g.arboreum_cottongen_reftransV1_0007630, g.arboreum_cottongen_reftransV1_0007630 (contig) Gossypium arboreum

Overview
Nameg.arboreum_cottongen_reftransV1_0007630
Unique Nameg.arboreum_cottongen_reftransV1_0007630
Typecontig
OrganismGossypium arboreum (Tree cotton)
Sequence length1026
Alignments
The following features are aligned
Feature Name Type LocationAnalysisReference
Chr10chromosomeg.arboreum_cottongen_reftransV1_0007630:1..1026 .
Chr10:21998179..21999204 +
n/a
Homology
BLAST of g.arboreum_cottongen_reftransV1_0007630 vs. ExPASy TrEMBL
Match: A0A0B0P6D3_GOSAR (Serine/threonine-protein kinase Nek5 OS=Gossypium arboreum GN=F383_26569 PE=4 SV=1)

HSP 1 Score: 615.15 bits (1585), Expect = 0.000e+0
Identity = 326/326 (100.00%), Postives = 326/326 (100.00%), Query Frame = 2
Query:    2 TEESSPTKDLFHFTSVDAKVSLNAPVDLPGAVSEEIYVHKDDSTSSWTISRHDASLIQTSYINDAPLSGVNRRDGLLISDTSSRGNTSIRRPSSGDDPHVSILSSWDDTPISRSSSRDTPVRGPTIEEDFPIIRSSIKDETVSNGPSSRLDMMHRXXXXXXXXXDDKFTVMELVSSVAGNMPCSSQPISSTQKNTQPEKRTNEHNPTIEKPAVTSPPVFDDVIHVIRHSSFRVGSEQQGMEKAEPDVDVGNFINVVKDELNMRNMTSPVTLKSPSSKSIVSGYGGVKEEDVRNSNSSFAESGSTDXXXXXXXXXXXXLDVKCDRQR 979
            TEESSPTKDLFHFTSVDAKVSLNAPVDLPGAVSEEIYVHKDDSTSSWTISRHDASLIQTSYINDAPLSGVNRRDGLLISDTSSRGNTSIRRPSSGDDPHVSILSSWDDTPISRSSSRDTPVRGPTIEEDFPIIRSSIKDETVSNGPSSRLDMMHRSNLSSASSSDDKFTVMELVSSVAGNMPCSSQPISSTQKNTQPEKRTNEHNPTIEKPAVTSPPVFDDVIHVIRHSSFRVGSEQQGMEKAEPDVDVGNFINVVKDELNMRNMTSPVTLKSPSSKSIVSGYGGVKEEDVRNSNSSFAESGSTDVVKEEETAEKETLDVKCDRQR
Sbjct:  669 TEESSPTKDLFHFTSVDAKVSLNAPVDLPGAVSEEIYVHKDDSTSSWTISRHDASLIQTSYINDAPLSGVNRRDGLLISDTSSRGNTSIRRPSSGDDPHVSILSSWDDTPISRSSSRDTPVRGPTIEEDFPIIRSSIKDETVSNGPSSRLDMMHRSNLSSASSSDDKFTVMELVSSVAGNMPCSSQPISSTQKNTQPEKRTNEHNPTIEKPAVTSPPVFDDVIHVIRHSSFRVGSEQQGMEKAEPDVDVGNFINVVKDELNMRNMTSPVTLKSPSSKSIVSGYGGVKEEDVRNSNSSFAESGSTDVVKEEETAEKETLDVKCDRQR 994          
BLAST of g.arboreum_cottongen_reftransV1_0007630 vs. ExPASy TrEMBL
Match: A0A0D2UIF7_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_009G082900 PE=4 SV=1)

