g.arboreum_cottongen_reftransV1_0020515, g.arboreum_cottongen_reftransV1_0020515 (contig) Gossypium arboreum

Overview
Nameg.arboreum_cottongen_reftransV1_0020515
Unique Nameg.arboreum_cottongen_reftransV1_0020515
Typecontig
OrganismGossypium arboreum (Tree cotton)
Sequence length2068
Alignments
The following features are aligned
Feature Name Type LocationAnalysisReference
Chr13chromosomeg.arboreum_cottongen_reftransV1_0020515:1..2068 .
Chr13:48874253..48877205 +		n/a
Homology
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BLAST of g.arboreum_cottongen_reftransV1_0020515 vs. ExPASy TrEMBL
Match: A0A0B0MNT4_GOSAR (Homeobox protein knotted-1-like 3 OS=Gossypium arboreum GN=F383_19893 PE=4 SV=1)

HSP 1 Score: 722.235 bits (1863), Expect = 0.000e+0
Identity = 440/440 (100.00%), Postives = 440/440 (100.00%), Query Frame = -3 
Query:  444 MAFHHNNHLSDHHQDLPLHHLTEHHHQQASQLSETNGPNWLNTALLRXXXXXXXXXXXXQFAEPNFLNLHTTRAASDSTTGSQAPNQWLSRTSSSLLHRNHSDVIDDVXXXXXXXXXXXXESMVAMEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVNWQNARYKADILAHPLCEQLLSAHVACLRVATPVDQLPRIDAQLAQSQHVVAKYSSLSGGSQGVVADDKELDQFLTHYVLLLCSFKEQLQQHVRVHAMEAVMACWEIEQSLQSLTGVSPGEGTGATMXXXXXXXXXXDGNLFDGSLEGPDSMGFGPLILTDSEKSLMERVRHELKHELKQGYKEKIVDIREEILRKRRAGKLPGDTTSVLKAWWQSHSKWPYPTEEDKARLVQETGLQLKQINNWFINQRKRNWNSNPXXXXXXXXXXXSNAGENNGDRFM 1763
            MAFHHNNHLSDHHQDLPLHHLTEHHHQQASQLSETNGPNWLNTALLRSQQPQPAQPHSSQFAEPNFLNLHTTRAASDSTTGSQAPNQWLSRTSSSLLHRNHSDVIDDVGAAGEAARGGGGESMVAMESGGSGNNNGIMNNNKSEGVVVESGGGGGDGVVNWQNARYKADILAHPLCEQLLSAHVACLRVATPVDQLPRIDAQLAQSQHVVAKYSSLSGGSQGVVADDKELDQFLTHYVLLLCSFKEQLQQHVRVHAMEAVMACWEIEQSLQSLTGVSPGEGTGATMSDDDDDQVDSDGNLFDGSLEGPDSMGFGPLILTDSEKSLMERVRHELKHELKQGYKEKIVDIREEILRKRRAGKLPGDTTSVLKAWWQSHSKWPYPTEEDKARLVQETGLQLKQINNWFINQRKRNWNSNPSTSTVSKSKRKSNAGENNGDRFM
Sbjct:    1 MAFHHNNHLSDHHQDLPLHHLTEHHHQQASQLSETNGPNWLNTALLRSQQPQPAQPHSSQFAEPNFLNLHTTRAASDSTTGSQAPNQWLSRTSSSLLHRNHSDVIDDVGAAGEAARGGGGESMVAMESGGSGNNNGIMNNNKSEGVVVESGGGGGDGVVNWQNARYKADILAHPLCEQLLSAHVACLRVATPVDQLPRIDAQLAQSQHVVAKYSSLSGGSQGVVADDKELDQFLTHYVLLLCSFKEQLQQHVRVHAMEAVMACWEIEQSLQSLTGVSPGEGTGATMSDDDDDQVDSDGNLFDGSLEGPDSMGFGPLILTDSEKSLMERVRHELKHELKQGYKEKIVDIREEILRKRRAGKLPGDTTSVLKAWWQSHSKWPYPTEEDKARLVQETGLQLKQINNWFINQRKRNWNSNPSTSTVSKSKRKSNAGENNGDRFM 440
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BLAST of g.arboreum_cottongen_reftransV1_0020515 vs. ExPASy TrEMBL
Match: A0A0D2W871_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_013G213900 PE=4 SV=1)

HSP 1 Score: 719.153 bits (1855), Expect = 0.000e+0
Identity = 437/440 (99.32%), Postives = 438/440 (99.55%), Query Frame = -3 
