g.arboreum_cottongen_reftransV1_0006478, g.arboreum_cottongen_reftransV1_0006478 (contig) Gossypium arboreum

Overview


Name	g.arboreum_cottongen_reftransV1_0006478
Unique Name	g.arboreum_cottongen_reftransV1_0006478
Type	contig
Organism	Gossypium arboreum (Tree cotton)
Sequence length	1140

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Chr1	chromosome	g.arboreum_cottongen_reftransV1_0006478:1..1140 . Chr1:70117294..70120339 -

Analyses

This contig is derived from or has results from the following analyses


Analysis Name	Date Performed
Gossypium arboreum CottonGen RefTrans V1	2016-11-14
InterProScan analysis for Gossypium arboreum CottonGen RefTrans V1	2016-11-14
Homology Analysis for Gossypium arboreum CottonGen RefTrans V1 vs TrEMBL	2016-11-15
Homology Analysis for Gossypium arboreum CottonGen RefTrans V1 vs SwissProt	2016-11-15

Homology

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BLAST of g.arboreum_cottongen_reftransV1_0006478 vs. ExPASy TrEMBL
Match: A0A0B0P8Z9_GOSAR (Protein COBRA-like protein OS=Gossypium arboreum GN=F383_26526 PE=4 SV=1)

HSP 1 Score: 624.394 bits (1609), Expect = 0.000e+0
Identity = 320/320 (100.00%), Postives = 320/320 (100.00%), Query Frame = 2

Query:  179 METVFSAASRSISKLIXXXXXXXXXXXXXXXXXXEAYDALDPTGNITIKWDVISWTPDGYVAVVTMYNFQQYRHIQAPGWTLGWTWAKKEVIWSMMGSQTTEQGDCSKYKGNVPHCCKKDPTVVDLLPGTPYNQQIANCCKGGVLNSWVQDPANAASSFQVSVGAAGTTNKTVRVPRNFTLKAPGPGYTCGPAKIVKPTKFITADKRRITQAMMTWNVTCTYSQFLAQKTPTCCVSLSSFYNNTIVNCPTCACGCQNNSTESGSCVSERSSHLASAVLGKSTNAPPLLQCTSHMCPVRIHWHVKLNYKEYWRVKITITNF 1138
            METVFSAASRSISKLISFTALLLFLFSCSTFTSTEAYDALDPTGNITIKWDVISWTPDGYVAVVTMYNFQQYRHIQAPGWTLGWTWAKKEVIWSMMGSQTTEQGDCSKYKGNVPHCCKKDPTVVDLLPGTPYNQQIANCCKGGVLNSWVQDPANAASSFQVSVGAAGTTNKTVRVPRNFTLKAPGPGYTCGPAKIVKPTKFITADKRRITQAMMTWNVTCTYSQFLAQKTPTCCVSLSSFYNNTIVNCPTCACGCQNNSTESGSCVSERSSHLASAVLGKSTNAPPLLQCTSHMCPVRIHWHVKLNYKEYWRVKITITNF
Sbjct:    1 METVFSAASRSISKLISFTALLLFLFSCSTFTSTEAYDALDPTGNITIKWDVISWTPDGYVAVVTMYNFQQYRHIQAPGWTLGWTWAKKEVIWSMMGSQTTEQGDCSKYKGNVPHCCKKDPTVVDLLPGTPYNQQIANCCKGGVLNSWVQDPANAASSFQVSVGAAGTTNKTVRVPRNFTLKAPGPGYTCGPAKIVKPTKFITADKRRITQAMMTWNVTCTYSQFLAQKTPTCCVSLSSFYNNTIVNCPTCACGCQNNSTESGSCVSERSSHLASAVLGKSTNAPPLLQCTSHMCPVRIHWHVKLNYKEYWRVKITITNF 320

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BLAST of g.arboreum_cottongen_reftransV1_0006478 vs. ExPASy TrEMBL
Match: A0A0D2T9A7_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_008G200000 PE=4 SV=1)

HSP 1 Score: 621.313 bits (1601), Expect = 0.000e+0
Identity = 319/320 (99.69%), Postives = 319/320 (99.69%), Query Frame = 2

Query:  179 METVFSAASRSISKLIXXXXXXXXXXXXXXXXXXEAYDALDPTGNITIKWDVISWTPDGYVAVVTMYNFQQYRHIQAPGWTLGWTWAKKEVIWSMMGSQTTEQGDCSKYKGNVPHCCKKDPTVVDLLPGTPYNQQIANCCKGGVLNSWVQDPANAASSFQVSVGAAGTTNKTVRVPRNFTLKAPGPGYTCGPAKIVKPTKFITADKRRITQAMMTWNVTCTYSQFLAQKTPTCCVSLSSFYNNTIVNCPTCACGCQNNSTESGSCVSERSSHLASAVLGKSTNAPPLLQCTSHMCPVRIHWHVKLNYKEYWRVKITITNF 1138
            METVFSAASRSISKLISFTALLLFLFSCSTFTSTEAYDALDPTGNITIKWDVISWTPDGYVAVVTMYNFQQYRHIQAPGWTLGWTWAKKEVIWSMMGSQTTEQGDCSKYKGNVPHCCKKDPTVVDLLPGTPYNQQIANCCKGGVLNSWVQDPANAASSFQVSVGAAGTTNKTVRVPRNFTLKAPGPGYTCGPAKIVKPTKFITADKRRITQAMMTWNVTCTYSQFLAQKTPTCCVSLSSFYNNTIVNCPTCACGCQNNSTESGSCVSERSSHLASAV GKSTNAPPLLQCTSHMCPVRIHWHVKLNYKEYWRVKITITNF
Sbjct:    1 METVFSAASRSISKLISFTALLLFLFSCSTFTSTEAYDALDPTGNITIKWDVISWTPDGYVAVVTMYNFQQYRHIQAPGWTLGWTWAKKEVIWSMMGSQTTEQGDCSKYKGNVPHCCKKDPTVVDLLPGTPYNQQIANCCKGGVLNSWVQDPANAASSFQVSVGAAGTTNKTVRVPRNFTLKAPGPGYTCGPAKIVKPTKFITADKRRITQAMMTWNVTCTYSQFLAQKTPTCCVSLSSFYNNTIVNCPTCACGCQNNSTESGSCVSERSSHLASAVPGKSTNAPPLLQCTSHMCPVRIHWHVKLNYKEYWRVKITITNF 320

[Close]

BLAST of g.arboreum_cottongen_reftransV1_0006478 vs. ExPASy TrEMBL
Match: A0A061FYI8_THECC (COBRA-like extracellular glycosyl-phosphatidyl inositol-anchored protein family isoform 2 OS=Theobroma cacao GN=TCM_014305 PE=4 SV=1)

HSP 1 Score: 573.933 bits (1478), Expect = 0.000e+0
Identity = 293/322 (90.99%), Postives = 310/322 (96.27%), Query Frame = 2