HSP 1 Score: 566.229 bits (1458), Expect = 0.000e+0
Identity = 312/326 (95.71%), Postives = 317/326 (97.24%), Query Frame = 2
Query:    2 TEESSPTKDLFHFTSVDAKVSLNAPVDLPGAVSEEIYVHKDDSTSSWTISRHDASLIQTSYINDAPLSGVNRRDGLLISDTSSRGNTSIRRPSSGDDPHVSILSSWDDTPISRSSSRDTPVRGPTIEEDFPIIRSSIKDETVSNGPSSRLDMMHRXXXXXXXXXDDKFTVMELVSSVAGNMPCSSQPISSTQKNTQPEKRTNEHNPTIEKPAVTSPPVFDDVIHVIRHSSFRVGSEQQGMEKAEPDVDVGNFINVVKDELNMRNMTSPVTLKSPSSKSIVSGYGGVKEEDVRNSNSSFAESGSTDXXXXXXXXXXXXLDVKCDRQR 979
            TEES PTKDLFHF SVDAKVSLNAPVDLPGAVSEE+YVHKDDSTSSWTISRHDASLIQTSYINDAPLSGVNRRDGLLISDTSSRGNTSIRRPSSGDDP +SILSSW+DTPISRSSSRDTPVRGPTIEEDFPIIRSSIKDETVSNGPSSRLDMMH SNLSSASSSDDKFTVMELVSSVAGNMPCSSQPISSTQKNTQPEKRTNEHNPTIEKPAVTSPPVFDDVIHVIRHSSFRVGSEQ GMEKAEP VDVGNFINVVKDELNMRNMTSPVTLKSPSSKSIVSGY GVKEED+RNSNSS  ESGST+VVKEEETAEKETLDVKCDRQR
Sbjct:  371 TEESGPTKDLFHFNSVDAKVSLNAPVDLPGAVSEEMYVHKDDSTSSWTISRHDASLIQTSYINDAPLSGVNRRDGLLISDTSSRGNTSIRRPSSGDDPPISILSSWNDTPISRSSSRDTPVRGPTIEEDFPIIRSSIKDETVSNGPSSRLDMMHHSNLSSASSSDDKFTVMELVSSVAGNMPCSSQPISSTQKNTQPEKRTNEHNPTIEKPAVTSPPVFDDVIHVIRHSSFRVGSEQPGMEKAEPGVDVGNFINVVKDELNMRNMTSPVTLKSPSSKSIVSGYDGVKEEDIRNSNSSSLESGSTEVVKEEETAEKETLDVKCDRQR 696          
BLAST of g.arboreum_cottongen_reftransV1_0007630 vs. ExPASy TrEMBL
Match: A0A0D2RWJ5_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_009G082900 PE=4 SV=1)

HSP 1 Score: 566.229 bits (1458), Expect = 0.000e+0
Identity = 312/326 (95.71%), Postives = 317/326 (97.24%), Query Frame = 2
Query:    2 TEESSPTKDLFHFTSVDAKVSLNAPVDLPGAVSEEIYVHKDDSTSSWTISRHDASLIQTSYINDAPLSGVNRRDGLLISDTSSRGNTSIRRPSSGDDPHVSILSSWDDTPISRSSSRDTPVRGPTIEEDFPIIRSSIKDETVSNGPSSRLDMMHRXXXXXXXXXDDKFTVMELVSSVAGNMPCSSQPISSTQKNTQPEKRTNEHNPTIEKPAVTSPPVFDDVIHVIRHSSFRVGSEQQGMEKAEPDVDVGNFINVVKDELNMRNMTSPVTLKSPSSKSIVSGYGGVKEEDVRNSNSSFAESGSTDXXXXXXXXXXXXLDVKCDRQR 979
            TEES PTKDLFHF SVDAKVSLNAPVDLPGAVSEE+YVHKDDSTSSWTISRHDASLIQTSYINDAPLSGVNRRDGLLISDTSSRGNTSIRRPSSGDDP +SILSSW+DTPISRSSSRDTPVRGPTIEEDFPIIRSSIKDETVSNGPSSRLDMMH SNLSSASSSDDKFTVMELVSSVAGNMPCSSQPISSTQKNTQPEKRTNEHNPTIEKPAVTSPPVFDDVIHVIRHSSFRVGSEQ GMEKAEP VDVGNFINVVKDELNMRNMTSPVTLKSPSSKSIVSGY GVKEED+RNSNSS  ESGST+VVKEEETAEKETLDVKCDRQR
Sbjct:  473 TEESGPTKDLFHFNSVDAKVSLNAPVDLPGAVSEEMYVHKDDSTSSWTISRHDASLIQTSYINDAPLSGVNRRDGLLISDTSSRGNTSIRRPSSGDDPPISILSSWNDTPISRSSSRDTPVRGPTIEEDFPIIRSSIKDETVSNGPSSRLDMMHHSNLSSASSSDDKFTVMELVSSVAGNMPCSSQPISSTQKNTQPEKRTNEHNPTIEKPAVTSPPVFDDVIHVIRHSSFRVGSEQPGMEKAEPGVDVGNFINVVKDELNMRNMTSPVTLKSPSSKSIVSGYDGVKEEDIRNSNSSSLESGSTEVVKEEETAEKETLDVKCDRQR 798          
BLAST of g.arboreum_cottongen_reftransV1_0007630 vs. ExPASy TrEMBL
Match: A0A0D2TG11_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_009G082900 PE=4 SV=1)