Query:  444 MAFHHNNHLSDHHQDLPLHHLTEHHHQQASQLSETNGPNWLNTALLRXXXXXXXXXXXXQFAEPNFLNLHTTRAASDSTTGSQAPNQWLSRTSSSLLHRNHSDVIDDVXXXXXXXXXXXXESMVAMEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVNWQNARYKADILAHPLCEQLLSAHVACLRVATPVDQLPRIDAQLAQSQHVVAKYSSLSGGSQGVVADDKELDQFLTHYVLLLCSFKEQLQQHVRVHAMEAVMACWEIEQSLQSLTGVSPGEGTGATMXXXXXXXXXXDGNLFDGSLEGPDSMGFGPLILTDSEKSLMERVRHELKHELKQGYKEKIVDIREEILRKRRAGKLPGDTTSVLKAWWQSHSKWPYPTEEDKARLVQETGLQLKQINNWFINQRKRNWNSNPXXXXXXXXXXXSNAGENNGDRFM 1763
            MAFHHNNHLSDHHQDLPLHHLTEHHHQQASQLSETNGPNWLNTALLRSQQPQPAQPHSSQF+EPNFLNLHTTRAASDSTTGSQAPNQWLSRTSSSLLHRNHSDVIDDVGAA EAARGGGGESMVAMESGGSGNNNGIMNNNKSEGVVVESGGGGGDGVVNWQNARYKADILAHPLCEQLLSAHVACLRVATPVDQLPRIDAQLAQSQHVVAKYSSLSGGSQGVVADDKELDQFLTHYVLLLCSFKEQLQQHVRVHAMEAVMACWEIEQSLQSLTGVSPGEGTGATMSDDDDDQVDSD NLFDGSLEGPDSMGFGPLILTDSEKSLMERVRHELKHELKQGYKEKIVDIREEILRKRRAGKLPGDTTSVLKAWWQSHSKWPYPTEEDKARLVQETGLQLKQINNWFINQRKRNWNSNPSTSTVSKSKRKSNAGENNGDRFM
Sbjct:    1 MAFHHNNHLSDHHQDLPLHHLTEHHHQQASQLSETNGPNWLNTALLRSQQPQPAQPHSSQFSEPNFLNLHTTRAASDSTTGSQAPNQWLSRTSSSLLHRNHSDVIDDVGAAAEAARGGGGESMVAMESGGSGNNNGIMNNNKSEGVVVESGGGGGDGVVNWQNARYKADILAHPLCEQLLSAHVACLRVATPVDQLPRIDAQLAQSQHVVAKYSSLSGGSQGVVADDKELDQFLTHYVLLLCSFKEQLQQHVRVHAMEAVMACWEIEQSLQSLTGVSPGEGTGATMSDDDDDQVDSDANLFDGSLEGPDSMGFGPLILTDSEKSLMERVRHELKHELKQGYKEKIVDIREEILRKRRAGKLPGDTTSVLKAWWQSHSKWPYPTEEDKARLVQETGLQLKQINNWFINQRKRNWNSNPSTSTVSKSKRKSNAGENNGDRFM 440
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BLAST of g.arboreum_cottongen_reftransV1_0020515 vs. ExPASy TrEMBL
Match: A0A0D2U4U7_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_013G213900 PE=4 SV=1)

HSP 1 Score: 714.146 bits (1842), Expect = 0.000e+0
Identity = 430/441 (97.51%), Postives = 434/441 (98.41%), Query Frame = -3 
Query:  444 MAFHHNNHLSDHHQDLPLHHLTEHHHQQASQLSETNGPNWLNTALLRXXXXXXXXXXXXQFAEPNFLNLHTTRAASDSTTGSQAPNQWLSRTSSSLLHRNHSDVIDDVXXXXXXXXXXXXESMVAMEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVNWQNARYKADILAHPLCEQLLSAHVACLRVATPVDQLPRIDAQLAQSQHVVAKYSSLSGGSQGVVADDKELDQFLTHYVLLLCSFKEQLQQHVRVHAMEAVMACWEIEQSLQSLTGVSPGEGTGATMXXXXXXXXXXDGNLFDGSLEGPDSMGFGPLILTDSEKSLMERVRHELKHELKQGYKEKIVDIREEILRKRRAGKLPGDTTSVLKAWWQSHSKWPYPTEEDKARLVQETGLQLKQINNWFINQRKRNWNSNPXXXX-XXXXXXXSNAGENNGDRFM 1763
            MAFHHNNHLSDHHQDLPLHHLTEHHHQQASQLSETNGPNWLNTALLRSQQPQPAQPHSSQF+EPNFLNLHTTRAASDSTTGSQAPNQWLSRTSSSLLHRNHSDVIDDVGAA EAARGGGGESMVAMESGGSGNNNGIMNNNKSEGVVVESGGGGGDGVVNWQNARYKADILAHPLCEQLLSAHVACLRVATPVDQLPRIDAQLAQSQHVVAKYSSLSGGSQGVVADDKELDQFLTHYVLLLCSFKEQLQQHVRVHAMEAVMACWEIEQSLQSLTGVSPGEGTGATMSDDDDDQVDSD NLFDGSLEGPDSMGFGPLILTDSEKSLMERVRHELKHELKQGYKEKIVDIREEILRKRRAGKLPGDTTSVLKAWWQSHSKWPYPTEEDKARLVQETGLQLKQINNWFINQRKRNWNSNPSTST     +++SNAGENNGDRFM
Sbjct:    1 MAFHHNNHLSDHHQDLPLHHLTEHHHQQASQLSETNGPNWLNTALLRSQQPQPAQPHSSQFSEPNFLNLHTTRAASDSTTGSQAPNQWLSRTSSSLLHRNHSDVIDDVGAAAEAARGGGGESMVAMESGGSGNNNGIMNNNKSEGVVVESGGGGGDGVVNWQNARYKADILAHPLCEQLLSAHVACLRVATPVDQLPRIDAQLAQSQHVVAKYSSLSGGSQGVVADDKELDQFLTHYVLLLCSFKEQLQQHVRVHAMEAVMACWEIEQSLQSLTGVSPGEGTGATMSDDDDDQVDSDANLFDGSLEGPDSMGFGPLILTDSEKSLMERVRHELKHELKQGYKEKIVDIREEILRKRRAGKLPGDTTSVLKAWWQSHSKWPYPTEEDKARLVQETGLQLKQINNWFINQRKRNWNSNPSTSTVSKSKRKRSNAGENNGDRFM 441
