHRAREDKLEINKMIIYGVERAIRELSDLLSTPN 1437
            E+L  FQ  W KGEPVIVRN L   TGLSWEPMVMWRALCE  D   S +MSEV+AIDCLA CEV I+T QFFKGY +GR+Y NFWPEMLKLKDWPPS+ FEDL+PRHCDEFI  LPFQEY+DPR+GILNLAVKLP+GVLKPDLGPKTYIAYG+++ELGRGDSVTKLH D+SDAVNILTHT +V L EEQ +A+E+LK +H+AQD KE+L +D  D   + P ++  K  TD +  +D+ +             DE++  A    HS+ T    GGALWDIFRR+DVPKLEAYLRKH KEFRH+YCSPVE+VIHPIHDQ FYL+ EHK+KLKEEFGVEPWTFEQ LGEAVFIPAGCPHQVRNLKSCTKVAVDFVSP+++ ECLRLT+EFR LPKNHRAREDKLEI KMI+Y V +AI++ + L+   N
Sbjct:  296 EELFRFQKHWIKGEPVIVRNVLDKVTGLSWEPMVMWRALCENVDSEVSSKMSEVKAIDCLASCEVEISTRQFFKGYTQGRTYDNFWPEMLKLKDWPPSDKFEDLMPRHCDEFISALPFQEYSDPRAGILNLAVKLPSGVLKPDLGPKTYIAYGVAEELGRGDSVTKLHCDMSDAVNILTHTEEVLLTEEQHSAVERLKKEHRAQDLKENLVQDGMDESIEEPNSDNNKEDTDVSEINDSELLPSGIRGEFKMSRDEMQGTAFTCPHSEGTMVESGGALWDIFRRQDVPKLEAYLRKHFKEFRHVYCSPVEQVIHPIHDQCFYLSSEHKKKLKEEFGVEPWTFEQKLGEAVFIPAGCPHQVRNLKSCTKVAVDFVSPENVDECLRLTKEFRLLPKNHRAREDKLEIKKMILYAVAQAIKDANSLIPALN 723

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BLAST of g.arboreum_cottongen_reftransV1_0008458 vs. ExPASy TrEMBL
Match: A0A0D2T0K3_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_011G012300 PE=4 SV=1)

HSP 1 Score: 603.979 bits (1556), Expect = 0.000e+0
Identity = 293/393 (74.55%), Postives = 327/393 (83.21%), Query Frame = -3

Query:  289 EDLSHFQMKWAKGEPVIVRNALSNSTGLSWEPMVMWRALCETEDLHTSLEMSEVRAIDCLACCEVGINTYQFFKGYMEGRSYHNFWPEMLKLKDWPPSNNFEDLLPRHCDEFIRILPFQEYTDPRSGILNLAVKLPAGVLKPDLGPKTYIAYGISQELGRGDSVTKLHYDLSDAVNILTHTADVALGEEQLTAIEKLKMKHKAQDAKESLERDREDKHPINEGRKGI--TDQNRYSDNNIDELRARNSGHS--------KNTGGALWDIFRREDVPKLEAYLRKHSKEFRHIYCSPVEKVIHPIHDQSFYLTMEHKRKLKEEFGVEPWTFEQNLGEAVFIPAGCPHQVRNLKSCTKVAVDFVSPQSIKECLRLTEEFRQLPKNHRAREDKLEI 1437
            E   HFQ +WAKGEPVIV+N L+NS+GLSWEPMVMWRALC+       LEM EV+AIDCLA CEV INT QFFKGY EGR+Y+N WPEMLKLKDWPPS+ FEDLLPRHCDEFI +LPFQEY DPRSGILNLAVKLP  VLKPDLGPKTYIAYG+++ELGRGDSVTKLH DLSDAVNILTHT++VAL +EQL A+EKLKMKHKAQD KESLER+R         +KG   ++   + DN +        G S        K+ GGALWDIFRREDVPKLEAYLR+H  EFRH YCSPVEKVIHPIHDQSFYLT EHKR+LKE++GVEPWTFEQNLGEAVFIPAGCPHQVRNLKSCTKVA+DFVSP++I+ECLRLTEEFR+LPKNHRAREDKLE+
Sbjct:  643 EGFRHFQTRWAKGEPVIVKNTLANSSGLSWEPMVMWRALCK------RLEMPEVKAIDCLAGCEVEINTRQFFKGYTEGRAYNNLWPEMLKLKDWPPSDKFEDLLPRHCDEFISMLPFQEYCDPRSGILNLAVKLPNCVLKPDLGPKTYIAYGVAEELGRGDSVTKLHCDLSDAVNILTHTSEVALSDEQLAAMEKLKMKHKAQDEKESLERER--------LKKGFDESEATNWGDNILYVSSGEFRGASLPEPLTSRKDIGGALWDIFRREDVPKLEAYLREHYTEFRHTYCSPVEKVIHPIHDQSFYLTAEHKRRLKEKYGVEPWTFEQNLGEAVFIPAGCPHQVRNLKSCTKVALDFVSPENIQECLRLTEEFRKLPKNHRAREDKLEV 1021

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BLAST of g.arboreum_cottongen_reftransV1_0008458 vs. ExPASy TrEMBL
Match: B9RXG4_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0903610 PE=4 SV=1)

HSP 1 Score: 603.979 bits (1556), Expect = 0.000e+0
Identity = 289/424 (68.16%), Postives = 334/424 (78.77%), Query Frame = -3