HSP 1 Score: 565.844 bits (1457), Expect = 0.000e+0
Identity = 312/326 (95.71%), Postives = 317/326 (97.24%), Query Frame = 2
Query:    2 TEESSPTKDLFHFTSVDAKVSLNAPVDLPGAVSEEIYVHKDDSTSSWTISRHDASLIQTSYINDAPLSGVNRRDGLLISDTSSRGNTSIRRPSSGDDPHVSILSSWDDTPISRSSSRDTPVRGPTIEEDFPIIRSSIKDETVSNGPSSRLDMMHRXXXXXXXXXDDKFTVMELVSSVAGNMPCSSQPISSTQKNTQPEKRTNEHNPTIEKPAVTSPPVFDDVIHVIRHSSFRVGSEQQGMEKAEPDVDVGNFINVVKDELNMRNMTSPVTLKSPSSKSIVSGYGGVKEEDVRNSNSSFAESGSTDXXXXXXXXXXXXLDVKCDRQR 979
            TEES PTKDLFHF SVDAKVSLNAPVDLPGAVSEE+YVHKDDSTSSWTISRHDASLIQTSYINDAPLSGVNRRDGLLISDTSSRGNTSIRRPSSGDDP +SILSSW+DTPISRSSSRDTPVRGPTIEEDFPIIRSSIKDETVSNGPSSRLDMMH SNLSSASSSDDKFTVMELVSSVAGNMPCSSQPISSTQKNTQPEKRTNEHNPTIEKPAVTSPPVFDDVIHVIRHSSFRVGSEQ GMEKAEP VDVGNFINVVKDELNMRNMTSPVTLKSPSSKSIVSGY GVKEED+RNSNSS  ESGST+VVKEEETAEKETLDVKCDRQR
Sbjct:  458 TEESGPTKDLFHFNSVDAKVSLNAPVDLPGAVSEEMYVHKDDSTSSWTISRHDASLIQTSYINDAPLSGVNRRDGLLISDTSSRGNTSIRRPSSGDDPPISILSSWNDTPISRSSSRDTPVRGPTIEEDFPIIRSSIKDETVSNGPSSRLDMMHHSNLSSASSSDDKFTVMELVSSVAGNMPCSSQPISSTQKNTQPEKRTNEHNPTIEKPAVTSPPVFDDVIHVIRHSSFRVGSEQPGMEKAEPGVDVGNFINVVKDELNMRNMTSPVTLKSPSSKSIVSGYDGVKEEDIRNSNSSSLESGSTEVVKEEETAEKETLDVKCDRQR 783          
BLAST of g.arboreum_cottongen_reftransV1_0007630 vs. ExPASy TrEMBL
Match: A0A0D2UIF5_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_009G082900 PE=4 SV=1)