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BLAST of g.arboreum_cottongen_reftransV1_0020515 vs. ExPASy TrEMBL
Match: A0A0D2SHV3_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_013G213900 PE=4 SV=1)

HSP 1 Score: 697.582 bits (1799), Expect = 0.000e+0
Identity = 414/417 (99.28%), Postives = 415/417 (99.52%), Query Frame = -3 
Query:  513 MAFHHNNHLSDHHQDLPLHHLTEHHHQQASQLSETNGPNWLNTALLRXXXXXXXXXXXXQFAEPNFLNLHTTRAASDSTTGSQAPNQWLSRTSSSLLHRNHSDVIDDVXXXXXXXXXXXXESMVAMEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVNWQNARYKADILAHPLCEQLLSAHVACLRVATPVDQLPRIDAQLAQSQHVVAKYSSLSGGSQGVVADDKELDQFLTHYVLLLCSFKEQLQQHVRVHAMEAVMACWEIEQSLQSLTGVSPGEGTGATMXXXXXXXXXXDGNLFDGSLEGPDSMGFGPLILTDSEKSLMERVRHELKHELKQGYKEKIVDIREEILRKRRAGKLPGDTTSVLKAWWQSHSKWPYPTEEDKARLVQETGLQLKQINNWFINQRKRNWNSNP 1763
            MAFHHNNHLSDHHQDLPLHHLTEHHHQQASQLSETNGPNWLNTALLRSQQPQPAQPHSSQF+EPNFLNLHTTRAASDSTTGSQAPNQWLSRTSSSLLHRNHSDVIDDVGAA EAARGGGGESMVAMESGGSGNNNGIMNNNKSEGVVVESGGGGGDGVVNWQNARYKADILAHPLCEQLLSAHVACLRVATPVDQLPRIDAQLAQSQHVVAKYSSLSGGSQGVVADDKELDQFLTHYVLLLCSFKEQLQQHVRVHAMEAVMACWEIEQSLQSLTGVSPGEGTGATMSDDDDDQVDSD NLFDGSLEGPDSMGFGPLILTDSEKSLMERVRHELKHELKQGYKEKIVDIREEILRKRRAGKLPGDTTSVLKAWWQSHSKWPYPTEEDKARLVQETGLQLKQINNWFINQRKRNWNSNP
Sbjct:    1 MAFHHNNHLSDHHQDLPLHHLTEHHHQQASQLSETNGPNWLNTALLRSQQPQPAQPHSSQFSEPNFLNLHTTRAASDSTTGSQAPNQWLSRTSSSLLHRNHSDVIDDVGAAAEAARGGGGESMVAMESGGSGNNNGIMNNNKSEGVVVESGGGGGDGVVNWQNARYKADILAHPLCEQLLSAHVACLRVATPVDQLPRIDAQLAQSQHVVAKYSSLSGGSQGVVADDKELDQFLTHYVLLLCSFKEQLQQHVRVHAMEAVMACWEIEQSLQSLTGVSPGEGTGATMSDDDDDQVDSDANLFDGSLEGPDSMGFGPLILTDSEKSLMERVRHELKHELKQGYKEKIVDIREEILRKRRAGKLPGDTTSVLKAWWQSHSKWPYPTEEDKARLVQETGLQLKQINNWFINQRKRNWNSNP 417
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BLAST of g.arboreum_cottongen_reftransV1_0020515 vs. ExPASy TrEMBL
Match: A0A0D2VGS1_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_013G213900 PE=4 SV=1)

HSP 1 Score: 696.041 bits (1795), Expect = 0.000e+0
Identity = 414/417 (99.28%), Postives = 415/417 (99.52%), Query Frame = -3 
Query:  513 MAFHHNNHLSDHHQDLPLHHLTEHHHQQASQLSETNGPNWLNTALLRXXXXXXXXXXXXQFAEPNFLNLHTTRAASDSTTGSQAPNQWLSRTSSSLLHRNHSDVIDDVXXXXXXXXXXXXESMVAMEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVNWQNARYKADILAHPLCEQLLSAHVACLRVATPVDQLPRIDAQLAQSQHVVAKYSSLSGGSQGVVADDKELDQFLTHYVLLLCSFKEQLQQHVRVHAMEAVMACWEIEQSLQSLTGVSPGEGTGATMXXXXXXXXXXDGNLFDGSLEGPDSMGFGPLILTDSEKSLMERVRHELKHELKQGYKEKIVDIREEILRKRRAGKLPGDTTSVLKAWWQSHSKWPYPTEEDKARLVQETGLQLKQINNWFINQRKRNWNSNP 1763
            MAFHHNNHLSDHHQDLPLHHLTEHHHQQASQLSETNGPNWLNTALLRSQQPQPAQPHSSQF+EPNFLNLHTTRAASDSTTGSQAPNQWLSRTSSSLLHRNHSDVIDDVGAA EAARGGGGESMVAMESGGSGNNNGIMNNNKSEGVVVESGGGGGDGVVNWQNARYKADILAHPLCEQLLSAHVACLRVATPVDQLPRIDAQLAQSQHVVAKYSSLSGGSQGVVADDKELDQFLTHYVLLLCSFKEQLQQHVRVHAMEAVMACWEIEQSLQSLTGVSPGEGTGATMSDDDDDQVDSD NLFDGSLEGPDSMGFGPLILTDSEKSLMERVRHELKHELKQGYKEKIVDIREEILRKRRAGKLPGDTTSVLKAWWQSHSKWPYPTEEDKARLVQETGLQLKQINNWFINQRKRNWNSNP