Query:  179 METVFSAASRSISKLIXXXXXXXXXXXXXXXXXXEAYDALDPTGNITIKWDVISWTPDGYVAVVTMYNFQQYRHIQAPGWTLGWTWAKKEVIWSMMGSQTTEQGDCSKYKGNVPHCCKKDPTVVDLLPGTPYNQQIANCCKGGVLNSWVQDPANAASSFQVSVGAAGTTNKTVRVPRNFTLKAPGPGYTCGPAKIVKPTKFITADKRRITQAMMTWNVTCTYSQFLAQKTPTCCVSLSSFYNNTIVNCPTCACGCQNNSTESGSCVSERSSHLASAVL--GKSTNAPPLLQCTSHMCPVRIHWHVKLNYKEYWRVKITITNF 1138
            METV S+AS SISKL SFT +LLFLFSCSTFTSTEAYDALDPTGN+TIKWDVISWTPDGYVAVVT+YNFQQYRHIQAPGWTLGWTWAKKEVIWSMMG+QTTEQGDCSK+KGN+PHCCKKDPTVVDLLPGTPYNQQIANCCKGGV+NSWVQDPANAASSFQVSVGAAGTTNKTVRVPRNFTL+APGPGYTCGPAKIV+PTKF+T DKRRITQAMMTWNVTCTYSQFLAQKTPTCCVSLSSFYN+TIV+CPTCACGCQNN TE GSCVSERS +LASAV   GKS+N+ PLLQCTSHMCPVR+HWHVKLNYKEYWRVKITITNF
Sbjct:    1 METVLSSASGSISKLCSFTIVLLFLFSCSTFTSTEAYDALDPTGNVTIKWDVISWTPDGYVAVVTIYNFQQYRHIQAPGWTLGWTWAKKEVIWSMMGAQTTEQGDCSKFKGNIPHCCKKDPTVVDLLPGTPYNQQIANCCKGGVINSWVQDPANAASSFQVSVGAAGTTNKTVRVPRNFTLRAPGPGYTCGPAKIVRPTKFVTPDKRRITQAMMTWNVTCTYSQFLAQKTPTCCVSLSSFYNDTIVSCPTCACGCQNNITEPGSCVSERSPYLASAVSGPGKSSNS-PLLQCTSHMCPVRVHWHVKLNYKEYWRVKITITNF 321

[Close]

BLAST of g.arboreum_cottongen_reftransV1_0006478 vs. ExPASy TrEMBL
Match: A0A061FZ06_THECC (COBRA-like extracellular glycosyl-phosphatidyl inositol-anchored protein family isoform 1 OS=Theobroma cacao GN=TCM_014305 PE=4 SV=1)

HSP 1 Score: 561.992 bits (1447), Expect = 0.000e+0
Identity = 292/341 (85.63%), Postives = 310/341 (90.91%), Query Frame = 2

Query:  179 METVFSAASRSISKLIXXXXXXXXXXXXXXXXXXEAYDALDPTGNITIKWDVISWTPDGYVAVVTMYNFQQYRHIQAPGWTLGWTWAKKEVIWSMMGSQTTEQGDCSKYKGNVPHCCKKDPTVVDLLPGTPYNQQIANCCKGGVLNSWVQDPANAASSFQVSVGAAGTTNKTVRVPRNFTLKAPGPGYTCGPAKIVKPTKFITADKRRITQAM-------------------MTWNVTCTYSQFLAQKTPTCCVSLSSFYNNTIVNCPTCACGCQNNSTESGSCVSERSSHLASAVL--GKSTNAPPLLQCTSHMCPVRIHWHVKLNYKEYWRVKITITNF 1138
            METV S+AS SISKL SFT +LLFLFSCSTFTSTEAYDALDPTGN+TIKWDVISWTPDGYVAVVT+YNFQQYRHIQAPGWTLGWTWAKKEVIWSMMG+QTTEQGDCSK+KGN+PHCCKKDPTVVDLLPGTPYNQQIANCCKGGV+NSWVQDPANAASSFQVSVGAAGTTNKTVRVPRNFTL+APGPGYTCGPAKIV+PTKF+T DKRRITQAM                   +TWNVTCTYSQFLAQKTPTCCVSLSSFYN+TIV+CPTCACGCQNN TE GSCVSERS +LASAV   GKS+N+ PLLQCTSHMCPVR+HWHVKLNYKEYWRVKITITNF
Sbjct:    1 METVLSSASGSISKLCSFTIVLLFLFSCSTFTSTEAYDALDPTGNVTIKWDVISWTPDGYVAVVTIYNFQQYRHIQAPGWTLGWTWAKKEVIWSMMGAQTTEQGDCSKFKGNIPHCCKKDPTVVDLLPGTPYNQQIANCCKGGVINSWVQDPANAASSFQVSVGAAGTTNKTVRVPRNFTLRAPGPGYTCGPAKIVRPTKFVTPDKRRITQAMSKMVEQSSNFSLSYLHLIAVTWNVTCTYSQFLAQKTPTCCVSLSSFYNDTIVSCPTCACGCQNNITEPGSCVSERSPYLASAVSGPGKSSNS-PLLQCTSHMCPVRVHWHVKLNYKEYWRVKITITNF 340

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BLAST of g.arboreum_cottongen_reftransV1_0006478 vs. ExPASy TrEMBL
Match: D7SIL9_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_17s0000g05070 PE=4 SV=1)

HSP 1 Score: 544.658 bits (1402), Expect = 0.000e+0
Identity = 266/321 (82.87%), Postives = 295/321 (91.90%), Query Frame = 2

Query:  179 METVFSAASRSISKLIXXXXXXXXXXXXXXXXXXEAYDALDPTGNITIKWDVISWTPDGYVAVVTMYNFQQYRHIQAPGWTLGWTWAKKEVIWSMMGSQTTEQGDCSKYKGNVPHCCKKDPTVVDLLPGTPYNQQIANCCKGGVLNSWVQDPANAASSFQVSVGAAGTTNKTVRVPRNFTLKAPGPGYTCGPAKIVKPTKFITADKRRITQAMMTWNVTCTYSQFLAQKTPTCCVSLSSFYNNTIVNCPTCACGCQNNSTESGSCVSERSSHLASAVLGKS-TNAPPLLQCTSHMCPVRIHWHVKLNYKEYWRVKITITNF 1138
            ME  F++ +RSI+KL S+  LL+ LFSCS FTSTEAYD+LDP GNITIKWDV+SWTPDGYVAVVTM+NFQQYRHIQAPGW+LGW+WAKKEVIWSMMG QTTEQGDCS++KGNVPHCCKKDPTVVDLLPGTPYNQQIANCCKGGV+NSWVQDPANAASSFQVSVGAAGTTNKTV++P+NFTL+APGPGYTCGPAKIVKPTKF TAD+RR+TQA+MTWNVTCTYSQFLAQKTPTCCVSLSSFYNNTIV+CPTC CGCQNN T  GSCV   + +LAS V G   T+  PL+QCTSHMCP+R+HWHVKLNYK+YWRVKITITNF
Sbjct:    1 MEFFFTSIARSITKLSSYAILLVLLFSCSIFTSTEAYDSLDPEGNITIKWDVMSWTPDGYVAVVTMFNFQQYRHIQAPGWSLGWSWAKKEVIWSMMGGQTTEQGDCSRFKGNVPHCCKKDPTVVDLLPGTPYNQQIANCCKGGVINSWVQDPANAASSFQVSVGAAGTTNKTVKLPKNFTLRAPGPGYTCGPAKIVKPTKFTTADQRRVTQALMTWNVTCTYSQFLAQKTPTCCVSLSSFYNNTIVSCPTCTCGCQNNLTHPGSCVDPNNPYLASVVEGSGKTSYQPLVQCTSHMCPIRVHWHVKLNYKDYWRVKITITNF 321

[Close]

BLAST of g.arboreum_cottongen_reftransV1_0006478 vs. ExPASy TrEMBL
Match: A0A059A5K9_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_K02540 PE=4 SV=1)

HSP 1 Score: 541.576 bits (1394), Expect = 0.000e+0
Identity = 251/288 (87.15%), Postives = 270/288 (93.75%), Query Frame = 2