HSP 1 Score: 565.459 bits (1456), Expect = 0.000e+0
Identity = 312/326 (95.71%), Postives = 317/326 (97.24%), Query Frame = 2
Query:    2 TEESSPTKDLFHFTSVDAKVSLNAPVDLPGAVSEEIYVHKDDSTSSWTISRHDASLIQTSYINDAPLSGVNRRDGLLISDTSSRGNTSIRRPSSGDDPHVSILSSWDDTPISRSSSRDTPVRGPTIEEDFPIIRSSIKDETVSNGPSSRLDMMHRXXXXXXXXXDDKFTVMELVSSVAGNMPCSSQPISSTQKNTQPEKRTNEHNPTIEKPAVTSPPVFDDVIHVIRHSSFRVGSEQQGMEKAEPDVDVGNFINVVKDELNMRNMTSPVTLKSPSSKSIVSGYGGVKEEDVRNSNSSFAESGSTDXXXXXXXXXXXXLDVKCDRQR 979
            TEES PTKDLFHF SVDAKVSLNAPVDLPGAVSEE+YVHKDDSTSSWTISRHDASLIQTSYINDAPLSGVNRRDGLLISDTSSRGNTSIRRPSSGDDP +SILSSW+DTPISRSSSRDTPVRGPTIEEDFPIIRSSIKDETVSNGPSSRLDMMH SNLSSASSSDDKFTVMELVSSVAGNMPCSSQPISSTQKNTQPEKRTNEHNPTIEKPAVTSPPVFDDVIHVIRHSSFRVGSEQ GMEKAEP VDVGNFINVVKDELNMRNMTSPVTLKSPSSKSIVSGY GVKEED+RNSNSS  ESGST+VVKEEETAEKETLDVKCDRQR
Sbjct:  669 TEESGPTKDLFHFNSVDAKVSLNAPVDLPGAVSEEMYVHKDDSTSSWTISRHDASLIQTSYINDAPLSGVNRRDGLLISDTSSRGNTSIRRPSSGDDPPISILSSWNDTPISRSSSRDTPVRGPTIEEDFPIIRSSIKDETVSNGPSSRLDMMHHSNLSSASSSDDKFTVMELVSSVAGNMPCSSQPISSTQKNTQPEKRTNEHNPTIEKPAVTSPPVFDDVIHVIRHSSFRVGSEQPGMEKAEPGVDVGNFINVVKDELNMRNMTSPVTLKSPSSKSIVSGYDGVKEEDIRNSNSSSLESGSTEVVKEEETAEKETLDVKCDRQR 994          
BLAST of g.arboreum_cottongen_reftransV1_0007630 vs. ExPASy TrEMBL
Match: A0A0D2QBT3_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_009G082900 PE=4 SV=1)

HSP 1 Score: 565.074 bits (1455), Expect = 0.000e+0
Identity = 312/326 (95.71%), Postives = 317/326 (97.24%), Query Frame = 2
Query:    2 TEESSPTKDLFHFTSVDAKVSLNAPVDLPGAVSEEIYVHKDDSTSSWTISRHDASLIQTSYINDAPLSGVNRRDGLLISDTSSRGNTSIRRPSSGDDPHVSILSSWDDTPISRSSSRDTPVRGPTIEEDFPIIRSSIKDETVSNGPSSRLDMMHRXXXXXXXXXDDKFTVMELVSSVAGNMPCSSQPISSTQKNTQPEKRTNEHNPTIEKPAVTSPPVFDDVIHVIRHSSFRVGSEQQGMEKAEPDVDVGNFINVVKDELNMRNMTSPVTLKSPSSKSIVSGYGGVKEEDVRNSNSSFAESGSTDXXXXXXXXXXXXLDVKCDRQR 979
            TEES PTKDLFHF SVDAKVSLNAPVDLPGAVSEE+YVHKDDSTSSWTISRHDASLIQTSYINDAPLSGVNRRDGLLISDTSSRGNTSIRRPSSGDDP +SILSSW+DTPISRSSSRDTPVRGPTIEEDFPIIRSSIKDETVSNGPSSRLDMMH SNLSSASSSDDKFTVMELVSSVAGNMPCSSQPISSTQKNTQPEKRTNEHNPTIEKPAVTSPPVFDDVIHVIRHSSFRVGSEQ GMEKAEP VDVGNFINVVKDELNMRNMTSPVTLKSPSSKSIVSGY GVKEED+RNSNSS  ESGST+VVKEEETAEKETLDVKCDRQR
Sbjct:  496 TEESGPTKDLFHFNSVDAKVSLNAPVDLPGAVSEEMYVHKDDSTSSWTISRHDASLIQTSYINDAPLSGVNRRDGLLISDTSSRGNTSIRRPSSGDDPPISILSSWNDTPISRSSSRDTPVRGPTIEEDFPIIRSSIKDETVSNGPSSRLDMMHHSNLSSASSSDDKFTVMELVSSVAGNMPCSSQPISSTQKNTQPEKRTNEHNPTIEKPAVTSPPVFDDVIHVIRHSSFRVGSEQPGMEKAEPGVDVGNFINVVKDELNMRNMTSPVTLKSPSSKSIVSGYDGVKEEDIRNSNSSSLESGSTEVVKEEETAEKETLDVKCDRQR 821          
BLAST of g.arboreum_cottongen_reftransV1_0007630 vs. ExPASy TrEMBL
Match: A0A0D2TLT2_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_009G082900 PE=4 SV=1)