Query:  226 EDLSHFQMKWAKGEPVIVRNALSNSTGLSWEPMVMWRALCETEDLHTSLEMSEVRAIDCLACCEVGINTYQFFKGYMEGRSYHNFWPEMLKLKDWPPSNNFEDLLPRHCDEFIRILPFQEYTDPRSGILNLAVKLPAGVLKPDLGPKTYIAYGISQELGRGDSVTKLHYDLSDAVNILTHTADVALGEEQLTAIEKLKMKHKAQDAKESLERDREDKHPINEGRKGI--------------TDQNRYSDNNIDELRA------RNSGHSKNTGGALWDIFRREDVPKLEAYLRKHSKEFRHIYCSPVEKVIHPIHDQSFYLTMEHKRKLKEEFGVEPWTFEQNLGEAVFIPAGCPHQVRNLKSCTKVAVDFVSPQSIKECLRLTEEFRQLPKNHRAREDKLEINKMIIYGVERAIRELSDLLST 1437
            ++L  FQ  W KGEPVIVR+ L  +T LSWEPMVMWRALCE  DL T+ +MSEV+AIDCLA C+V INT QFFKGY  GR+Y NFWPEMLKLKDWPPS+ FEDLLPRHCDEFI  LPFQEY+DP++GILN+AVK P G+LKPDLGPKTYIAYG  +ELGRGDSVTKLH D+SDAVNILTH  +VAL EEQ T IE+LKMKH AQD KE LERD+ + H I +  + I              T+++  +    +ELR            +  + GALWDIFRREDVPKLE YLRK+  EFRH YCSPVEKV+HPIHDQ FYLT+EHKRKLKEE+GVEPWTFEQ +GEA+FIPAGCPHQVRNLKSCTKVAVDFVSP++I ECL LTEEFRQLPKNHRAREDKLEI KMI+Y VE+AI++L  ++ +
Sbjct:  695 QELLRFQKHWLKGEPVIVRDTLEVTTHLSWEPMVMWRALCENVDLETNAKMSEVKAIDCLASCQVEINTRQFFKGYTGGRTYENFWPEMLKLKDWPPSDKFEDLLPRHCDEFISALPFQEYSDPKAGILNIAVKFPPGLLKPDLGPKTYIAYGTKEELGRGDSVTKLHCDMSDAVNILTHAVEVALSEEQSTCIEQLKMKHSAQDEKEYLERDKVNSHLIEQLDECIDSLSEDMDLLKIRETEKHSSALETDNELRGDTPTDESTGAATAGSSGALWDIFRREDVPKLEEYLRKYHMEFRHTYCSPVEKVVHPIHDQCFYLTLEHKRKLKEEYGVEPWTFEQRVGEAIFIPAGCPHQVRNLKSCTKVAVDFVSPENIHECLLLTEEFRQLPKNHRAREDKLEIKKMIVYAVEQAIKDLQKVICS 1118

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BLAST of g.arboreum_cottongen_reftransV1_0008458 vs. ExPASy TrEMBL
Match: A0A0D2NNM2_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_006G082600 PE=4 SV=1)

HSP 1 Score: 598.586 bits (1542), Expect = 0.000e+0
Identity = 282/293 (96.25%), Postives = 288/293 (98.29%), Query Frame = -3

Query:  562 KEDLSHFQMKWAKGEPVIVRNALSNSTGLSWEPMVMWRALCETEDLHTSLEMSEVRAIDCLACCEVGINTYQFFKGYMEGRSYHNFWPEMLKLKDWPPSNNFEDLLPRHCDEFIRILPFQEYTDPRSGILNLAVKLPAGVLKPDLGPKTYIAYGISQELGRGDSVTKLHYDLSDAVNILTHTADVALGEEQLTAIEKLKMKHKAQDAKESLERDREDKHPINEGRKGITDQNRYSDNNIDELRARNSGHSKNTGGALWDIFRREDVPKLEAYLRKHSKEFRHIYCSPVEKVIH 1440
            KEDLSHFQMKWAKGEPVIVRNAL+NSTGLSWEPMVMWRALCETEDLHTSLEMSEVRAIDCLACCEVGINTYQFFKGYMEGRSYHNFWPEMLKLKDWPPSNNFEDLLPRH DEFIRILPFQEYTDPRSGILNLAVKLP GVLKPDLGPKTYIAYGISQELGRGDSVTKLHYDLSDAVNILTHTADVALGEEQL AIEKLKMKHKAQDAKE LERDREDKHPINEGRKGITDQN+YSDNNID++ ARNSGHSKNTGGALWDIFRREDVPKLEAYLRKHSKEFRHIYCSPVE+VI+
Sbjct:  486 KEDLSHFQMKWAKGEPVIVRNALANSTGLSWEPMVMWRALCETEDLHTSLEMSEVRAIDCLACCEVGINTYQFFKGYMEGRSYHNFWPEMLKLKDWPPSNNFEDLLPRHYDEFIRILPFQEYTDPRSGILNLAVKLPPGVLKPDLGPKTYIAYGISQELGRGDSVTKLHYDLSDAVNILTHTADVALGEEQLAAIEKLKMKHKAQDAKEKLERDREDKHPINEGRKGITDQNQYSDNNIDDVGARNSGHSKNTGGALWDIFRREDVPKLEAYLRKHSKEFRHIYCSPVERVIY 778

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BLAST of g.arboreum_cottongen_reftransV1_0008458 vs. ExPASy TrEMBL
Match: R0GP80_9BRAS (Uncharacterized protein OS=Capsella rubella GN=CARUB_v10011915mg PE=4 SV=1)

HSP 1 Score: 598.201 bits (1541), Expect = 0.000e+0
Identity = 287/404 (71.04%), Postives = 329/404 (81.44%), Query Frame = -3

Query:  229 KEDLSHFQMKWAKGEPVIVRNALSNSTGLSWEPMVMWRALCETEDLHTSLEMSEVRAIDCLACCEVGINTYQFFKGYMEGRSYHNFWPEMLKLKDWPPSNNFEDLLPRHCDEFIRILPFQEYTDPRSGILNLAVKLPAGVLKPDLGPKTYIAYGISQELGRGDSVTKLHYDLSDAVNILTHTADVALGEEQLTAIEKLKMKHKAQDAKESLERDREDKHPINEGRKGITDQNRYSDNNIDELRARNSGHSKNTGGALWDIFRREDVPKLEAYLRKHSKEFRHIYCSPVEKVIHPIHDQSFYLTMEHKRKLKEEFGVEPWTFEQNLGEAVFIPAGCPHQVRNLKSCTKVAVDFVSPQSIKECLRLTEEFRQLPKNHRAREDKLEINKMIIYGVERAIRELSDLLS 1440
            +E+L HFQ  W+KGEPVIVRNAL+N+ GLSWEPMVMWRALCE  D  TS +M++V+AIDCLA CEV INT  FF+GY +GR Y NFWPEMLKLKDWPPS+ FE+LLPRHCDEFI  LPFQEY+DPRSGILN+A KLP G+LKPDLGPKTYIAYG S ELGRGDSVTKLH D+SDAVNIL HTA+V L EEQ  AIE LK KHK Q+ KE  E++       +EG++ ++ +N Y D               +TGGALWDIFRREDVPKLE YLRKH KEFRH +CSPV KV HPIHDQS +LT+EHKRKLK EFG+EPWTF Q LGEAVFIPAGCPHQVRNLKSCTKVAVDFVSP++I ECLRLT+EFRQLPKNH+AREDKLEI KM+IY VE+A++E+  LL+
Sbjct:  493 QEELLHFQEHWSKGEPVIVRNALNNTAGLSWEPMVMWRALCENVDSPTSTDMADVKAIDCLANCEVKINTRCFFEGYSKGRRYANFWPEMLKLKDWPPSDKFENLLPRHCDEFISALPFQEYSDPRSGILNIAAKLPEGLLKPDLGPKTYIAYGTSDELGRGDSVTKLHCDMSDAVNILMHTAEVTLTEEQRVAIEALKQKHKLQNEKELQEQNG------SEGKEIVSYENGYHD---------------DTGGALWDIFRREDVPKLEEYLRKHCKEFRHTFCSPVTKVYHPIHDQSCFLTVEHKRKLKAEFGIEPWTFVQKLGEAVFIPAGCPHQVRNLKSCTKVAVDFVSPENIDECLRLTDEFRQLPKNHKAREDKLEIKKMVIYAVEQALKEVETLLA 875