Query:  281 EAYDALDPTGNITIKWDVISWTPDGYVAVVTMYNFQQYRHIQAPGWTLGWTWAKKEVIWSMMGSQTTEQGDCSKYKGNVPHCCKKDPTVVDLLPGTPYNQQIANCCKGGVLNSWVQDPANAASSFQVSVGAAGTTNKTVRVPRNFTLKAPGPGYTCGPAKIVKPTKFITADKRRITQAMMTWNVTCTYSQFLAQKTPTCCVSLSSFYNNTIVNCPTCACGCQNNSTESGSCVSERSSHLASAVL--GKSTNAPPLLQCTSHMCPVRIHWHVKLNYKEYWRVKITITNF 1138
            EAYDALDP GNITIKWDVISWTPDGYVAVVTM+NFQQYRHIQ+PGWTLGWTWAKKEVIWSMMGSQTTEQGDCS+YKGN PHCCKKDPTVVDLLPGTPYNQQIANCCKGGVLNSWVQDPANAASSFQVSVGAAGT+NKTVR+P+NFTLKAPGPGYTCGPAKIV+ TKF++ADKRR TQA+MTWNVTCTYSQFLAQKTPTCCVSLSSFYN+TIV CPTC CGCQNN+T++G CV   S HLA  V   GKS++  PL+QCTSHMCP+R+HWHVKLNYKEYWRVKITITNF
Sbjct:   36 EAYDALDPNGNITIKWDVISWTPDGYVAVVTMFNFQQYRHIQSPGWTLGWTWAKKEVIWSMMGSQTTEQGDCSRYKGNTPHCCKKDPTVVDLLPGTPYNQQIANCCKGGVLNSWVQDPANAASSFQVSVGAAGTSNKTVRLPKNFTLKAPGPGYTCGPAKIVRSTKFVSADKRRTTQALMTWNVTCTYSQFLAQKTPTCCVSLSSFYNDTIVRCPTCTCGCQNNATDTGGCVQADSPHLAQVVAGSGKSSSNTPLVQCTSHMCPIRVHWHVKLNYKEYWRVKITITNF 323

[Close]

BLAST of g.arboreum_cottongen_reftransV1_0006478 vs. ExPASy TrEMBL
Match: W9QY89_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_012679 PE=4 SV=1)

HSP 1 Score: 539.265 bits (1388), Expect = 0.000e+0
Identity = 267/313 (85.30%), Postives = 291/313 (92.97%), Query Frame = 2

Query:  206 RSISKLIXXXXXXXXXXXXXXXXXXEAYDALDPTGNITIKWDVISWTPDGYVAVVTMYNFQQYRHIQAPGWTLGWTWAKKEVIWSMMGSQTTEQGDCSKYKGNVPHCCKKDPTVVDLLPGTPYNQQIANCCKGGVLNSWVQDPANAASSFQVSVGAAGTTNKTVRVPRNFTLKAPGPGYTCGPAKIVKPTKFITADKRRITQAMMTWNVTCTYSQFLAQKTPTCCVSLSSFYNNTIVNCPTCACGCQNNSTESGSCVSERSSHLASAV--LGKSTNAPPLLQCTSHMCPVRIHWHVKLNYKEYWRVKITITNF 1138
             SI++L SF   LLFL SC +FTSTEAYDALDPTGNITIKWDV+SWTPDGYVAVVTMYNFQQYRHIQAPGWTLGWTWAKKEVIWSM+G+QTTEQGDCS++KGNVPHCCKKDPTVVDLLPGT YNQQIANCCKGGVLNSWVQDPANAASSFQ+SVGAAGTTNKTV++P+NFTLKAPGPGYTCGPAKIV+ TKFITADKRR+TQA+MTWNVTCTYSQFLAQKTPTCCVSLSSFYN+TIVNCPTC CGC++NST+S SCV+    HLASAV   GKS    PL+QCTSHMCPVRIHWHVK+NYKEYWRVK++ITNF
Sbjct:    2 ESIARLTSFAVSLLFLLSCLSFTSTEAYDALDPTGNITIKWDVMSWTPDGYVAVVTMYNFQQYRHIQAPGWTLGWTWAKKEVIWSMVGAQTTEQGDCSRFKGNVPHCCKKDPTVVDLLPGTAYNQQIANCCKGGVLNSWVQDPANAASSFQISVGAAGTTNKTVKLPKNFTLKAPGPGYTCGPAKIVRATKFITADKRRVTQALMTWNVTCTYSQFLAQKTPTCCVSLSSFYNDTIVNCPTCTCGCKSNSTDSESCVNPNHPHLASAVSGSGKSNINTPLVQCTSHMCPVRIHWHVKINYKEYWRVKVSITNF 314

[Close]

BLAST of g.arboreum_cottongen_reftransV1_0006478 vs. ExPASy TrEMBL
Match: A0A059A4C2_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_K02540 PE=4 SV=1)

HSP 1 Score: 538.88 bits (1387), Expect = 0.000e+0
Identity = 250/287 (87.11%), Postives = 269/287 (93.73%), Query Frame = 2

Query:  284 AYDALDPTGNITIKWDVISWTPDGYVAVVTMYNFQQYRHIQAPGWTLGWTWAKKEVIWSMMGSQTTEQGDCSKYKGNVPHCCKKDPTVVDLLPGTPYNQQIANCCKGGVLNSWVQDPANAASSFQVSVGAAGTTNKTVRVPRNFTLKAPGPGYTCGPAKIVKPTKFITADKRRITQAMMTWNVTCTYSQFLAQKTPTCCVSLSSFYNNTIVNCPTCACGCQNNSTESGSCVSERSSHLASAVL--GKSTNAPPLLQCTSHMCPVRIHWHVKLNYKEYWRVKITITNF 1138
            AYDALDP GNITIKWDVISWTPDGYVAVVTM+NFQQYRHIQ+PGWTLGWTWAKKEVIWSMMGSQTTEQGDCS+YKGN PHCCKKDPTVVDLLPGTPYNQQIANCCKGGVLNSWVQDPANAASSFQVSVGAAGT+NKTVR+P+NFTLKAPGPGYTCGPAKIV+ TKF++ADKRR TQA+MTWNVTCTYSQFLAQKTPTCCVSLSSFYN+TIV CPTC CGCQNN+T++G CV   S HLA  V   GKS++  PL+QCTSHMCP+R+HWHVKLNYKEYWRVKITITNF
Sbjct:   36 AYDALDPNGNITIKWDVISWTPDGYVAVVTMFNFQQYRHIQSPGWTLGWTWAKKEVIWSMMGSQTTEQGDCSRYKGNTPHCCKKDPTVVDLLPGTPYNQQIANCCKGGVLNSWVQDPANAASSFQVSVGAAGTSNKTVRLPKNFTLKAPGPGYTCGPAKIVRSTKFVSADKRRTTQALMTWNVTCTYSQFLAQKTPTCCVSLSSFYNDTIVRCPTCTCGCQNNATDTGGCVQADSPHLAQVVAGSGKSSSNTPLVQCTSHMCPIRVHWHVKLNYKEYWRVKITITNF 322

[Close]

BLAST of g.arboreum_cottongen_reftransV1_0006478 vs. ExPASy TrEMBL
Match: V4K1Q4_EUTSA (Uncharacterized protein OS=Eutrema salsugineum GN=EUTSA_v10004178mg PE=4 SV=1)

HSP 1 Score: 537.724 bits (1384), Expect = 0.000e+0
Identity = 259/323 (80.19%), Postives = 283/323 (87.62%), Query Frame = 2