HSP 1 Score: 480.715 bits (1236), Expect = 6.695e-158
Identity = 277/326 (84.97%), Postives = 282/326 (86.50%), Query Frame = 2
Query:    2 TEESSPTKDLFHFTSVDAKVSLNAPVDLPGAVSEEIYVHKDDSTSSWTISRHDASLIQTSYINDAPLSGVNRRDGLLISDTSSRGNTSIRRPSSGDDPHVSILSSWDDTPISRSSSRDTPVRGPTIEEDFPIIRSSIKDETVSNGPSSRLDMMHRXXXXXXXXXDDKFTVMELVSSVAGNMPCSSQPISSTQKNTQPEKRTNEHNPTIEKPAVTSPPVFDDVIHVIRHSSFRVGSEQQGMEKAEPDVDVGNFINVVKDELNMRNMTSPVTLKSPSSKSIVSGYGGVKEEDVRNSNSSFAESGSTDXXXXXXXXXXXXLDVKCDRQR 979
            TEES PTKDLFHF SVDAKVSLNAPVDLPGAVSEE+YVHKDDSTSSWTISRHDASLIQTSYINDAPLSGVNRRDGLLISDTSSRGNTSIRRPSSGDDP +SILSSW+DTPISRSSSRDTPVRGPTIEEDFPIIRSSIKDETVSNGPSSRLDMMH SNLSSASSSDDKFTVMELVSSVAGNMPCSSQPISSTQKNTQPEKRTNEHNPTIEKPAVTSPPVFDDVIHVIRHSSFRVGSEQ GMEKAEP                                    GY GVKEED+RNSNSS  ESGST+VVKEEETAEKETLDVKCDRQR
Sbjct:  669 TEESGPTKDLFHFNSVDAKVSLNAPVDLPGAVSEEMYVHKDDSTSSWTISRHDASLIQTSYINDAPLSGVNRRDGLLISDTSSRGNTSIRRPSSGDDPPISILSSWNDTPISRSSSRDTPVRGPTIEEDFPIIRSSIKDETVSNGPSSRLDMMHHSNLSSASSSDDKFTVMELVSSVAGNMPCSSQPISSTQKNTQPEKRTNEHNPTIEKPAVTSPPVFDDVIHVIRHSSFRVGSEQPGMEKAEP------------------------------------GYDGVKEEDIRNSNSSSLESGSTEVVKEEETAEKETLDVKCDRQR 958          
BLAST of g.arboreum_cottongen_reftransV1_0007630 vs. ExPASy TrEMBL
Match: A0A0D2PXZ4_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_001G124800 PE=4 SV=1)

HSP 1 Score: 270.396 bits (690), Expect = 1.444e-78
Identity = 179/305 (58.69%), Postives = 211/305 (69.18%), Query Frame = 2
Query:    2 TEESSPTKDLFHFTSVDAKVSLNAPVDLPGAVSEEIYVHKDDSTSSWT-ISRHDASLIQTSYINDAPLSGVNRRDGLLISDTSSRGNTSIRRPSSGDDPHVSILSSWDDTPISRSS-SRDTPVRGPTIEEDFPIIRSSIKDETVSNGPSSRLDMMHRXXXXXXXXXDDKFTVMELVSSVAGNMPCSSQPISSTQKNTQPEKRTNEHNPTIEKPAVTS-PPVFDDVIHVIRHSSFRVGSEQQGMEKAE---PDVDVGNFINVVKDELNMRNMTSPVTLKSPS------SKSIVSGYGGVKEEDVRN 880
            TEES+PT+DL H TSVDAKVSL+ P+DL G +SEEI V KD ++ S T ISR DA LIQTS  +DAP           I   SSR +  I RPSS D   +S LSS DD  I R S   + P+ GPT  E+  IIRSS KDETV+NGPS R DMM  S++SSASS DDKFTVMEL+SSVA  M C + PISS+QKN+QP++ +N HN T EKPA T  PP F DVIHVIRHSSFRVGSEQ  +EK E    ++DVG  INVV+D+L++ NM+SPVTLKS S      SKS  S + GVKE DVRN
Sbjct:  657 TEESAPTQDLPHSTSVDAKVSLSVPLDLTGMISEEISVPKDHTSVSRTKISRVDAPLIQTSSRDDAP-----------ICSPSSRNDVQISRPSSSDGAPISRLSSSDDASIIRLSIGGNVPLSGPTTGEECSIIRSSAKDETVANGPS-RPDMMLHSHISSASSGDDKFTVMELLSSVAETMHCVALPISSSQKNSQPDEGSNVHNQTTEKPAETCHPPAFGDVIHVIRHSSFRVGSEQPVIEKVEMGAQNMDVGKLINVVRDDLDIGNMSSPVTLKSSSCSEALNSKSNGSDHSGVKEMDVRN 949          
BLAST of g.arboreum_cottongen_reftransV1_0007630 vs. ExPASy TrEMBL
Match: A0A0B0NHM9_GOSAR (Serine/threonine-protein kinase Nek5 OS=Gossypium arboreum GN=F383_11748 PE=4 SV=1)