Sbjct:    1 MAFHHNNHLSDHHQDLPLHHLTEHHHQQASQLSETNGPNWLNTALLRSQQPQPAQPHSSQFSEPNFLNLHTTRAASDSTTGSQAPNQWLSRTSSSLLHRNHSDVIDDVGAAAEAARGGGGESMVAMESGGSGNNNGIMNNNKSEGVVVESGGGGGDGVVNWQNARYKADILAHPLCEQLLSAHVACLRVATPVDQLPRIDAQLAQSQHVVAKYSSLSGGSQGVVADDKELDQFLTHYVLLLCSFKEQLQQHVRVHAMEAVMACWEIEQSLQSLTGVSPGEGTGATMSDDDDDQVDSDANLFDGSLEGPDSMGFGPLILTDSEKSLMERVRHELKHELKQGYKEKIVDIREEILRKRRAGKLPGDTTSVLKAWWQSHSKWPYPTEEDKARLVQETGLQLKQINNWFINQRKRNWNSNP 417
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BLAST of g.arboreum_cottongen_reftransV1_0020515 vs. ExPASy TrEMBL
Match: A0A067E6C7_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g013045mg PE=4 SV=1)

HSP 1 Score: 562.377 bits (1448), Expect = 0.000e+0
Identity = 336/462 (72.73%), Postives = 366/462 (79.22%), Query Frame = -3 
Query:  444 MAFHHNNHLSDHHQDLPLHHLTEHHHQQASQLS--------------ETNGPNWLNTALLRXXXXXXXXXXXXQFAEPNFLNLHTTRAASDS--------TTGSQAPNQWLSRTSSSLLHRNHSDVIDDVXXXXXXXXXXXXESMVAMEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVNWQNARYKADILAHPLCEQLLSAHVACLRVATPVDQLPRIDAQLAQSQHVVAKYSSLSGGSQGVVADDKELDQFLTHYVLLLCSFKEQLQQHVRVHAMEAVMACWEIEQSLQSLTGVSPGEGTGATMXXXXXXXXXXDGNLFDGSLEGPDSMGFGPLILTDSEKSLMERVRHELKHELKQGYKEKIVDIREEILRKRRAGKLPGDTTSVLKAWWQSHSKWPYPTEEDKARLVQETGLQLKQINNWFINQRKRNWNSNPXXXXXXXXXXXSNAGENNGDRFM 1763
            MAFHHN HLS   QDLPLHH T+   QQ  Q                ET  PNWLN+ALLRSQQ Q    H   F++ NFLNL TT   ++S        +  SQ PNQWLSRTSSSLLHRNHSDVIDDV  A ++       + V      + N+  + N + +          G DGVVNWQNARYKA+IL+HPL EQLLSAHVACLR+ATPVDQLPRIDAQLAQSQHVV+KYS+L  G QG+V DDKELDQF+THYVLLLCSFKEQLQQHVRVHAMEAVMACWEIEQSLQSLTGVSPGEGTGATMSDDD+DQVDSD NLFDGSLEGPD+MGFGPLI T+SE+SLMERVR ELKHELKQGYKEKIVDIREEILRKRRAGKLPGDTTSVLK+WWQSHSKWPYPTEEDKARLVQETGLQLKQINNWFINQRKRNW+SNPSTSTV KSKRKSNAGEN+ DR+M
Sbjct:    1 MAFHHN-HLS---QDLPLHHFTDQQQQQQQQPPSPPQQQHHQHQQSIETTAPNWLNSALLRSQQAQQQAAH---FSDTNFLNLRTTANNNNSNNNNTASDSDASQTPNQWLSRTSSSLLHRNHSDVIDDVTPANDSII-----AAVESADLKNANSENMNNASTNNKSEGVVVESGADGVVNWQNARYKAEILSHPLYEQLLSAHVACLRIATPVDQLPRIDAQLAQSQHVVSKYSALGAG-QGLVTDDKELDQFMTHYVLLLCSFKEQLQQHVRVHAMEAVMACWEIEQSLQSLTGVSPGEGTGATMSDDDEDQVDSDANLFDGSLEGPDTMGFGPLIPTESERSLMERVRQELKHELKQGYKEKIVDIREEILRKRRAGKLPGDTTSVLKSWWQSHSKWPYPTEEDKARLVQETGLQLKQINNWFINQRKRNWHSNPSTSTVLKSKRKSNAGENSSDRYM 449
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BLAST of g.arboreum_cottongen_reftransV1_0020515 vs. ExPASy TrEMBL
Match: V4UMG7_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10008269mg PE=4 SV=1)

HSP 1 Score: 562.377 bits (1448), Expect = 0.000e+0
Identity = 336/462 (72.73%), Postives = 366/462 (79.22%), Query Frame = -3 