Query:  179 METVFSAASRSISKLIXXXXXXXXXXXXXXXXXXEAYDALDPTGNITIKWDVISWTPDGYVAVVTMYNFQQYRHIQAPGWTLGWTWAKKEVIWSMMGSQTTEQGDCSKYKGNVPHCCKKDPTVVDLLPGTPYNQQIANCCKGGVLNSWVQDPANAASSFQVSVGAAGTTNKTVRVPRNFTLKAPGPGYTCGPAKIVKPTKFITADKRRITQAMMTWNVTCTYSQFLAQKTPTCCVSLSSFYNNTIVNCPTCACGCQNNSTESGSCVSERSSHLASAV---LGKSTNAPPLLQCTSHMCPVRIHWHVKLNYKEYWRVKITITNF 1138
            ME+ FS ++  + KL      + FL S S+FTSTEAYDALDP GNIT+KWDV+SWTPDGYVAVVTM+NFQ+YRHIQ+PGWTLGW WAKKEVIWSM+G+QTTEQGDCSKYKGN+PHCCKKDPTVVDLLPGTPYNQQIANCCKGGVLNSWVQDP NAASSFQ+SVGAAGTTNKTVRVPRNFTL  PGPGYTCGPAKIVKPTKF+T D RR TQAMMTWN+TCTYSQFLAQ+TPTCCVSLSSFYN TIV CPTCACGCQNN TESG+C+   + HLAS V     K T  PPL+QCT HMCP+R+HWHVK NYKEYWRVKITITNF
Sbjct:    1 MESFFSRSTSIVFKLSFLAVYIFFLISSSSFTSTEAYDALDPEGNITMKWDVMSWTPDGYVAVVTMFNFQKYRHIQSPGWTLGWKWAKKEVIWSMVGAQTTEQGDCSKYKGNIPHCCKKDPTVVDLLPGTPYNQQIANCCKGGVLNSWVQDPGNAASSFQISVGAAGTTNKTVRVPRNFTLMGPGPGYTCGPAKIVKPTKFVTPDTRRTTQAMMTWNITCTYSQFLAQRTPTCCVSLSSFYNETIVGCPTCACGCQNNKTESGACLDPDTPHLASVVSPPTKKGTILPPLVQCTRHMCPIRVHWHVKQNYKEYWRVKITITNF 323

[Close]

BLAST of g.arboreum_cottongen_reftransV1_0006478 vs. ExPASy TrEMBL
Match: R0G9E1_9BRAS (Uncharacterized protein (Fragment) OS=Capsella rubella GN=CARUB_v10026206mg PE=4 SV=1)

HSP 1 Score: 536.569 bits (1381), Expect = 0.000e+0
Identity = 255/323 (78.95%), Postives = 283/323 (87.62%), Query Frame = 2

Query:  179 METVFSAASRSISKLIXXXXXXXXXXXXXXXXXXEAYDALDPTGNITIKWDVISWTPDGYVAVVTMYNFQQYRHIQAPGWTLGWTWAKKEVIWSMMGSQTTEQGDCSKYKGNVPHCCKKDPTVVDLLPGTPYNQQIANCCKGGVLNSWVQDPANAASSFQVSVGAAGTTNKTVRVPRNFTLKAPGPGYTCGPAKIVKPTKFITADKRRITQAMMTWNVTCTYSQFLAQKTPTCCVSLSSFYNNTIVNCPTCACGCQNNSTESGSCVSERSSHLASAV---LGKSTNAPPLLQCTSHMCPVRIHWHVKLNYKEYWRVKITITNF 1138
            ME+ FS ++  ++KL      ++FL S S+FT TEAYDALDP GNIT+KWDV+SWTPDGYVAVVTM+NFQ+YRHIQ+PGWTLGW WAKKEVIWSM+G+QTTEQGDCSKYKGN+PHCCKKDPTVVDLLPGTPYNQQIANCCKGGV+NSWVQDPA AASSFQ+SVGAAGTTNKTVRVPRNFTL  PGPGYTCGPAKIV+PTKF+T D RR TQAMMTWN+TCTYSQFLAQ+TPTCCVSLSSFYN TIV CPTCACGCQNN TESG+C+   + HLAS V     K    PPL+QCT HMCP+R+HWHVK NYKEYWRVKITITNF
Sbjct:   82 MESFFSRSTSVVAKLSFLALWIVFLISSSSFTCTEAYDALDPEGNITMKWDVMSWTPDGYVAVVTMFNFQKYRHIQSPGWTLGWKWAKKEVIWSMVGAQTTEQGDCSKYKGNIPHCCKKDPTVVDLLPGTPYNQQIANCCKGGVMNSWVQDPATAASSFQISVGAAGTTNKTVRVPRNFTLMGPGPGYTCGPAKIVRPTKFVTTDTRRTTQAMMTWNITCTYSQFLAQRTPTCCVSLSSFYNETIVGCPTCACGCQNNRTESGACLDPDTPHLASVVSPPTKKGVILPPLVQCTRHMCPIRVHWHVKQNYKEYWRVKITITNF 404

[Close]

BLAST of g.arboreum_cottongen_reftransV1_0006478 vs. ExPASy Swiss-Prot
Match: COBRA_ARATH (Protein COBRA OS=Arabidopsis thaliana GN=COB PE=2 SV=1)

HSP 1 Score: 536.184 bits (1380), Expect = 0.000e+0
Identity = 258/323 (79.88%), Postives = 285/323 (88.24%), Query Frame = 2

Query:  179 METVFSAASRSISKLIXXXXXXXXXXXXXXXXXXEAYDALDPTGNITIKWDVISWTPDGYVAVVTMYNFQQYRHIQAPGWTLGWTWAKKEVIWSMMGSQTTEQGDCSKYKGNVPHCCKKDPTVVDLLPGTPYNQQIANCCKGGVLNSWVQDPANAASSFQVSVGAAGTTNKTVRVPRNFTLKAPGPGYTCGPAKIVKPTKFITADKRRITQAMMTWNVTCTYSQFLAQKTPTCCVSLSSFYNNTIVNCPTCACGCQNNSTESGSCVSERSSHLASAV---LGKSTNAPPLLQCTSHMCPVRIHWHVKLNYKEYWRVKITITNF 1138
            ME+ FS ++  +SKL      ++FL S S+FTSTEAYDALDP GNIT+KWDV+SWTPDGYVAVVTM+NFQ+YRHIQ+PGWTLGW WAKKEVIWSM+G+QTTEQGDCSKYKGN+PHCCKKDPTVVDLLPGTPYNQQIANCCKGGV+NSWVQDPA AASSFQ+SVGAAGTTNKTVRVPRNFTL  PGPGYTCGPAKIV+PTKF+T D RR TQAMMTWN+TCTYSQFLAQ+TPTCCVSLSSFYN TIV CPTCACGCQNN TESG+C+   + HLAS V     K T  PPL+QCT HMCP+R+HWHVK NYKEYWRVKITITNF
Sbjct:    1 MESFFSRSTSIVSKLSFLALWIVFLISSSSFTSTEAYDALDPEGNITMKWDVMSWTPDGYVAVVTMFNFQKYRHIQSPGWTLGWKWAKKEVIWSMVGAQTTEQGDCSKYKGNIPHCCKKDPTVVDLLPGTPYNQQIANCCKGGVMNSWVQDPATAASSFQISVGAAGTTNKTVRVPRNFTLMGPGPGYTCGPAKIVRPTKFVTTDTRRTTQAMMTWNITCTYSQFLAQRTPTCCVSLSSFYNETIVGCPTCACGCQNNRTESGACLDPDTPHLASVVSPPTKKGTVLPPLVQCTRHMCPIRVHWHVKQNYKEYWRVKITITNF 323

[Close]

BLAST of g.arboreum_cottongen_reftransV1_0006478 vs. ExPASy Swiss-Prot
Match: COBL3_ORYSJ (COBRA-like protein 3 OS=Oryza sativa subsp. japonica GN=BC1L4 PE=2 SV=1)

HSP 1 Score: 507.679 bits (1306), Expect = 8.680e-177
Identity = 241/316 (76.27%), Postives = 271/316 (85.76%), Query Frame = 2