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BLAST of g.arboreum_cottongen_reftransV1_0008458 vs. ExPASy Swiss-Prot
Match: JMJ25_ARATH (Lysine-specific demethylase JMJ25 OS=Arabidopsis thaliana GN=JMJ25 PE=1 SV=1)

HSP 1 Score: 457.603 bits (1176), Expect = 1.573e-148
Identity = 228/401 (56.86%), Postives = 285/401 (71.07%), Query Frame = -3

Query:  241 KEDLSHFQMKWAKGEPVIVRNALSNSTGLSWEPMVMWRALCETEDL-HTSLEMSEVRAIDCLACCEVGINTYQFFKGYMEGRSYHNFWPEMLKLKDWPPSNNFEDLLPRHCDEFIRILPFQEYTDPRSGILNLAVKLPAGVLKPDLGPKTYIAYGISQELGRGDSVTKLHYDLSDAVNILTHTADVALGEEQLTAIEKLKMKHKAQDAKESLERDREDKHPINEGRKGITDQNRYSDNNIDELRARNSGHSKNTGGALWDIFRREDVPKLEAYLRKHSKEFRHIYCSPVEKVIHPIHDQSFYLTMEHKRKLKEEFGVEPWTFEQNLGEAVFIPAGCPHQVRNLKSCTKVAVDFVSPQSIKECLRLTEEFRQLPKNHRAREDKLEINKMIIYGVERAIRELS 1440
            ++DL HFQ  W KGEPVIVRN L  ++GLSWEPMVM RA  +   + H SL+  +V A+DCL  CEV +N ++FF GY +GR     WP +LKLKDWPP+  F+D LPRH +EF+  LP + YT P +G LNLAVKLP   LKPD+GPKTY+A G +QELGRGDSVTKLH D+SDAVNILTH ++V         I  LK KH  QD KE L     +K  + E    I + +R    N++              GALWDIFRRED+PKLE+Y+ KH KEFRH+YC PV +V+HPIHDQ+FYLT  H  KLKEE+G+EPWTF Q LG+AV IP GCPHQVRNLKSC KVA+DFVSP+++ ECLRLT+++R LP NH A+EDKL + KMI++ V++A+R+LS
Sbjct:  512 QDDLKHFQHHWVKGEPVIVRNVLEATSGLSWEPMVMHRACRQISHVQHGSLK--DVVAVDCLDFCEVKVNLHEFFTGYTDGRYDRMGWPLVLKLKDWPPAKVFKDNLPRHAEEFLCSLPLKHYTHPVNGPLNLAVKLPQNCLKPDMGPKTYVASGFAQELGRGDSVTKLHCDMSDAVNILTHISEVP---NMQPGIGNLKKKHAEQDLKE-LYSSVANKEEMME----ILENSRQQVQNVE-----------TDDGALWDIFRREDIPKLESYIEKHHKEFRHLYCCPVSQVVHPIHDQNFYLTRYHIMKLKEEYGIEPWTFNQKLGDAVLIPVGCPHQVRNLKSCNKVALDFVSPENVSECLRLTKQYRLLPPNHFAKEDKLGVKKMIVHAVDKALRDLS 891

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BLAST of g.arboreum_cottongen_reftransV1_0008458 vs. ExPASy Swiss-Prot
Match: KDM3B_HUMAN (Lysine-specific demethylase 3B OS=Homo sapiens GN=KDM3B PE=1 SV=2)

HSP 1 Score: 220.32 bits (560), Expect = 2.789e-60
Identity = 139/397 (35.01%), Postives = 197/397 (49.62%), Query Frame = -3

Query:  244 FQMKWAKGEPVIVRNALSNSTGLSWEPMVMWRALCETEDLHTSLEMSEVRAIDCLACCEVG-INTYQFFKGY---MEGRSYHNFWPEMLKLKDWPPSNNFEDLLPRHCDEFIRILPFQEYTDPRSGILNLAVKLPAGVLKPDLGPKTYIAYGISQELGRGDSVTKLHYDLSDAVNILTHTADVALGEEQLTAIEKLKMKHKAQDAKESLERDREDKHPINEGRKGITDQNRYSDNNIDELRARNSGHSKNTGGALWDIFRREDVPKLEAYLRKHSKEFRHIYCSPVEKVIHPIHDQSFYLTMEHKRKLKEEFGVEPWTFEQNLGEAVFIPAGCPHQVRNLKSCTKVAVDFVSPQSIKECLRLTEEFRQLPKNHRAREDKLEINKMIIYGVERAIREL 1422
            F+  W +G+PV+V           W+P          E         +V  ++C  C  +  +    F+ G+    +     +  P +LKLKDWPP  +F D++P   ++ +  LP  EYT  R G LNLA +LP+  ++PDLGPK Y AYG+     R    T LH D+SDAVN++ +   + +GE                        D E    I+EG             + DE+  +     K   GALW I+  +D  K+   LRK  +E      +P +    PIHDQS+YL    +++L EE+GV+ W   Q LG+AVFIPAG PHQV NL SC KVA DFVSP+ +K C RLT+EFR L   H   EDKL++  +I + V+ A+  L
Sbjct: 1405 FRECWKQGQPVLVSGVHKKLKSELWKP----------EAFSQEFGDQDVDLVNCRNCAIISDVKVRDFWDGFEIICKRLRSEDGQPMVLKLKDWPPGEDFRDMMPTRFEDLMENLPLPEYTK-RDGRLNLASRLPSYFVRPDLGPKMYNAYGLITAEDRRVGTTNLHLDVSDAVNVMVYVG-IPIGEGA---------------------HDEEVLKTIDEG-------------DADEVTKQRIHDGKEKPGALWHIYAAKDAEKIRELLRKVGEE--QGQENPPDH--DPIHDQSWYLDQTLRKRLYEEYGVQGWAIVQFLGDAVFIPAGAPHQVHNLYSCIKVAEDFVSPEHVKHCFRLTQEFRHLSNTHTNHEDKLQVKNIIYHAVKDAVGTL 1751