HSP 1 Score: 267.314 bits (682), Expect = 2.106e-77
Identity = 177/305 (58.03%), Postives = 209/305 (68.52%), Query Frame = 2
Query:    2 TEESSPTKDLFHFTSVDAKVSLNAPVDLPGAVSEEIYVHKDDSTSSWT-ISRHDASLIQTSYINDAPLSGVNRRDGLLISDTSSRGNTSIRRPSSGDDPHVSILSSWDDTPISRSS-SRDTPVRGPTIEEDFPIIRSSIKDETVSNGPSSRLDMMHRXXXXXXXXXDDKFTVMELVSSVAGNMPCSSQPISSTQKNTQPEKRTNEHNPTIEKPAVTS-PPVFDDVIHVIRHSSFRVGSEQQGMEKAE---PDVDVGNFINVVKDELNMRNMTSPVTLKSPS------SKSIVSGYGGVKEEDVRN 880
            TEES+PT+DL H T VDAKVSL+ P+DL G +SEEI   KDD++ S T ISR DA LI+TS  +DA           LI   SSR +  I RPSS D   +S LSS DD  I R S   + P+ GPT  E   IIRSS KDETV+NGPS R DMM  S++SSAS+ DDKFTVMEL+SSVA  M C + PISS+QKN+QP++ +N HN T EKPA T  PP F DVIHVIRHSSFRVGSEQ  +EK E    ++DVG  INVV+DEL++ NM+SPVTLKS S      SKS  S + GVKE DVRN
Sbjct:  657 TEESAPTQDLPHSTLVDAKVSLSVPLDLTGMISEEISFPKDDTSVSRTKISRVDAPLIRTSSWDDA-----------LICSPSSRNDVQISRPSSSDGAPISRLSSSDDASIIRLSIGGNAPLSGPTTGEGCSIIRSSAKDETVANGPS-RPDMMLHSHISSASNGDDKFTVMELLSSVAETMHCVALPISSSQKNSQPDEGSNVHNQTTEKPAETCHPPAFGDVIHVIRHSSFRVGSEQPVIEKVEMGTQNMDVGKLINVVRDELDIGNMSSPVTLKSSSCSEALNSKSNGSDHSGVKEMDVRN 949          
BLAST of g.arboreum_cottongen_reftransV1_0007630 vs. ExPASy TrEMBL
Match: A0A061GUZ8_THECC (ATP binding protein, putative OS=Theobroma cacao GN=TCM_041272 PE=4 SV=1)