Query:  194 SAASRSISKLIXXXXXXXXXXXXXXXXXXEAYDALDPTGNITIKWDVISWTPDGYVAVVTMYNFQQYRHIQAPGWTLGWTWAKKEVIWSMMGSQTTEQGDCSKYKGNVPHCCKKDPTVVDLLPGTPYNQQIANCCKGGVLNSWVQDPANAASSFQVSVGAAGTTNKTVRVPRNFTLKAPGPGYTCGPAKIVKPTKFITADKRRITQAMMTWNVTCTYSQFLAQKTPTCCVSLSSFYNNTIVNCPTCACGCQNNSTESGSCVSERSSHLASAVLGKST-NAPPLLQCTSHMCPVRIHWHVKLNYKEYWRVKITITNF 1138
            + +SRS++       LL      S   +TEAYDALDP GNITIKWDV+SWTPDGYVAVVTM+N+QQ+RHIQAPGW LGWTWAKKEVIWSM+G+QTTEQGDCSK+KG  PHCCKKDPTVVDLLPGTPYN QIANCCK GV+N++ QDP+NAASSFQ+SVG AGTTNKTV++P+NFTLKAPGPGYTCG A IV+PTKF T D RR TQA+MTWNVTCTYSQFLAQKTP+CCVSLSSFYN+TIVNCPTC+CGCQNN T  GSCV+E S +L SA+ G       PL+QCTSHMCP+RIHWHVKLNYKEYWRVKITITNF
Sbjct:    6 AGSSRSVAPCCCCAVLLAAALLFSAPATTEAYDALDPNGNITIKWDVMSWTPDGYVAVVTMFNYQQFRHIQAPGWQLGWTWAKKEVIWSMVGAQTTEQGDCSKFKGGTPHCCKKDPTVVDLLPGTPYNMQIANCCKAGVINTFNQDPSNAASSFQISVGLAGTTNKTVKLPKNFTLKAPGPGYTCGRAMIVRPTKFFTGDGRRATQALMTWNVTCTYSQFLAQKTPSCCVSLSSFYNDTIVNCPTCSCGCQNNGTSPGSCVNENSPYLQSAIDGPGKWTGQPLVQCTSHMCPIRIHWHVKLNYKEYWRVKITITNF 321

[Close]

BLAST of g.arboreum_cottongen_reftransV1_0006478 vs. ExPASy Swiss-Prot
Match: COBL1_ARATH (COBRA-like protein 1 OS=Arabidopsis thaliana GN=COBL1 PE=2 SV=1)

HSP 1 Score: 491.115 bits (1263), Expect = 1.898e-170
Identity = 224/288 (77.78%), Postives = 256/288 (88.89%), Query Frame = 2

Query:  281 EAYDALDPTGNITIKWDVISWTPDGYVAVVTMYNFQQYRHIQAPGWTLGWTWAKKEVIWSMMGSQTTEQGDCSKYKGNVPHCCKKDPTVVDLLPGTPYNQQIANCCKGGVLNSWVQDPANAASSFQVSVGAAGTTNKTVRVPRNFTLKAPGPGYTCGPAKIVKPTKFITADKRRITQAMMTWNVTCTYSQFLAQKTPTCCVSLSSFYNNTIVNCPTCACGCQNNSTESGSCVSERSSHLASAV--LGKSTNAPPLLQCTSHMCPVRIHWHVKLNYKEYWRVKITITNF 1138
            EAYD LDP+GNIT+KWD+I+WT DGYVA VT+YNFQQYRHIQAPGWTLGW+WAK+EVIW M G QTTEQGDCSK+KG +PHCCKK P+VVDLLPG+PYNQQIANCC+GGVLNSW QDPA A S+FQ++VG AGTTNKTVRVP+NFTLKAPGPGYTC PAKIVKPT+FI  DKRR+TQA+MTWNVTCTYSQFLAQKTPTCCVSLSSFYN TIV+CPTC+CGC+N S + G+CV  +   +AS +   GK+   PPL+QCT HMCPVRIHWHVK+NYK+YWRVK+TITNF
Sbjct:   32 EAYDPLDPSGNITVKWDIITWTGDGYVATVTVYNFQQYRHIQAPGWTLGWSWAKREVIWGMNGGQTTEQGDCSKFKGTIPHCCKKTPSVVDLLPGSPYNQQIANCCRGGVLNSWAQDPATAVSAFQLTVGQAGTTNKTVRVPKNFTLKAPGPGYTCSPAKIVKPTRFIGTDKRRVTQALMTWNVTCTYSQFLAQKTPTCCVSLSSFYNKTIVSCPTCSCGCRNTS-QPGNCVDPKGPRIASVIPNPGKNAYIPPLVQCTKHMCPVRIHWHVKVNYKQYWRVKVTITNF 318

[Close]

BLAST of g.arboreum_cottongen_reftransV1_0006478 vs. ExPASy Swiss-Prot
Match: COBL1_ORYSJ (COBRA-like protein 1 OS=Oryza sativa subsp. japonica GN=BC1L6 PE=2 SV=1)

HSP 1 Score: 486.878 bits (1252), Expect = 8.507e-169
Identity = 222/287 (77.35%), Postives = 252/287 (87.80%), Query Frame = 2

Query:  281 EAYDALDPTGNITIKWDVISWTPDGYVAVVTMYNFQQYRHIQAPGWTLGWTWAKKEVIWSMMGSQTTEQGDCSKYKGNVPHCCKKDPTVVDLLPGTPYNQQIANCCKGGVLNSWVQDPANAASSFQVSVGAAGTTNKTVRVPRNFTLKAPGPGYTCGPAKIVKPTKFITADKRRITQAMMTWNVTCTYSQFLAQKTPTCCVSLSSFYNNTIVNCPTCACGCQNNSTESGSCVSERSSHLASAVLGKSTNA-PPLLQCTSHMCPVRIHWHVKLNYKEYWRVKITITNF 1138
            EAYD LDP GNITIKWDV+ WTPDGYVAVV++YN+QQYRHIQ+PGW LGW WAKKE+IW+M G Q TEQGDCSK+K N+PHCCKKDP +VDLLPGTPYN QIANCCKGGVLNSW QDPANA +SFQVSVG AGTTNKTVRVPRNFTLK+PGPGYTCG AK+V+PTKF + D RR TQA MTWNVTCTYSQ +AQ++PTCCVSLSSFYN+TIVNCPTC+CGCQNN  + GSCV   S +LAS V   + ++  PL+QCTSHMCP+R+HWHVK+NYKEYWRVKIT+TNF
Sbjct:   27 EAYDPLDPNGNITIKWDVLQWTPDGYVAVVSLYNYQQYRHIQSPGWKLGWVWAKKEIIWAMNGGQATEQGDCSKFKSNIPHCCKKDPEIVDLLPGTPYNMQIANCCKGGVLNSWAQDPANAIASFQVSVGQAGTTNKTVRVPRNFTLKSPGPGYTCGSAKVVRPTKFFSQDGRRTTQAHMTWNVTCTYSQIVAQRSPTCCVSLSSFYNDTIVNCPTCSCGCQNN--KPGSCVEGNSPYLASVVNTHNKDSLTPLVQCTSHMCPIRVHWHVKVNYKEYWRVKITVTNF 311

[Close]

BLAST of g.arboreum_cottongen_reftransV1_0006478 vs. ExPASy Swiss-Prot
Match: COBL2_ARATH (COBRA-like protein 2 OS=Arabidopsis thaliana GN=COBL2 PE=1 SV=2)

HSP 1 Score: 474.552 bits (1220), Expect = 4.668e-164
Identity = 214/286 (74.83%), Postives = 254/286 (88.81%), Query Frame = 2