[Close]

BLAST of g.arboreum_cottongen_reftransV1_0008458 vs. ExPASy Swiss-Prot
Match: KDM3B_MOUSE (Lysine-specific demethylase 3B OS=Mus musculus GN=Kdm3b PE=2 SV=2)

HSP 1 Score: 219.164 bits (557), Expect = 6.342e-60
Identity = 139/397 (35.01%), Postives = 197/397 (49.62%), Query Frame = -3

Query:  244 FQMKWAKGEPVIVRNALSNSTGLSWEPMVMWRALCETEDLHTSLEMSEVRAIDCLACCEVG-INTYQFFKGY---MEGRSYHNFWPEMLKLKDWPPSNNFEDLLPRHCDEFIRILPFQEYTDPRSGILNLAVKLPAGVLKPDLGPKTYIAYGISQELGRGDSVTKLHYDLSDAVNILTHTADVALGEEQLTAIEKLKMKHKAQDAKESLERDREDKHPINEGRKGITDQNRYSDNNIDELRARNSGHSKNTGGALWDIFRREDVPKLEAYLRKHSKEFRHIYCSPVEKVIHPIHDQSFYLTMEHKRKLKEEFGVEPWTFEQNLGEAVFIPAGCPHQVRNLKSCTKVAVDFVSPQSIKECLRLTEEFRQLPKNHRAREDKLEINKMIIYGVERAIREL 1422
            F+  W +G+PV+V           W+P          E         +V  ++C  C  +  +    F+ G+    +     +  P +LKLKDWPP  +F D++P   ++ +  LP  EYT  R G LNLA +LP+  ++PDLGPK Y AYG+     R    T LH D+SDAVN++ +   + +GE                        D E    I+EG             + DE+  +     K   GALW I+  +D  K+   LRK  +E      +P +    PIHDQS+YL    +++L EE+GV+ W   Q LG+AVFIPAG PHQV NL SC KVA DFVSP+ +K C RLT+EFR L   H   EDKL++  +I + V+ A+  L
Sbjct: 1206 FRECWKQGQPVLVSGVHKKLKSELWKP----------EAFSQEFGDQDVDLVNCRNCAIISDVKVRDFWDGFEIICKRLRSEDGQPMVLKLKDWPPGEDFRDMMPTRFEDLMENLPLPEYTK-RDGRLNLASRLPSYFVRPDLGPKMYNAYGLITAEDRRVGTTNLHLDVSDAVNVMVYVG-IPVGEGA---------------------HDEEVLKTIDEG-------------DADEVTKQRIHDGKEKPGALWHIYAAKDAEKIRELLRKVGEE--QGQENPPDH--DPIHDQSWYLDQILRKRLFEEYGVQGWAIVQFLGDAVFIPAGAPHQVHNLYSCIKVAEDFVSPEHVKHCFRLTQEFRHLSNTHTNHEDKLQVKNIIYHAVKDAVGTL 1552

[Close]

BLAST of g.arboreum_cottongen_reftransV1_0008458 vs. ExPASy Swiss-Prot
Match: KDM3A_HUMAN (Lysine-specific demethylase 3A OS=Homo sapiens GN=KDM3A PE=1 SV=4)

HSP 1 Score: 214.927 bits (546), Expect = 1.182e-58
Identity = 137/401 (34.16%), Postives = 200/401 (49.88%), Query Frame = -3

Query:  244 KEDLSHFQMKWAKGEPVIVRNALSNSTGLSWEPMVMWRALCETEDLHTSLEMSEVRAIDCLACCEVGINTYQFFKGY--MEGRSYHNFWPEMLKLKDWPPSNNFEDLLPRHCDEFIRILPFQEYTDPRSGILNLAVKLPAGVLKPDLGPKTYIAYGISQELGRGDSVTKLHYDLSDAVNILTHTADVALGEEQLTAIEKLKMKHKAQDAKESLERDREDKHPINEGRKGITDQNRYSDNNIDELRARNSGHSKNTGGALWDIFRREDVPKLEAYLRKHSKEFRHIYCSPVEKVIHPIHDQSFYLTMEHKRKLKEEFGVEPWTFEQNLGEAVFIPAGCPHQVRNLKSCTKVAVDFVSPQSIKECLRLTEEFRQLPKNHRAREDKLEINKMIIYGVERAIREL 1440
            K + + F+  W +G+PV+V           W+P    +   E E     +++   R  + +    VG     F+ G+  +  R  +   P +LKLKDWPP  +F D++P   D+ +  +P  EYT  R G LNLA +LP   ++PDLGPK Y AYG+     R    T LH D+SDA N++ +                          K   E++ E    I +G             + DEL  +     K   GALW I+  +D  K+  +L+K S+E      +P +    PIHDQS+YL    +++L +E+GV+ W   Q LG+ VFIPAG PHQV NL SC KVA DFVSP+ +K C  LT+EFR L + H   EDKL++  +I + V+ A+  L
Sbjct:  960 KSNWNVFRECWKQGQPVMVSGVHHKLNSELWKPESFRKEFGEQE-----VDLVNCRTNEIITGATVG----DFWDGFEDVPNRLKNEKEPMVLKLKDWPPGEDFRDMMPSRFDDLMANIPLPEYTR-RDGKLNLASRLPNYFVRPDLGPKMYNAYGLITPEDRKYGTTNLHLDVSDAANVMVYVGI----------------------PKGQCEQEEEVLKTIQDG-------------DSDELTIKRFIEGKEKPGALWHIYAAKDTEKIREFLKKVSEEQGQE--NPADH--DPIHDQSWYLDRSLRKRLHQEYGVQGWAIVQFLGDVVFIPAGAPHQVHNLYSCIKVAEDFVSPEHVKHCFWLTQEFRYLSQTHTNHEDKLQVKNVIYHAVKDAVAML 1311

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BLAST of g.arboreum_cottongen_reftransV1_0008458 vs. ExPASy Swiss-Prot
Match: KDM3A_CHICK (Lysine-specific demethylase 3A OS=Gallus gallus GN=KDM3A PE=2 SV=1)