Query:  444 MAFHHNNHLSDHHQDLPLHHLTEHHHQQASQLS--------------ETNGPNWLNTALLRXXXXXXXXXXXXQFAEPNFLNLHTTRAASDS--------TTGSQAPNQWLSRTSSSLLHRNHSDVIDDVXXXXXXXXXXXXESMVAMEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVNWQNARYKADILAHPLCEQLLSAHVACLRVATPVDQLPRIDAQLAQSQHVVAKYSSLSGGSQGVVADDKELDQFLTHYVLLLCSFKEQLQQHVRVHAMEAVMACWEIEQSLQSLTGVSPGEGTGATMXXXXXXXXXXDGNLFDGSLEGPDSMGFGPLILTDSEKSLMERVRHELKHELKQGYKEKIVDIREEILRKRRAGKLPGDTTSVLKAWWQSHSKWPYPTEEDKARLVQETGLQLKQINNWFINQRKRNWNSNPXXXXXXXXXXXSNAGENNGDRFM 1763
            MAFHHN HLS   QDLPLHH T+   QQ  Q                ET  PNWLN+ALLRSQQ Q    H   F++ NFLNL TT   ++S        +  SQ PNQWLSRTSSSLLHRNHSDVIDDV  A ++       + V      + N+  + N + +          G DGVVNWQNARYKA+IL+HPL EQLLSAHVACLR+ATPVDQLPRIDAQLAQSQHVV+KYS+L  G QG+V DDKELDQF+THYVLLLCSFKEQLQQHVRVHAMEAVMACWEIEQSLQSLTGVSPGEGTGATMSDDD+DQVDSD NLFDGSLEGPD+MGFGPLI T+SE+SLMERVR ELKHELKQGYKEKIVDIREEILRKRRAGKLPGDTTSVLK+WWQSHSKWPYPTEEDKARLVQETGLQLKQINNWFINQRKRNW+SNPSTSTV KSKRKSNAGEN+ DR+M
Sbjct:    1 MAFHHN-HLS---QDLPLHHFTDQQQQQQQQPPSPPQQQHHQHQQSIETTAPNWLNSALLRSQQAQQQAAH---FSDTNFLNLRTTANNNNSNNNNTASDSDASQTPNQWLSRTSSSLLHRNHSDVIDDVTPANDSII-----AAVESADLKNANSENMNNASTNNKSEGVVVESGADGVVNWQNARYKAEILSHPLYEQLLSAHVACLRIATPVDQLPRIDAQLAQSQHVVSKYSALGAG-QGLVTDDKELDQFMTHYVLLLCSFKEQLQQHVRVHAMEAVMACWEIEQSLQSLTGVSPGEGTGATMSDDDEDQVDSDANLFDGSLEGPDTMGFGPLIPTESERSLMERVRQELKHELKQGYKEKIVDIREEILRKRRAGKLPGDTTSVLKSWWQSHSKWPYPTEEDKARLVQETGLQLKQINNWFINQRKRNWHSNPSTSTVLKSKRKSNAGENSSDRYM 449
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BLAST of g.arboreum_cottongen_reftransV1_0020515 vs. ExPASy TrEMBL
Match: A0A067DVD8_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g013045mg PE=4 SV=1)

HSP 1 Score: 558.14 bits (1437), Expect = 0.000e+0
Identity = 331/463 (71.49%), Postives = 364/463 (78.62%), Query Frame = -3 
Query:  444 MAFHHNNHLSDHHQDLPLHHLTEHHHQQASQLS--------------ETNGPNWLNTALLRXXXXXXXXXXXXQFAEPNFLNLHTTRAASDS--------TTGSQAPNQWLSRTSSSLLHRNHSDVIDDVXXXXXXXXXXXXESMVAMEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVNWQNARYKADILAHPLCEQLLSAHVACLRVATPVDQLPRIDAQLAQSQHVVAKYSSLSGGSQGVVADDKELDQFLTHYVLLLCSFKEQLQQHVRVHAMEAVMACWEIEQSLQSLTGVSPGEGTGATMXXXXXXXXXXDGNLFDGSLEGPDSMGFGPLILTDSEKSLMERVRHELKHELKQGYKEKIVDIREEILRKRRAGKLPGDTTSVLKAWWQSHSKWPYPTEEDKARLVQETGLQLKQINNWFINQRKRNWNSNPXXXXX-XXXXXXSNAGENNGDRFM 1763
            MAFHHN HLS   QDLPLHH T+   QQ  Q                ET  PNWLN+ALLRSQQ Q    H   F++ NFLNL TT   ++S        +  SQ PNQWLSRTSSSLLHRNHSDVIDDV  A ++       + V      + N+  + N + +          G DGVVNWQNARYKA+IL+HPL EQLLSAHVACLR+ATPVDQLPRIDAQLAQSQHVV+KYS+L  G QG+V DDKELDQF+THYVLLLCSFKEQLQQHVRVHAMEAVMACWEIEQSLQSLTGVSPGEGTGATMSDDD+DQVDSD NLFDGSLEGPD+MGFGPLI T+SE+SLMERVR ELKHELKQGYKEKIVDIREEILRKRRAGKLPGDTTSVLK+WWQSHSKWPYPTEEDKARLVQETGLQLKQINNWFINQRKRNW+SNPSTSTV    +++SNAGEN+ DR+M