Query:  281 EAYDALDPTGNITIKWDVISWTPDGYVAVVTMYNFQQYRHIQAPGWTLGWTWAKKEVIWSMMGSQTTEQGDCSKYKGNVPHCCKKDPTVVDLLPGTPYNQQIANCCKGGVLNSWVQDPANAASSFQVSVGAAGTTNKTVRVPRNFTLKAPGPGYTCGPAKIVKPTKFITADKRRITQAMMTWNVTCTYSQFLAQKTPTCCVSLSSFYNNTIVNCPTCACGCQNNSTESGSCVSERSSHLASAVLGKSTNAPPLLQCTSHMCPVRIHWHVKLNYKEYWRVKITITNF 1138
            EAYDALDP GNITIKWD++SWT DGYVAVVT++NFQQYRHI+APGW LGW+W KKEVIWSM+G Q TEQGDCSK+KGN+PHCCKK P +VDLLPGTPYNQQI+NCC+GGV+++W QDPA A SSFQ+SVG +GTTN TVR PRN TLKAPGPGYTCGPAK+VKP++FI+ADKRR TQ+++TWN+TCTYSQFLA+KTPTCCVSLS+FYN TIV CPTC+CGCQ NS+++G+CV  + + +  A LGK+ N  PLLQCT HMCP+R+HWHVK +YKEYWRVK+ ITNF
Sbjct:   27 EAYDALDPYGNITIKWDIMSWTGDGYVAVVTIFNFQQYRHIEAPGWQLGWSWMKKEVIWSMVGGQATEQGDCSKFKGNIPHCCKKTPAIVDLLPGTPYNQQISNCCRGGVISAWAQDPATAISSFQISVGQSGTTNTTVRAPRNITLKAPGPGYTCGPAKLVKPSRFISADKRRKTQSLLTWNITCTYSQFLARKTPTCCVSLSAFYNETIVPCPTCSCGCQ-NSSQAGTCVDPKIASVVPA-LGKN-NLEPLLQCTQHMCPIRVHWHVKTSYKEYWRVKVAITNF 309

[Close]

BLAST of g.arboreum_cottongen_reftransV1_0006478 vs. ExPASy Swiss-Prot
Match: COBL2_ORYSJ (COBRA-like protein 2 OS=Oryza sativa subsp. japonica GN=BC1L2 PE=2 SV=1)

HSP 1 Score: 454.136 bits (1167), Expect = 6.853e-156
Identity = 208/288 (72.22%), Postives = 241/288 (83.68%), Query Frame = 2

Query:  281 EAYDALDPTGNITIKWDVISWTPDGYVAVVTMYNFQQYRHIQAPGWTLGWTWAKKEVIWSMMGSQTTEQGDCSKYKGNVPHCCKKDPTVVDLLPGTPYNQQIANCCKGGVLNSWVQDPANAASSFQVSVGAAGTTNKTVRVPRNFTLKAPGPGYTCGPAKIVK-PTKFITADKRRITQAMMTWNVTCTYSQFLAQKTPTCCVSLSSFYNNTIVNCPTCACGCQNNSTESGSCVSERSSHLASAVLGKSTNA-PPLLQCTSHMCPVRIHWHVKLNYKEYWRVKITITNF 1138
            EAYD LDP GNITIKWD+  WTPDGYVAVVT+YNFQ+YRHIQAPGW+LGW WAKKE+IWSM G Q TEQGDCS +K N+PHCCK+DP VVDL+PG PYN Q  NCCKGGVL SWVQDP NA +SFQ++VG +GT+NKTV+ P+NFTLKAPGPGY+CG A+ VK PT+FI+ D RR TQA +TWNVTCTYSQF+AQ+ PTCCVSLSSFYN TIVNCP CACGCQN   + GSCV   S +LAS V G    +  PL+QCT HMCP+R+HWHVKLNY++YWRVK+TITN+
Sbjct:   28 EAYDPLDPNGNITIKWDITQWTPDGYVAVVTIYNFQKYRHIQAPGWSLGWAWAKKEIIWSMAGGQATEQGDCSAFKANIPHCCKRDPRVVDLVPGAPYNMQFGNCCKGGVLTSWVQDPLNAVASFQITVGHSGTSNKTVKAPKNFTLKAPGPGYSCGLAQEVKPPTRFISLDGRRTTQAHVTWNVTCTYSQFVAQRAPTCCVSLSSFYNETIVNCPKCACGCQNK--KPGSCVEGNSPYLASVVNGPGKGSLTPLVQCTPHMCPIRVHWHVKLNYRDYWRVKVTITNW 313

[Close]

BLAST of g.arboreum_cottongen_reftransV1_0006478 vs. ExPASy Swiss-Prot
Match: COBL4_ARATH (COBRA-like protein 4 OS=Arabidopsis thaliana GN=COBL4 PE=2 SV=2)

HSP 1 Score: 448.743 bits (1153), Expect = 4.219e-154
Identity = 213/287 (74.22%), Postives = 235/287 (81.88%), Query Frame = 2

Query:  284 AYDALDPTGNITIKWDVISWTPDGYVAVVTMYNFQQYRHIQAPGWTLGWTWAKKEVIWSMMGSQTTEQGDCSKYKGNVPHCCKKDPTVVDLLPGTPYNQQIANCCKGGVLNSWVQDPANAASSFQVSVGAAGTTNKTVRVPRNFTLKAPGPGYTCGPAKIVKPTKFITADKRRITQAMMTWNVTCTYSQFLAQKTPTCCVSLSSFYNNTIVNCPTCACGCQNNSTESGSCVSERSSHLASAVLG--KSTNAPPLLQCTSHMCPVRIHWHVKLNYKEYWRVKITITNF 1138
            AYD LDP+GNITIKWD++SWT DGYVA VTM NFQ YRHIQ PGWTLGWTWAKKEVIWSM+G+QTTEQGDCSK+KGNVPHCCKK PTVVDLLPG PYNQQ +NCCKGGV+ +W QDP+ A S FQVS G AGTTNKTV++P+NFTL  PGPGYTCGPAKIV  T F+T DKRR TQA+MTWNVTCTYSQFLA+K P+CCVS SSFYN+TI  CP+CACGC+N      SCV   S  L    L   K  N  PLLQCT HMCPVR+HWHVK NYK+YWRVKI ITNF
Sbjct:   20 AYDPLDPSGNITIKWDIMSWTADGYVATVTMNNFQIYRHIQNPGWTLGWTWAKKEVIWSMVGAQTTEQGDCSKFKGNVPHCCKKTPTVVDLLPGVPYNQQFSNCCKGGVIGAWGQDPSAAVSQFQVSAGLAGTTNKTVKLPKNFTLLGPGPGYTCGPAKIVPSTVFLTTDKRRKTQALMTWNVTCTYSQFLARKHPSCCVSFSSFYNDTITPCPSCACGCENKK----SCVKADSKILTKKGLNTPKKDNT-PLLQCTHHMCPVRVHWHVKTNYKDYWRVKIAITNF 301

[Close]

BLAST of g.arboreum_cottongen_reftransV1_0006478 vs. ExPASy Swiss-Prot
Match: COBL6_ORYSJ (COBRA-like protein 6 OS=Oryza sativa subsp. japonica GN=BC1L7 PE=3 SV=1)

HSP 1 Score: 416.387 bits (1069), Expect = 3.909e-141
Identity = 197/302 (65.23%), Postives = 232/302 (76.82%), Query Frame = 2