HSP 1 Score: 246.899 bits (629), Expect = 3.328e-70
Identity = 182/342 (53.22%), Postives = 216/342 (63.16%), Query Frame = 2
Query:    2 TEESSPTKDLFHFTSVDAKVSLNAPVDLPGAVSEEIYVHKDDSTSSWTISRHDASLIQTSYINDAPLSGVNRRDGLLISDTSSRGNTSIRRPSSGDDPHVSILSSWDDTPISRSSSRDTPVRGPTIEEDFPIIRSSIKDETVSNGPSSRLDMMHRXXXXXXXXXDDKFTVMELVSSVAGNMPCSSQPISSTQKNTQPEKRTNEHNPTIEKPAVTS-PPVFDDVIHVIRHSSFRVGSEQQGMEKAE---PDVDVGNFINVVKDELNMRNMTSPVTLK------SPSSKSIVSGYGGVKEEDVRNSNSSFAESGSTD------XXXXXXXXXXXXLDVKCDRQR 979
            TEES P +DL  FTSVD +VSL+AP+DLP   SE+I VH+DD                T+  +DAP+S    RD   IS  S+R +  I R SSG+D  VS  ++ +D+PISR SS                     KDET+++ PSSR DMM  SNLSSASS DDKFTVMEL+SSVA  MPC + PISS+QKN+QP+K    HNPTIEKPA TS PP FDDVIHVIRHSSFRVGSEQ  +EK E    +VDVG  INVV+DE++MRNMTSPVTLK      + SSKS    Y  VKE D R   S+  +S S +       V EEET+ KETLDVK  RQR
Sbjct:  667 TEESGPAQDLLDFTSVDGRVSLSAPLDLPLPTSEDISVHRDD----------------TADKDDAPISTPTVRDDAPISSLSNRDDAPISRLSSGEDAPVSRPTTGEDSPISRPSS---------------------KDETMASRPSSRPDMMLHSNLSSASSGDDKFTVMELLSSVAEAMPCIASPISSSQKNSQPDKGITLHNPTIEKPAATSRPPAFDDVIHVIRHSSFRVGSEQPVIEKVEMGVQNVDVGKLINVVRDEIDMRNMTSPVTLKSSSCSEALSSKSNALDYSSVKEADDRKPISASPKSDSPEPVKTSPSVTEEETSAKETLDVKSFRQR 971          
BLAST of g.arboreum_cottongen_reftransV1_0007630 vs. ExPASy Swiss-Prot
Match: NEK5_ARATH (Serine/threonine-protein kinase Nek5 OS=Arabidopsis thaliana GN=NEK5 PE=1 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 8.456e-18
Identity = 59/124 (47.58%), Postives = 76/124 (61.29%), Query Frame = 2
Query:  494 DDKFTVMELVSSVAGNMPCSSQPISSTQKNTQPEKRTN--EHNPTIEKPAVTSPP--VFDDVIHVIRHSSFRVGSEQQGMEKAE---PDVDVGNFINVVKDELNMRNMTSPVTLKSPSSKSIVS 844
            DDKFTV E VSSV G  P       S Q N+  + +T+    N  +EK    S P  V DDVIHVIRHSSFRVGS+Q  ME  E    +VD+G  INVV+DE+ +R   +P   +SP+++SI+S
Sbjct:  701 DDKFTVKEFVSSVPGPAPLPLHVEPSHQVNSHSDNKTSVMSQNSALEKNNSHSHPHPVVDDVIHVIRHSSFRVGSDQPVMESVEVGVQNVDMGKLINVVRDEMEVRKGATPS--ESPTTRSIIS 822          
BLAST of g.arboreum_cottongen_reftransV1_0007630 vs. ExPASy Swiss-Prot
Match: NEK5_ORYSJ (Serine/threonine-protein kinase Nek5 OS=Oryza sativa subsp. japonica GN=NEK5 PE=3 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 1.447e-11
Identity = 49/111 (44.14%), Postives = 64/111 (57.66%), Query Frame = 2
Query:  494 DDKFTVMELVSSVAGNMPCSSQPISSTQKNTQP----EKRTNEH-NPTIEKPAVTSPPVFDDVIHVIRHSSFRVGSEQQGMEKAEPDV---DVGNFINVVKDELNMRNMTS 802
            +DKFTV EL+SSVA   P  S    + +K + P    E+ ++ H NP IE           DVIHVIRHSSFRV  EQ   E AE  V   DVG  +NVV++E++ R++ S
Sbjct:  711 EDKFTVQELLSSVADIAPFVSTKNFALEKGSPPIQSLERTSSPHLNPPIE-----------DVIHVIRHSSFRVCGEQAVAENAEMGVQSSDVGKLLNVVREEVDSRSIPS 810          
The following BLAST results are available for this feature:
BLAST of g.arboreum_cottongen_reftransV1_0007630 vs. ExPASy TrEMBL
Analysis Date: 2016-11-15 (Homology Analysis for Gossypium arboreum CottonGen RefTrans V1 vs TrEMBL)
Total hits: 25
Match NameE-valueIdentityDescription
A0A0B0P6D3_GOSAR0.000e+0100.00Serine/threonine-protein kinase Nek5 OS=Gossypium ... [more]
A0A0D2UIF7_GOSRA0.000e+095.71Uncharacterized protein OS=Gossypium raimondii GN=... [more]
A0A0D2RWJ5_GOSRA0.000e+095.71Uncharacterized protein OS=Gossypium raimondii GN=... [more]
A0A0D2TG11_GOSRA0.000e+095.71Uncharacterized protein OS=Gossypium raimondii GN=... [more]
A0A0D2UIF5_GOSRA0.000e+095.71Uncharacterized protein OS=Gossypium raimondii GN=... [more]
A0A0D2QBT3_GOSRA0.000e+095.71Uncharacterized protein OS=Gossypium raimondii GN=... [more]
A0A0D2TLT2_GOSRA6.695e-15884.97Uncharacterized protein OS=Gossypium raimondii GN=... [more]
A0A0D2PXZ4_GOSRA1.444e-7858.69Uncharacterized protein OS=Gossypium raimondii GN=... [more]
A0A0B0NHM9_GOSAR2.106e-7758.03Serine/threonine-protein kinase Nek5 OS=Gossypium ... [more]
A0A061GUZ8_THECC3.328e-7053.22ATP binding protein, putative OS=Theobroma cacao G... [more]