Sbjct:    1 MAFHHN-HLS---QDLPLHHFTDQQQQQQQQPPSPPQQQHHQHQQSIETTAPNWLNSALLRSQQAQQQAAH---FSDTNFLNLRTTANNNNSNNNNTASDSDASQTPNQWLSRTSSSLLHRNHSDVIDDVTPANDSII-----AAVESADLKNANSENMNNASTNNKSEGVVVESGADGVVNWQNARYKAEILSHPLYEQLLSAHVACLRIATPVDQLPRIDAQLAQSQHVVSKYSALGAG-QGLVTDDKELDQFMTHYVLLLCSFKEQLQQHVRVHAMEAVMACWEIEQSLQSLTGVSPGEGTGATMSDDDEDQVDSDANLFDGSLEGPDTMGFGPLIPTESERSLMERVRQELKHELKQGYKEKIVDIREEILRKRRAGKLPGDTTSVLKSWWQSHSKWPYPTEEDKARLVQETGLQLKQINNWFINQRKRNWHSNPSTSTVLKSKRKRSNAGENSSDRYM 450
[Close]
BLAST of g.arboreum_cottongen_reftransV1_0020515 vs. ExPASy TrEMBL
Match: V4UC09_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10008269mg PE=4 SV=1)

HSP 1 Score: 558.14 bits (1437), Expect = 0.000e+0
Identity = 331/463 (71.49%), Postives = 364/463 (78.62%), Query Frame = -3 
Query:  444 MAFHHNNHLSDHHQDLPLHHLTEHHHQQASQLS--------------ETNGPNWLNTALLRXXXXXXXXXXXXQFAEPNFLNLHTTRAASDS--------TTGSQAPNQWLSRTSSSLLHRNHSDVIDDVXXXXXXXXXXXXESMVAMEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVNWQNARYKADILAHPLCEQLLSAHVACLRVATPVDQLPRIDAQLAQSQHVVAKYSSLSGGSQGVVADDKELDQFLTHYVLLLCSFKEQLQQHVRVHAMEAVMACWEIEQSLQSLTGVSPGEGTGATMXXXXXXXXXXDGNLFDGSLEGPDSMGFGPLILTDSEKSLMERVRHELKHELKQGYKEKIVDIREEILRKRRAGKLPGDTTSVLKAWWQSHSKWPYPTEEDKARLVQETGLQLKQINNWFINQRKRNWNSNPXXXXX-XXXXXXSNAGENNGDRFM 1763
            MAFHHN HLS   QDLPLHH T+   QQ  Q                ET  PNWLN+ALLRSQQ Q    H   F++ NFLNL TT   ++S        +  SQ PNQWLSRTSSSLLHRNHSDVIDDV  A ++       + V      + N+  + N + +          G DGVVNWQNARYKA+IL+HPL EQLLSAHVACLR+ATPVDQLPRIDAQLAQSQHVV+KYS+L  G QG+V DDKELDQF+THYVLLLCSFKEQLQQHVRVHAMEAVMACWEIEQSLQSLTGVSPGEGTGATMSDDD+DQVDSD NLFDGSLEGPD+MGFGPLI T+SE+SLMERVR ELKHELKQGYKEKIVDIREEILRKRRAGKLPGDTTSVLK+WWQSHSKWPYPTEEDKARLVQETGLQLKQINNWFINQRKRNW+SNPSTSTV    +++SNAGEN+ DR+M
Sbjct:    1 MAFHHN-HLS---QDLPLHHFTDQQQQQQQQPPSPPQQQHHQHQQSIETTAPNWLNSALLRSQQAQQQAAH---FSDTNFLNLRTTANNNNSNNNNTASDSDASQTPNQWLSRTSSSLLHRNHSDVIDDVTPANDSII-----AAVESADLKNANSENMNNASTNNKSEGVVVESGADGVVNWQNARYKAEILSHPLYEQLLSAHVACLRIATPVDQLPRIDAQLAQSQHVVSKYSALGAG-QGLVTDDKELDQFMTHYVLLLCSFKEQLQQHVRVHAMEAVMACWEIEQSLQSLTGVSPGEGTGATMSDDDEDQVDSDANLFDGSLEGPDTMGFGPLIPTESERSLMERVRQELKHELKQGYKEKIVDIREEILRKRRAGKLPGDTTSVLKSWWQSHSKWPYPTEEDKARLVQETGLQLKQINNWFINQRKRNWHSNPSTSTVLKSKRKRSNAGENSSDRYM 450
[Close]
BLAST of g.arboreum_cottongen_reftransV1_0020515 vs. ExPASy TrEMBL
Match: A0A067KBM7_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_07118 PE=4 SV=1)

HSP 1 Score: 550.051 bits (1416), Expect = 0.000e+0
Identity = 329/450 (73.11%), Postives = 362/450 (80.44%), Query Frame = -3 
Query:  444 MAFHHNNHLSDHHQDLPLHHLTEHHHQQAS-----QLSE-TNGPNWLNTALLRXXXXXXXXXXXXQFAEPNFLNLHTTRAASDSTTGSQAPNQWLSRTSSSLLHRNHSDVIDDVXXXXXXXXX---XXXESMVAMEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVNWQNARYKADILAHPLCEQLLSAHVACLRVATPVDQLPRIDAQLAQSQHVVAKYSSLSGGSQGVVADDKELDQFLTHYVLLLCSFKEQLQQHVRVHAMEAVMACWEIEQSLQSLTGVSPGEGTGATMXXXXXXXXXXDGNLFDGSLEGPDSMGFGPLILTDSEKSLMERVRHELKHELKQGYKEKIVDIREEILRKRRAGKLPGDTTSVLKAWWQSHSKWPYPTEEDKARLVQETGLQLKQINNWFINQRKRNWNSNPXXXXX-XXXXXXSNAGENNGDRFM 1763