HSP 1 Score: 214.157 bits (544), Expect = 1.882e-58
Identity = 134/393 (34.10%), Postives = 196/393 (49.87%), Query Frame = -3

Query:  253 FQMKWAKGEPVIVRNALSNSTGLSWEPMVMWRALCETEDLHTSLEMSEVRAIDCLACCEVGINTYQFFKGYMEGRS---YHNFWPEMLKLKDWPPSNNFEDLLPRHCDEFIRILPFQEYTDPRSGILNLAVKLPAGVLKPDLGPKTYIAYGISQELGRGDSVTKLHYDLSDAVNILTHTADVALGEEQLTAIEKLKMKHKAQDAKESLERDREDKHPINEGRKGITDQNRYSDNNIDELRARNSGHSKNTGGALWDIFRREDVPKLEAYLRKHSKEFRHIYCSPVEKVIHPIHDQSFYLTMEHKRKLKEEFGVEPWTFEQNLGEAVFIPAGCPHQVRNLKSCTKVAVDFVSPQSIKECLRLTEEFRQLPKNHRAREDKLEINKMIIYGVERAI 1422
            F+  W +G+PV+V           W P    +   + E     +++   R  + +    VG     F+ G+ +  S        P +LKLKDWPP  +F D++P   D+ ++ +P  EYT  R G LNLA +LP   ++PDLGPK Y AYG+     R    T LH D+SDA N++ +                   K +A   +E L+                       D + DEL  +    S+   GALW I+  +D  K+  +L+K ++E      +PV+    PIHDQS+YL    +++L +E+GV+ W   Q LG+ VFIPAG PHQV NL SC KVA DFVSP+ +K C  LT+EFR L   H   EDKL++  +I + V+ A+
Sbjct:  969 FRECWKQGQPVMVSGVHHKLNADLWRPESFRKEFGQQE-----VDLVNCRTNEIITGATVG----DFWDGFEDISSRLRTEEGEPMVLKLKDWPPGEDFRDMMPSRFDDLMKNIPLPEYTR-RGGKLNLASRLPNYFVRPDLGPKMYNAYGLITPEDRKYGTTNLHLDVSDAANVMVYVG---------------IPKGQADQEEEVLKT--------------------IQDGDSDELTIKRFTESREKPGALWHIYAAKDTEKIREFLKKVAEE--QGQENPVDH--DPIHDQSWYLDRSLRKRLHQEYGVQGWAIVQFLGDVVFIPAGAPHQVHNLYSCIKVAEDFVSPEHVKHCFWLTQEFRYLSHTHTNHEDKLQVKNVIYHAVKDAV 1312

[Close]

BLAST of g.arboreum_cottongen_reftransV1_0008458 vs. ExPASy Swiss-Prot
Match: KD3AA_XENLA (Lysine-specific demethylase 3A-A OS=Xenopus laevis GN=kdm3a-a PE=2 SV=1)

HSP 1 Score: 213.772 bits (543), Expect = 2.659e-58
Identity = 147/417 (35.25%), Postives = 207/417 (49.64%), Query Frame = -3

Query:  199 KEDLSHFQMKWAKGEPVIVRNALSNSTGLSWEPMVMWRALCETEDLHTSLEMSEVRAIDCLACCEVGINTYQFFKGY--MEGRSYHNFWPEM-LKLKDWPPSNNFEDLLPRHCDEFIRILPFQEYTDPRSGILNLAVKLPAGVLKPDLGPKTYIAYGISQELGRGDSVTKLHYDLSDAVNILTHTADVALGEEQLTAIEKLKMKHKAQDAKESLERDREDKHPINEGRKGITDQNRYSDNNIDELRARNSGHSKNTGGALWDIFRREDVPKLEAYLRKHSKEFRHIYCSPVEKVIHPIHDQSFYLTMEHKRKLKEEFGVEPWTFEQNLGEAVFIPAGCPHQVRNLKSCTKVAVDFVSPQSIKECLRLTEEFRQLPKNHRAREDKLEINKMIIYGVERAIRELSDLLSTPN*ASLCKL 1440
            K + + F+  W +G+PVIV    +N     W P    R   + E      ++   R  D +    VG     F++G+  +  R  ++    M LKLKDWPP  +F D +    ++ +  +P  EYT  R G LNLA +LPA  ++PDLGPK Y AYG+     R    T LH D+SDA N++ +   +  GE                D ++ + R                      D + DEL  +     K   GALW IF  +D  K+  +L+K ++E  H   +P +    PIHDQS+YL    +++L +E GV+ W   Q LG+AVFIPAG PHQV NL SC KVA DFVSP+ +K C  LT+EFR L   H   EDKL++  +I + V+ +I  L       N ASL KL
Sbjct:  969 KSNWNVFRECWKQGQPVIVSGIHNNLNSELWRPESFRREFGDQE-----ADLVNCRTNDIITGATVG----DFWEGFEDISARLKNDKGEAMVLKLKDWPPGEDFRDTMLSRFEDLMNNIPLPEYTR-REGKLNLAARLPAYFVRPDLGPKMYNAYGLITPEDRKYGTTNLHLDVSDATNVMVYVG-IPKGE---------------HDQEQEVIR-------------------TIQDGDADELTIKRYIEFKEKPGALWHIFAAKDTEKIRQFLKKVAEEQGHE--NPPDH--DPIHDQSWYLDNTLRKRLLQEHGVQGWAIVQFLGDAVFIPAGAPHQVHNLYSCIKVAEDFVSPEHVKHCFWLTQEFRYLSHTHTNHEDKLQVKNVIYHAVKDSIAILK-----ANEASLGKL 1331

[Close]

BLAST of g.arboreum_cottongen_reftransV1_0008458 vs. ExPASy Swiss-Prot
Match: KDM3A_RAT (Lysine-specific demethylase 3A OS=Rattus norvegicus GN=Kdm3a PE=2 SV=1)

HSP 1 Score: 211.846 bits (538), Expect = 9.372e-58
Identity = 136/403 (33.75%), Postives = 200/403 (49.63%), Query Frame = -3