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BLAST of g.arboreum_cottongen_reftransV1_0007630 vs. ExPASy Swiss-Prot
Analysis Date: 2016-11-15 (Homology Analysis for Gossypium arboreum CottonGen RefTrans V1 vs SwissProt)
Total hits: 2
Match NameE-valueIdentityDescription
NEK5_ARATH8.456e-1847.58Serine/threonine-protein kinase Nek5 OS=Arabidopsi... [more]
NEK5_ORYSJ1.447e-1144.14Serine/threonine-protein kinase Nek5 OS=Oryza sati... [more]
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InterPro
Analysis Name: InterProScan analysis for Gossypium arboreum CottonGen RefTrans V1
Date Performed: 2016-11-14
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 287..307

Sequences
The following sequences are available for this feature:

contig sequence

>g.arboreum_cottongen_reftransV1_0007630 ID=g.arboreum_cottongen_reftransV1_0007630; Name=g.arboreum_cottongen_reftransV1_0007630; organism=Gossypium arboreum; type=contig; length=1026bp
AACTGAAGAGTCTAGTCCAACCAAGGATCTTTTTCATTTTACTTCAGTTG
ATGCTAAAGTGAGTCTGAATGCCCCTGTGGACCTTCCAGGCGCGGTTTCA
GAAGAAATATATGTTCATAAAGATGACTCCACTTCAAGCTGGACAATTAG
CAGGCATGATGCTTCATTAATTCAGACAAGTTATATCAACGATGCTCCTT
TAAGCGGAGTAAATAGACGGGATGGTCTCCTTATAAGCGACACAAGTAGT
AGGGGTAACACCTCAATAAGGAGGCCGAGTAGCGGTGATGATCCACATGT
AAGCATATTAAGCAGCTGGGATGATACCCCGATAAGCAGGTCAAGTAGCA
GAGATACCCCTGTAAGGGGGCCAACTATTGAAGAAGATTTCCCCATTATC
AGGTCAAGTATTAAGGACGAAACTGTGTCAAACGGACCTAGTAGCAGACT
TGATATGATGCACCGTTCAAATCTTTCCTCTGCATCCAGCAGCGATGACA
AGTTCACTGTGATGGAACTTGTCTCATCAGTTGCAGGAAATATGCCTTGC
AGTTCCCAACCAATTTCTTCTACCCAAAAGAACACACAGCCAGAGAAAAG
AACAAATGAGCACAACCCAACAATTGAAAAACCAGCAGTGACCTCTCCTC
CGGTTTTCGATGATGTTATACATGTTATAAGGCATAGTAGCTTCCGTGTT
GGCAGTGAGCAACAGGGGATGGAAAAAGCGGAACCGGATGTGGATGTTGG
GAATTTCATAAATGTAGTGAAAGATGAATTGAACATGAGAAACATGACTA
GTCCAGTGACCCTTAAGTCACCAAGTTCAAAATCAATTGTTTCAGGTTAT
GGCGGTGTTAAGGAAGAAGATGTTAGGAACTCCAATTCCTCATTTGCAGA
ATCTGGTTCAACAGACGTGGTGAAGGAAGAGGAGACAGCAGAAAAAGAAA
CATTGGATGTCAAGTGTGATAGGCAAAGGGCAGAGGCACTTGAAGGACTT
CTAGAATTGTCTGCAGAGTTACTACA
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