Query:  284 AYDALDPTGNITIKWDVISWTPDGYVAVVTMYNFQQYRHIQAPGWTLGWTWAKKEVIWSMMGSQTTEQGDCSKYKGNVPHCCKKDPTVVDLLPGTPYNQQIANCCKGGVLNSWVQDPANAASSFQVSVGAAGTTNKTVRVPRNFTLKAPGPGYTCGPAKIVKPTKFITADKRRITQAMMTWNVTCTYSQFLAQKTPTCCVSLSSFYNNTIVNCPTCACGCQNNSTESGSCVSERSSHLASAVLGKSTNA-----------------PPLLQCTSHMCPVRIHWHVKLNYKEYWRVKITITNF 1138
            AYD LDP GNITIKWDV+SWTPDGYVA+VT+ N+Q YR I APGWT+GWTWA++EVIWSM+G+Q T+QGDCS++K N+PHCC++ P VVDLLPG PYNQQIANCC+GGVL ++ Q P+ AA++FQVSVG AGTTN+TVR+PRNFTL  PGPGYTCG A++V  T F+TAD+RR TQA+MTWNVTCTYSQ LA K P+CCVS SSFYN+TIV C  CACGC  +      CV         AV GK  +A                  PLLQCT+HMCPVR+HWHVKLNY+EYWR KITI NF
Sbjct:   21 AYDPLDPNGNITIKWDVMSWTPDGYVAMVTINNYQTYRQIMAPGWTVGWTWARQEVIWSMVGAQATDQGDCSRFKANLPHCCRRTPAVVDLLPGVPYNQQIANCCRGGVLPAYGQAPSAAAAAFQVSVGQAGTTNRTVRLPRNFTLLGPGPGYTCGRARVVPSTVFLTADRRRKTQALMTWNVTCTYSQHLASKYPSCCVSFSSFYNDTIVPCAKCACGCDAHK----PCVRSERDGKRLAVTGKKHDANANAHGRGNGVAAAAMAAPLLQCTTHMCPVRVHWHVKLNYREYWRAKITIVNF 318

[Close]

BLAST of g.arboreum_cottongen_reftransV1_0006478 vs. ExPASy Swiss-Prot
Match: COBL5_ORYSJ (COBRA-like protein 5 OS=Oryza sativa subsp. japonica GN=BC1 PE=2 SV=1)

HSP 1 Score: 411.379 bits (1056), Expect = 5.312e-139
Identity = 196/314 (62.42%), Postives = 232/314 (73.89%), Query Frame = 2

Query:  284 AYDALDPTGNITIKWDVISWTPDGYVAVVTMYNFQQYRHIQAPGWTLGWTWAKKEVIWSMMGSQTTEQGDCSKYKGNVPHCCKKDPTVVDLLPGTPYNQQIANCCKGGVLNSWVQDPANAASSFQVSVGAAGTTNKTVRVPRNFTLKAPGPGYTCGPAKIVKPTKFITADKRRITQAMMTWNVTCTYSQFLAQKTPTCCVSLSSFYNNTIVNCPTCACGCQNN----------STESG------------------SCVSERSSH-LASAVLGKSTNAPPLLQCTSHMCPVRIHWHVKLNYKEYWRVKITITNF 1138
            AYD LDP GNITIKWDVISWTPDGYVA+VTM N+Q YR I APGWT+GW+WAKKEVIWS++G+Q TEQGDCSK+KG +PH CK+ P +VDLLPG PYNQQIANCCK GV++++ QDPA + S+FQVSVG AGTTNKTV++P NFTL  PGPGYTCGPA IV  T ++T D+RR TQA+MTW VTCTYSQ LA + PTCCVS SSFYN+TIV C  CACGC ++          +  +G                   C+   S   L++ V     +  PLLQCTSHMCP+R+HWHVKLNYK+YWR KI ITNF
Sbjct:   22 AYDPLDPKGNITIKWDVISWTPDGYVAMVTMSNYQMYRQILAPGWTVGWSWAKKEVIWSIVGAQATEQGDCSKFKGGIPHSCKRTPAIVDLLPGVPYNQQIANCCKAGVVSAYGQDPAGSVSAFQVSVGLAGTTNKTVKLPTNFTLAGPGPGYTCGPATIVPSTVYLTPDRRRRTQALMTWTVTCTYSQQLASRYPTCCVSFSSFYNSTIVPCARCACGCGHDGYRGNGGGGKNARAGDGRSRRNSGGGGGHSGGTECIMGDSKRALSAGVNTPRKDGAPLLQCTSHMCPIRVHWHVKLNYKDYWRAKIAITNF 335

[Close]

BLAST of g.arboreum_cottongen_reftransV1_0006478 vs. ExPASy Swiss-Prot
Match: COBL5_ORYSI (COBRA-like protein 5 OS=Oryza sativa subsp. indica GN=BC1 PE=2 SV=1)

HSP 1 Score: 411.379 bits (1056), Expect = 5.312e-139
Identity = 196/314 (62.42%), Postives = 232/314 (73.89%), Query Frame = 2

Query:  284 AYDALDPTGNITIKWDVISWTPDGYVAVVTMYNFQQYRHIQAPGWTLGWTWAKKEVIWSMMGSQTTEQGDCSKYKGNVPHCCKKDPTVVDLLPGTPYNQQIANCCKGGVLNSWVQDPANAASSFQVSVGAAGTTNKTVRVPRNFTLKAPGPGYTCGPAKIVKPTKFITADKRRITQAMMTWNVTCTYSQFLAQKTPTCCVSLSSFYNNTIVNCPTCACGCQNN----------STESG------------------SCVSERSSH-LASAVLGKSTNAPPLLQCTSHMCPVRIHWHVKLNYKEYWRVKITITNF 1138
            AYD LDP GNITIKWDVISWTPDGYVA+VTM N+Q YR I APGWT+GW+WAKKEVIWS++G+Q TEQGDCSK+KG +PH CK+ P +VDLLPG PYNQQIANCCK GV++++ QDPA + S+FQVSVG AGTTNKTV++P NFTL  PGPGYTCGPA IV  T ++T D+RR TQA+MTW VTCTYSQ LA + PTCCVS SSFYN+TIV C  CACGC ++          +  +G                   C+   S   L++ V     +  PLLQCTSHMCP+R+HWHVKLNYK+YWR KI ITNF
Sbjct:   22 AYDPLDPKGNITIKWDVISWTPDGYVAMVTMSNYQMYRQILAPGWTVGWSWAKKEVIWSIVGAQATEQGDCSKFKGGIPHSCKRTPAIVDLLPGVPYNQQIANCCKAGVVSAYGQDPAGSVSAFQVSVGLAGTTNKTVKLPTNFTLAGPGPGYTCGPATIVPSTVYLTPDRRRRTQALMTWTVTCTYSQQLASRYPTCCVSFSSFYNSTIVPCARCACGCGHDGYRGNGGGGKNARAGDGRSRRNSGGGGGHSGGTECIMGDSKRALSAGVNTPRKDGAPLLQCTSHMCPIRVHWHVKLNYKDYWRAKIAITNF 335

The following BLAST results are available for this feature:

BLAST of g.arboreum_cottongen_reftransV1_0006478 vs. ExPASy TrEMBL
BLAST of g.arboreum_cottongen_reftransV1_0006478 vs. ExPASy Swiss-Prot

BLAST of g.arboreum_cottongen_reftransV1_0006478 vs. ExPASy TrEMBL
Analysis Date: 2016-11-15 (Homology Analysis for Gossypium arboreum CottonGen RefTrans V1 vs TrEMBL)
Total hits: 25