            MAFHHN  LS   QD+PLHH ++             LSE T  PNWLNTALLR+QQPQ        F + NFLNLHTT   +  +T SQ P QWLSR SSS+L+RNHSDVIDDV AA                 +++  + N+  + N ++   V    GGGGGDGVVNWQNARYKADILAHPL EQLLSAHVACLR+ATPVDQLPRIDAQLAQSQHVVAKYS+L  G+QG+V DDKELDQF+THY LLLCSFKEQLQQHVRVHAMEAVMACWEIEQSLQSLTGVSPGEGTGATMSDDD+DQVDSD NLFD SL+G D+MGFGPLI T+SE+SLMERVR ELKHELKQGYKEKI DIREEILRKRRAGKLPGDTTSVLKAWWQSHSKWPYPTEEDKARLVQETGLQLKQINNWFINQRKRNW+SNPSTSTV    +++SNAG+N+GDRFM
Sbjct:    1 MAFHHN--LS---QDIPLHHFSDQTQPPQQAQQQQNLSESTTAPNWLNTALLRTQQPQHPPHSH--FTDTNFLNLHTTSTTNSDSTASQNPTQWLSR-SSSILNRNHSDVIDDVTAATATDSIIAGTISRESADLKTNTNNNSENMTNKSEGGVVESGGGGGGGDGVVNWQNARYKADILAHPLYEQLLSAHVACLRIATPVDQLPRIDAQLAQSQHVVAKYSALGAGAQGLVGDDKELDQFMTHYFLLLCSFKEQLQQHVRVHAMEAVMACWEIEQSLQSLTGVSPGEGTGATMSDDDEDQVDSDANLFDPSLDGADTMGFGPLIPTESERSLMERVRQELKHELKQGYKEKIADIREEILRKRRAGKLPGDTTSVLKAWWQSHSKWPYPTEEDKARLVQETGLQLKQINNWFINQRKRNWHSNPSTSTVLKSKRKRSNAGDNSGDRFM 442
[Close]
BLAST of g.arboreum_cottongen_reftransV1_0020515 vs. ExPASy Swiss-Prot
Match: KNAT3_ARATH (Homeobox protein knotted-1-like 3 OS=Arabidopsis thaliana GN=KNAT3 PE=1 SV=1)

HSP 1 Score: 491.886 bits (1265), Expect = 2.078e-166
Identity = 303/467 (64.88%), Postives = 337/467 (72.16%), Query Frame = -3 
Query:  447 MAFHHNNHLSDHHQDLPLHHLTEHHHQQASQ-----------LSETNGPNWLNTALLRXXXXXXXXXXXXQFAEPNFLNLHTTRAASDSTTGSQAP---------NQWLSRTSSSLLHRNHS-------DVIDDVXXXXXXXXXXXXESMVAMEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVNWQNARYKADILAHPLCEQLLSAHVACLRVATPVDQLPRIDAQLAQSQHVVAKYSSLSGGSQGVVADDKELDQFLTHYVLLLCSFKEQLQQHVRVHAMEAVMACWEIEQSLQSLTGVSPGEGTGATMXXXXXXXXXXDGNLFDGSLEGPDSMGFGPLILTDSEKSLMERVRHELKHELKQGYKEKIVDIREEILRKRRAGKLPGDTTSVLKAWWQSHSKWPYPTEEDKARLVQETGLQLKQINNWFINQRKRNWNSNPXXXXXXXXXXXSNAGENNG-DRF 1763
            MAFHHN HLS   QDL  +H T+ H     Q             E   PNWLNTALLRS                NFLNLHT  A + + + S +P         NQWLSR SSS L RN++       D IDDV    +        +M+  E    G  N       +    V           +WQNAR+KA+IL+HPL EQLLSAHVACLR+ATPVDQLPRIDAQLAQSQHVVAKYS+L   +QG+V DDKELDQF+THYVLLLCSFKEQLQQHVRVHAMEAVMACWEIEQSLQSLTGVSPGEG GATMSDD+D+QV+SD N+FDG L   D +GFGPLI T+SE+SLMERVR ELKHELKQGYKEKIVDIREEILRKRRAGKLPGDTTSVLKAWWQSHSKWPYPTEEDKARLVQETGLQLKQINNWFINQRKRNW+SNPS+STV K+KRKSNAG+N+G +RF
Sbjct:    1 MAFHHN-HLS---QDLSFNHFTDQHQPPPPQPPPPPPQQQQHFQEAPPPNWLNTALLRSSDNNN-----------NFLNLHTATANTTTASSSDSPSSAAAAAAANQWLSR-SSSFLQRNNNNNASIVGDGIDDVTGGAD--------TMIQGEMKTGGGENKNDGGGATAADGVV----------SWQNARHKAEILSHPLYEQLLSAHVACLRIATPVDQLPRIDAQLAQSQHVVAKYSALGAAAQGLVGDDKELDQFMTHYVLLLCSFKEQLQQHVRVHAMEAVMACWEIEQSLQSLTGVSPGEGMGATMSDDEDEQVESDANMFDGGL---DVLGFGPLIPTESERSLMERVRQELKHELKQGYKEKIVDIREEILRKRRAGKLPGDTTSVLKAWWQSHSKWPYPTEEDKARLVQETGLQLKQINNWFINQRKRNWHSNPSSSTVLKNKRKSNAGDNSGRERF 430