Query:  244 KEDLSHFQMKWAKGEPVIVRNALSNSTGLSWEPMVMWRALCETEDLHTSLEMSEVRAIDCLACCEVGINTYQFFKGYMEG----RSYHNFWPEMLKLKDWPPSNNFEDLLPRHCDEFIRILPFQEYTDPRSGILNLAVKLPAGVLKPDLGPKTYIAYGISQELGRGDSVTKLHYDLSDAVNILTHTADVALGEEQLTAIEKLKMKHKAQDAKESLERDREDKHPINEGRKGITDQNRYSDNNIDELRARNSGHSKNTGGALWDIFRREDVPKLEAYLRKHSKEFRHIYCSPVEKVIHPIHDQSFYLTMEHKRKLKEEFGVEPWTFEQNLGEAVFIPAGCPHQVRNLKSCTKVAVDFVSPQSIKECLRLTEEFRQLPKNHRAREDKLEINKMIIYGVERAIREL 1440
            K + + F+  W +G+PV+V           W+P    +   E E     +++   R  + +    VG     F+ G+ +     ++     P +LKLKDWPP  +F D++P   D+ +  +P  EYT  R G LNLA +LP   ++PDLGPK Y AYG+     R    T LH D+SDA N++ +                          K   E++ E    I +G             + DEL  +     K   GALW I+  +D  K+  +L+K S+E      +P +    PIHDQS+YL    +++L +E+GV+ W   Q LG+ VFIPAG PHQV NL SC KVA DFVSP+ +K C  LT+EFR L + H   EDKL++  +I + V+ A+  L
Sbjct:  844 KSNWNVFRECWKQGQPVMVSGVHHKLNTELWKPESFRKEFGEQE-----VDLVNCRTNEIITGATVG----DFWDGFEDVPNRLKNEKEKEPMVLKLKDWPPGEDFRDMMPSRFDDLMANIPLPEYTR-RDGKLNLASRLPNYFVRPDLGPKMYNAYGLITPEDRKYGTTNLHLDVSDAANVMVYVGI----------------------PKGQCEQEEEVLRTIQDG-------------DSDELTIKRFIEGKEKPGALWHIYAAKDTEKIREFLKKVSEEQGQE--NPADH--DPIHDQSWYLDRSLRKRLYQEYGVQGWAIVQFLGDVVFIPAGAPHQVHNLYSCIKVAEDFVSPEHVKHCFWLTQEFRHLSQTHTNHEDKLQVKNVIYHAVKDAVAML 1197

[Close]

BLAST of g.arboreum_cottongen_reftransV1_0008458 vs. ExPASy Swiss-Prot
Match: KDM3A_MOUSE (Lysine-specific demethylase 3A OS=Mus musculus GN=Kdm3a PE=1 SV=1)

HSP 1 Score: 211.846 bits (538), Expect = 1.267e-57
Identity = 136/403 (33.75%), Postives = 200/403 (49.63%), Query Frame = -3

Query:  244 KEDLSHFQMKWAKGEPVIVRNALSNSTGLSWEPMVMWRALCETEDLHTSLEMSEVRAIDCLACCEVGINTYQFFKGYMEG----RSYHNFWPEMLKLKDWPPSNNFEDLLPRHCDEFIRILPFQEYTDPRSGILNLAVKLPAGVLKPDLGPKTYIAYGISQELGRGDSVTKLHYDLSDAVNILTHTADVALGEEQLTAIEKLKMKHKAQDAKESLERDREDKHPINEGRKGITDQNRYSDNNIDELRARNSGHSKNTGGALWDIFRREDVPKLEAYLRKHSKEFRHIYCSPVEKVIHPIHDQSFYLTMEHKRKLKEEFGVEPWTFEQNLGEAVFIPAGCPHQVRNLKSCTKVAVDFVSPQSIKECLRLTEEFRQLPKNHRAREDKLEINKMIIYGVERAIREL 1440
            K + + F+  W +G+PV+V           W+P    +   E E     +++   R  + +    VG     F+ G+ +     ++     P +LKLKDWPP  +F D++P   D+ +  +P  EYT  R G LNLA +LP   ++PDLGPK Y AYG+     R    T LH D+SDA N++ +                          K   E++ E    I +G             + DEL  +     K   GALW I+  +D  K+  +L+K S+E      +P +    PIHDQS+YL    +++L +E+GV+ W   Q LG+ VFIPAG PHQV NL SC KVA DFVSP+ +K C  LT+EFR L + H   EDKL++  +I + V+ A+  L
Sbjct:  960 KSNWNVFRECWKQGQPVMVSGVHHKLNTELWKPESFRKEFGEQE-----VDLVNCRTNEIITGATVG----DFWDGFEDVPNRLKNDKEKEPMVLKLKDWPPGEDFRDMMPSRFDDLMANIPLPEYTR-RDGKLNLASRLPNYFVRPDLGPKMYNAYGLITPEDRKYGTTNLHLDVSDAANVMVYVGI----------------------PKGQCEQEEEVLRTIQDG-------------DSDELTIKRFIEGKEKPGALWHIYAAKDTEKIREFLKKVSEEQGQD--NPADH--DPIHDQSWYLDRSLRKRLYQEYGVQGWAIVQFLGDVVFIPAGAPHQVHNLYSCIKVAEDFVSPEHVKHCFWLTQEFRYLSQTHTNHEDKLQVKNVIYHAVKDAVAML 1313

[Close]

BLAST of g.arboreum_cottongen_reftransV1_0008458 vs. ExPASy Swiss-Prot
Match: KD3AB_XENLA (Lysine-specific demethylase 3A-B OS=Xenopus laevis GN=kdm3a-b PE=2 SV=1)

HSP 1 Score: 210.69 bits (535), Expect = 3.016e-57
Identity = 140/402 (34.83%), Postives = 202/402 (50.25%), Query Frame = -3