Match Name	E-value	Identity	Description
A0A0B0P8Z9_GOSAR	0.000e+0	100.00	Protein COBRA-like protein OS=Gossypium arboreum G...	[more]
A0A0D2T9A7_GOSRA	0.000e+0	99.69	Uncharacterized protein OS=Gossypium raimondii GN=...	[more]
A0A061FYI8_THECC	0.000e+0	90.99	COBRA-like extracellular glycosyl-phosphatidyl ino...	[more]
A0A061FZ06_THECC	0.000e+0	85.63	COBRA-like extracellular glycosyl-phosphatidyl ino...	[more]
D7SIL9_VITVI	0.000e+0	82.87	Putative uncharacterized protein OS=Vitis vinifera...	[more]
A0A059A5K9_EUCGR	0.000e+0	87.15	Uncharacterized protein OS=Eucalyptus grandis GN=E...	[more]
W9QY89_9ROSA	0.000e+0	85.30	Uncharacterized protein OS=Morus notabilis GN=L484...	[more]
A0A059A4C2_EUCGR	0.000e+0	87.11	Uncharacterized protein OS=Eucalyptus grandis GN=E...	[more]
V4K1Q4_EUTSA	0.000e+0	80.19	Uncharacterized protein OS=Eutrema salsugineum GN=...	[more]
R0G9E1_9BRAS	0.000e+0	78.95	Uncharacterized protein (Fragment) OS=Capsella rub...	[more]

Pages

BLAST of g.arboreum_cottongen_reftransV1_0006478 vs. ExPASy Swiss-Prot
Analysis Date: 2016-11-15 (Homology Analysis for Gossypium arboreum CottonGen RefTrans V1 vs SwissProt)
Total hits: 19


Match Name	E-value	Identity	Description
COBRA_ARATH	0.000e+0	79.88	Protein COBRA OS=Arabidopsis thaliana GN=COB PE=2 ...	[more]
COBL3_ORYSJ	8.680e-177	76.27	COBRA-like protein 3 OS=Oryza sativa subsp. japoni...	[more]
COBL1_ARATH	1.898e-170	77.78	COBRA-like protein 1 OS=Arabidopsis thaliana GN=CO...	[more]
COBL1_ORYSJ	8.507e-169	77.35	COBRA-like protein 1 OS=Oryza sativa subsp. japoni...	[more]
COBL2_ARATH	4.668e-164	74.83	COBRA-like protein 2 OS=Arabidopsis thaliana GN=CO...	[more]
COBL2_ORYSJ	6.853e-156	72.22	COBRA-like protein 2 OS=Oryza sativa subsp. japoni...	[more]
COBL4_ARATH	4.219e-154	74.22	COBRA-like protein 4 OS=Arabidopsis thaliana GN=CO...	[more]
COBL6_ORYSJ	3.909e-141	65.23	COBRA-like protein 6 OS=Oryza sativa subsp. japoni...	[more]
COBL5_ORYSJ	5.312e-139	62.42	COBRA-like protein 5 OS=Oryza sativa subsp. japoni...	[more]
COBL5_ORYSI	5.312e-139	62.42	COBRA-like protein 5 OS=Oryza sativa subsp. indica...	[more]

Pages

InterPro

Analysis Name: InterProScan analysis for Gossypium arboreum CottonGen RefTrans V1
Date Performed: 2016-11-14


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006918	COBRA, plant	PIRSF	PIRSF038122	COBRA	coord: 8..320 e-value: 1.1E-175 score: 581.9
IPR006918	COBRA, plant	PFAM	PF04833	COBRA	coord: 60..223 e-value: 1.4E-73 score: 246.1
IPR006918	COBRA, plant	PRODOM	PD140986		coord: 35..222 e-value: 1.0E-101 score: 947.0
None	No IPR available	PANTHER	PTHR31673	FAMILY NOT NAMED	coord: 1..320
None	No IPR available	PANTHER	PTHR31673:SF3	COBRA-LIKE EXTRACELLULAR GLYCOSYL-PHOSPHATIDYL INOSITOL-ANCHORED FAMILY PROTEIN-RELATED	coord: 1..320
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE	Signal Peptide	coord: 1..34
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_H_REGION	Signal peptide H-region	coord: 15..26
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 35..320
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_C_REGION	Signal peptide C-region	coord: 27..34
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_N_REGION	Signal peptide N-region	coord: 1..14
None	No IPR available	SIGNALP_GRAM_NEGATIVE	SignalP-noTM	SignalP-noTM	coord: 1..36 score: 0.665
None	No IPR available	SIGNALP_GRAM_POSITIVE	SignalP-TM	SignalP-TM	coord: 1..36 score: 0.477
None	No IPR available	SIGNALP_EUK	SignalP-noTM	SignalP-noTM	coord: 1..36 score: 0.771

Sequences

The following sequences are available for this feature:

contig sequence

contig sequence

>g.arboreum_cottongen_reftransV1_0006478 ID=g.arboreum_cottongen_reftransV1_0006478; Name=g.arboreum_cottongen_reftransV1_0006478; organism=Gossypium arboreum; type=contig; length=1140bp
GGAGCATGTACCTCTCTGTCTCAGACTCTGTACTAAAATGCTTTTATAAG
CTTCACTTGCAACTCAACAGCTGACCTCTATCTTCTCCATTTGATGCGAG
AAGGATCTTTCTTTCTTTATTCTGCACATCTTAACCTTAACCACATCATA
AGATAGAGATCTCTTAAACGATCGAGTTATGGAGACTGTCTTTTCTGCAG
CAAGTAGATCCATTTCCAAGCTCATTAGCTTCACCGCTTTGCTTCTTTTC
TTGTTTTCCTGCTCTACTTTCACTTCTACTGAAGCTTATGATGCGCTTGA
TCCAACTGGAAATATCACTATCAAATGGGACGTAATAAGTTGGACCCCAG
ATGGCTATGTTGCTGTTGTTACAATGTACAATTTCCAACAGTATCGCCAT
ATTCAGGCACCTGGTTGGACATTGGGGTGGACATGGGCCAAAAAGGAAGT
AATCTGGAGCATGATGGGAAGCCAAACCACGGAACAAGGGGATTGTTCAA
AATACAAAGGAAACGTCCCTCATTGCTGTAAAAAGGATCCCACAGTTGTG
GATTTATTGCCTGGAACTCCTTATAACCAGCAGATTGCAAATTGCTGCAA
AGGGGGGGTATTAAATTCATGGGTTCAAGACCCGGCCAATGCAGCAAGCT
CATTTCAGGTTAGTGTGGGCGCTGCAGGAACGACGAACAAAACTGTGAGA
GTGCCTAGAAACTTTACCCTGAAAGCACCAGGTCCAGGATATACTTGTGG
GCCTGCCAAGATTGTGAAACCCACTAAATTCATAACGGCTGATAAAAGGA
GAATAACTCAAGCTATGATGACATGGAATGTTACATGCACATATTCCCAA
TTCCTGGCTCAAAAGACTCCTACATGTTGCGTCTCGCTCTCTTCCTTCTA
TAATAACACTATCGTGAATTGCCCGACATGTGCTTGTGGCTGTCAGAATA
ACTCAACTGAATCTGGGAGTTGTGTAAGCGAAAGGTCTTCACATTTAGCT
TCAGCTGTTCTGGGCAAATCTACCAATGCACCACCTTTGCTTCAGTGTAC
GAGCCATATGTGTCCAGTTCGAATTCACTGGCATGTTAAGCTCAACTACA
AGGAATACTGGCGTGTGAAGATCACGATCACCAATTTCAA

Annotated Terms

The following terms have been associated with this contig:

Vocabulary: **INTERPRO**
Term	Definition
IPR006918	COBRA_pln

Vocabulary: **Cellular Component**
Term	Definition
GO:0031225	obsolete anchored component of membrane

Vocabulary: **Biological Process**
Term	Definition
GO:0010215	cellulose microfibril organization
GO:0016049	cell growth

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g.arboreum_cottongen_reftransV1_0006478, g.arboreum_cottongen_reftransV1_0006478 (contig) Gossypium arboreum

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