Query:  244 KEDLSHFQMKWAKGEPVIVRNALSNSTGLSWEPMVMWRALCETEDLHTSLEMSEVRAIDCLACCEVGINTYQFFKGY--MEGRSYHNFWPEM-LKLKDWPPSNNFEDLLPRHCDEFIRILPFQEYTDPRSGILNLAVKLPAGVLKPDLGPKTYIAYGISQELGRGDSVTKLHYDLSDAVNILTHTADVALGEEQLTAIEKLKMKHKAQDAKESLERDREDKHPINEGRKGITDQNRYSDNNIDELRARNSGHSKNTGGALWDIFRREDVPKLEAYLRKHSKEFRHIYCSPVEKVIHPIHDQSFYLTMEHKRKLKEEFGVEPWTFEQNLGEAVFIPAGCPHQVRNLKSCTKVAVDFVSPQSIKECLRLTEEFRQLPKNHRAREDKLEINKMIIYGVERAIREL 1440
            K + + F+  W +G+PV+V    +N     W P    R   + E      ++   R  D +    VG     F+ G+  + GR  ++    M LKLKDWPP  +F D +    ++ +  +P  EYT  R G LNLA +LP   ++PDLGPK Y AYG+     R    T LH D+SDA N++ +   +  GE                      ++D+E    I +G             + DEL  +     K   GALW I+  +D  K+  +L+K ++E  H   +P +    PIHDQS+YL    +++L +E GV+ W   Q LG+AVFIPAG PHQV NL SC KVA DFVSP+ +K C  LT+EFR L   H   EDKL++  +I + V+ +I  L
Sbjct:  972 KSNWNVFRECWKQGQPVMVSGVHNNLNSELWRPESFRREFGDQE-----ADLVNCRTNDIITGATVG----DFWDGFEDIPGRLKNDTGESMVLKLKDWPPGEDFRDTMLSRFEDLMNNIPLPEYTR-REGKLNLAARLPTYFVRPDLGPKMYNAYGLITPEDRKYGTTNLHLDVSDAANVMVYVG-IPKGEH---------------------DQDQEVLRTIQDG-------------DADELTIKRFIEFKEKPGALWHIYAAKDTEKIRQFLKKVAEEEGHE--NPPDH--DPIHDQSWYLDNILRKRLLQEHGVQGWAIVQFLGDAVFIPAGAPHQVHNLYSCIKVAEDFVSPEHVKHCFCLTQEFRYLSHTHTNHEDKLQVKNVIYHAVKDSIAIL 1324

[Close]

BLAST of g.arboreum_cottongen_reftransV1_0008458 vs. ExPASy Swiss-Prot
Match: JHD2C_HUMAN (Probable JmjC domain-containing histone demethylation protein 2C OS=Homo sapiens GN=JMJD1C PE=1 SV=2)

HSP 1 Score: 170.244 bits (430), Expect = 3.027e-43
Identity = 118/396 (29.80%), Postives = 192/396 (48.48%), Query Frame = -3

Query:  244 FQMKWAKGEPVIVRNALSNSTGLSWEPMVMWRALCETEDLHTSLEMSEVRAIDCLACCEVGINTYQFFKGYME-GRSYHNFWPE--MLKLKDWPPSNNFEDLLPRHCDEFIRILPFQEYTDPRSGILNLAVKLPAGVLKPDLGPKTYIAYGISQELGRGDSVTKLHYDLSDAVNILTHTADVALGEEQLTAIEKLKMKHKAQDAKESLERDREDKHPINEGRKGITDQNRYSDNNIDELRARNSGHSKNTGGALWDIFRREDVPKLEAYLRKHSKEFRHIYCSPVEKVIHPIHDQSFYLTMEHKRKLKEEFGVEPWTFEQNLGEAVFIPAGCPHQVRNLKSCTKVAVDFVSPQSIKECLRLTEEFRQLPKNHRAREDKLEINKMIIYGVERAIREL 1422
            F+  W +G+P +V + +     +S     +W+A    E +       +   ++C        N  +F+ G+ E  +   N   E  +LKLKDWP   +F+ ++P   ++ ++ LP  EY +P  G  NLA  LP   ++PDLGP+   AYG+          T LH ++SD VNIL +   +A G   L+    LK                                 ++ + ++D++  +    S    GALW I+  +DV K+  +L+K SKE + +   P      PI DQS+Y+  + +++L EE+GV   T  Q LG+A+ +PAG  HQV+N  SC +V  DFVSP+ + E   LT+E R L K     +DKL++  ++ + V+  +R L
Sbjct: 2182 FKECWKQGQPAVV-SGVHKKMNIS-----LWKA----ESISLDFGDHQADLLNCKDSIISNANVKEFWDGFEEVSKRQKNKSGETVVLKLKDWPSGEDFKTMMPARYEDLLKSLPLPEYCNPE-GKFNLASHLPGFFVRPDLGPRLCSAYGVVAAKDHDIGTTNLHIEVSDVVNILVYVG-IAKGNGILSKAGILK---------------------------------KFEEEDLDDILRKRLKDSSEIPGALWHIYAGKDVDKIREFLQKISKE-QGLEVLPEHD---PIRDQSWYVNKKLRQRLLEEYGVRTCTLIQFLGDAIVLPAGALHQVQNFHSCIQVTEDFVSPEHLVESFHLTQELRLL-KEEINYDDKLQVKNILYHAVKEMVRAL 2527

The following BLAST results are available for this feature:

BLAST of g.arboreum_cottongen_reftransV1_0008458 vs. ExPASy TrEMBL
BLAST of g.arboreum_cottongen_reftransV1_0008458 vs. ExPASy Swiss-Prot

BLAST of g.arboreum_cottongen_reftransV1_0008458 vs. ExPASy TrEMBL
Analysis Date: 2016-11-15 (Homology Analysis for Gossypium arboreum CottonGen RefTrans V1 vs TrEMBL)
Total hits: 25


Match Name	E-value	Identity	Description
A0A0B0PN99_GOSAR	0.000e+0	100.00	Lysine-specific demethylase 3B OS=Gossypium arbore...	[more]
A0A0D2RS62_GOSRA	0.000e+0	97.30	Uncharacterized protein OS=Gossypium raimondii GN=...	[more]
A0A061GNU1_THECC	0.000e+0	81.16	Transcription factor jumonji domain-containing pro...	[more]
A0A0D2Q5J8_GOSRA	0.000e+0	96.83	Uncharacterized protein OS=Gossypium raimondii GN=...	[more]
V4TR56_9ROSI	0.000e+0	69.39	Uncharacterized protein OS=Citrus clementina GN=CI...	[more]
A0A067GSB7_CITSI	0.000e+0	69.16	Uncharacterized protein OS=Citrus sinensis GN=CISI...	[more]
A0A0D2T0K3_GOSRA	0.000e+0	74.55	Uncharacterized protein OS=Gossypium raimondii GN=...	[more]
B9RXG4_RICCO	0.000e+0	68.16	Putative uncharacterized protein OS=Ricinus commun...	[more]
A0A0D2NNM2_GOSRA	0.000e+0	96.25	Uncharacterized protein OS=Gossypium raimondii GN=...	[more]
R0GP80_9BRAS	0.000e+0	71.04	Uncharacterized protein OS=Capsella rubella GN=CAR...	[more]

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BLAST of g.arboreum_cottongen_reftransV1_0008458 vs. ExPASy Swiss-Prot
Analysis Date: 2016-11-15 (Homology Analysis for Gossypium arboreum CottonGen RefTrans V1 vs SwissProt)
Total hits: 14


Match Name	E-value	Identity	Description
JMJ25_ARATH	1.573e-148	56.86	Lysine-specific demethylase JMJ25 OS=Arabidopsis t...	[more]
KDM3B_HUMAN	2.789e-60	35.01	Lysine-specific demethylase 3B OS=Homo sapiens GN=...	[more]
KDM3B_MOUSE	6.342e-60	35.01	Lysine-specific demethylase 3B OS=Mus musculus GN=...	[more]
KDM3A_HUMAN	1.182e-58	34.16	Lysine-specific demethylase 3A OS=Homo sapiens GN=...	[more]
KDM3A_CHICK	1.882e-58	34.10	Lysine-specific demethylase 3A OS=Gallus gallus GN...	[more]
KD3AA_XENLA	2.659e-58	35.25	Lysine-specific demethylase 3A-A OS=Xenopus laevis...	[more]
KDM3A_RAT	9.372e-58	33.75	Lysine-specific demethylase 3A OS=Rattus norvegicu...	[more]
KDM3A_MOUSE	1.267e-57	33.75	Lysine-specific demethylase 3A OS=Mus musculus GN=...	[more]
KD3AB_XENLA	3.016e-57	34.83	Lysine-specific demethylase 3A-B OS=Xenopus laevis...	[more]
JHD2C_HUMAN	3.027e-43	29.80	Probable JmjC domain-containing histone demethylat...	[more]

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InterPro

Analysis Name: InterProScan analysis for Gossypium arboreum CottonGen RefTrans V1
Date Performed: 2016-11-14


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003347	JmjC domain	SMART	SM00558	cupin_9	coord: 98..361 e-value: 5.1E-76 score: 268.5
IPR003347	JmjC domain	PFAM	PF02373	JmjC	coord: 243..344 e-value: 2.0E-15 score: 57.1
IPR003347	JmjC domain	PROSITE	PS51184	JMJC	coord: 117..361 score: 27.94
None	No IPR available	GENE3D	2.60.120.650		coord: 272..344 e-value: 5.1E-6 score: 25.8 coord: 147..184 e-value: 5.1E-6 score: 25.8 coord: 5..95 e-value: 5.1E-6 score: 25.8
None	No IPR available	PANTHER	PTHR12549:SF16	HISTONE H3MK9 DEMETHYLASE	coord: 3..396
None	No IPR available	PANTHER	PTHR12549	JMJC DOMAIN-CONTAINING HISTONE DEMETHYLATION PROTEIN	coord: 3..396
None	No IPR available	SUPERFAMILY	51197	Clavaminate synthase-like	coord: 3..173 coord: 246..379

Sequences

The following sequences are available for this feature:

contig sequence

contig sequence

>g.arboreum_cottongen_reftransV1_0008458 ID=g.arboreum_cottongen_reftransV1_0008458; Name=g.arboreum_cottongen_reftransV1_0008458; organism=Gossypium arboreum; type=contig; length=1442bp
GGAAAACTTATCTATCGATTGGAATGGCCAAAAAAAATTAACAGAGGCTG
CCTCTAGGCCCCGAATGTGCAAAAAGTTAAAATTTTAGGGGCCACAATAT
AGAACTTAACCCGTTATGCATGAATTAACAGTAAGCTATATGTTCTTCAT
TGCTGGATCAACAGAAAGGAAACGCCGGTTCCAATGGTACAGATGGAGAA
GCTTGCAAAGAGAGGCTCAATTTGGGGTTGATAGTAGATCTGATAACTCT
CGAATTGCCCGTTCTACTCCATAAATTATCATTTTGTTGATCTCGAGTTT
GTCTTCTCTGGCTCTATGGTTCTTTGGTAGTTGGCGGAACTCCTCAGTTA
ATCGGAGGCATTCCTTGATGCTCTGGGGAGATACAAAGTCCACAGCAACT
TTGGTGCATGACTTCAGATTCCTAACTTGGTGCGGACATCCGGCAGGAAT
AAAAACTGCCTCTCCAAGGTTTTGTTCGAACGTCCATGGCTCAACTCCAA
ATTCCTCCTTCAATTTCCTTTTGTGCTCCATGGTGAGGTAAAACGATTGG
TCATGAATTGGATGGATTACCTTTTCAACTGGGGAGCAATAGATATGCCT
GAATTCTTTAGAATGCTTTCTAAGATAAGCTTCCAGTTTAGGAACATCCT
CCCTTCTGAAAATGTCCCAAAGCGCACCACCTGTGTTCTTTGAGTGGCCT
GAATTTCTAGCTCTGAGCTCATCTATGTTATTATCCGAGTACCGATTCTG
ATCTGTGATTCCTTTTCTGCCTTCATTAATTGGATGCTTGTCTTCTCTAT
CTCTCTCTAAACTTTCCTTTGCATCCTGTGCCTTGTGTTTCATTTTCAAT
TTTTCTATTGCAGTAAGCTGCTCCTCACCTAAGGCTACATCTGCAGTATG
TGTCAAAATATTTACCGCATCTGACAGGTCATAGTGAAGCTTGGTGACTG
AGTCCCCTCTTCCAAGCTCCTGTGAAATCCCATAAGCAATGTATGTTTTT
GGGCCCAAGTCTGGTTTCAGGACACCAGCTGGCAACTTGACAGCAAGGTT
AAGGATACCGGACCTAGGATCAGTGTATTCTTGAAATGGCAATATCCTTA
TAAATTCATCACAATGCCGAGGCAAAAGATCCTCAAAGTTATTAGACGGC
GGCCAATCCTTTAACTTTAGCATCTCTGGCCAGAAGTTATGATAACTTCT
TCCTTCCATATAGCCTTTGAAAAATTGGTAAGTATTAATCCCCACCTCAC
AGCAGGCTAGACAATCAATAGCCCTAACTTCAGACATCTCCAAACTAGTA
TGTAAATCCTCTGTTTCACATAAAGCTCGCCACATTACCATTGGTTCCCA
ACTTAAACCAGTTGAATTTGAAAGAGCATTGCGAACAATAACTGGTTCAC
CTTTAGCCCATTTCATTTGAAAGTGAGAAAGGTCTTCCTTTT

Annotated Terms

The following terms have been associated with this contig:

Vocabulary: **INTERPRO**
Term	Definition
IPR003347	JmjC_dom

Search form

g.arboreum_cottongen_reftransV1_0008458, g.arboreum_cottongen_reftransV1_0008458 (contig) Gossypium arboreum

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