[Close]
BLAST of g.arboreum_cottongen_reftransV1_0020515 vs. ExPASy Swiss-Prot
Match: KNAP3_MALDO (Homeobox protein knotted-1-like 3 OS=Malus domestica PE=2 SV=1)

HSP 1 Score: 482.641 bits (1241), Expect = 7.412e-163
Identity = 296/445 (66.52%), Postives = 327/445 (73.48%), Query Frame = -3 
Query:  513 MAFHHNNHLSDHHQDLPLHHLT----------------------EHHHQQASQLSETNGPNWLNTALLRXXXXXXXXXXXXQFAEPN------FLNLHTTRAASDSTTGSQAPNQWLSRTSSSLLHRNHSDVIDDVXXXXXXXXXXXXESMVAMEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVNWQNARYKADILAHPLCEQLLSAHVACLRVATPVDQLPRIDAQLAQSQHVVAKYSSLSGGSQGVVADDKELDQFLTHYVLLLCSFKEQLQQHVRVHAMEAVMACWEIEQSLQSLTGVSPGEGTGATMXXXXXXXXXXDGNLFDGSLEGPDSMGFGPLILTDSEKSLMERVRHELKHELKQGYKEKIVDIREEILRKRRAGKLPGDTTSVLKAWWQSHSKWPYPTEEDKARLVQETGLQLKQINNWFINQRKRNWNSNP 1763
            MA+H  NHLS   QDLPLHH T                      E HH      S    PNWLN+ALLR+       P +S  A  N      FLNLH T + S ++  S   NQWLS++   +LHRNHSDV DDV  AG+        SM+A     +  ++   +      +    GGGG  GV+NWQNAR+KA+ILAHPL E LLSAHVACLR+ATPVDQLPRIDAQLAQSQ+VVAKYS+L  G   +V DDKELDQF+ +YVLLLCSFKEQLQQHVRVHAMEAVMACWEIEQSLQSLTGVSPGEGT ATMSDD+DDQVDSD NLFD  +EG DSMGFGPLI T+SE+SLMERVR ELKHELKQGYKEKIVDIREEILRKRRAGKLPGDTTSVLKAWWQSHSKWPYPTEEDKARLVQETGLQLKQINNWFINQRKRNW+SNP
Sbjct:    1 MAYH--NHLS---QDLPLHHFTDQTHHQHQQYQSDQPDPNSKPPEPHH------SFQPAPNWLNSALLRNFTNTDTNPTNSNNANNNGGGVSNFLNLHVTASDSAASQAS---NQWLSQSHRPILHRNHSDVNDDVTVAGD--------SMIA-----AALSHDSADLKPDSILNKNEGGGGDGGVMNWQNARHKAEILAHPLYEPLLSAHVACLRIATPVDQLPRIDAQLAQSQNVVAKYSALGNG---MVGDDKELDQFMRNYVLLLCSFKEQLQQHVRVHAMEAVMACWEIEQSLQSLTGVSPGEGTSATMSDDEDDQVDSDANLFDEGMEGHDSMGFGPLIPTESERSLMERVRQELKHELKQGYKEKIVDIREEILRKRRAGKLPGDTTSVLKAWWQSHSKWPYPTEEDKARLVQETGLQLKQINNWFINQRKRNWHSNP 415
[Close]
BLAST of g.arboreum_cottongen_reftransV1_0020515 vs. ExPASy Swiss-Prot
Match: KNAT4_ARATH (Homeobox protein knotted-1-like 4 OS=Arabidopsis thaliana GN=KNAT4 PE=1 SV=3)

HSP 1 Score: 462.996 bits (1190), Expect = 1.101e-155
Identity = 279/449 (62.14%), Postives = 317/449 (70.60%), Query Frame = -3 
Query:  456 MAFHHNNHLSDHHQDLPLHHLTEHHHQQASQLSETNGPNWLNTALLRXXXXXXXXXXXXQFAEPNFLNLHTTRAASDSTTGSQAP---NQWLSRTSSSLLHRNHS----------DVIDDVXXXXXXXXXXXXESMVAMEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVNWQNARYKADILAHPLCEQLLSAHVACLRVATPVDQLPRIDAQLAQSQHVVAKYSSLSGGSQGVVADDKELDQFLTHYVLLLCSFKEQLQQHVRVHAMEAVMACWEIEQSLQSLTGVSPGEGTGATMXXXXXXXXXXDGNLFDGSLEGPDSMGFGPLILTDSEKSLMERVRHELKHELKQGYKEKIVDIREEILRKRRAGKLPGDTTSVLKAWWQSHSKWPYPTEEDKARLVQETGLQLKQINNWFINQRKRNWNSNPXXXXXXXXXXXSNAGENNG 1763
            MAFH NNH +                QQ     E+  PNWL    LR              ++ NFLNLHT  +A+ +++ S +    NQWLSR SSS L R ++          DVI+DV    E        SM+                                    WQNAR+KA+IL+HPL EQLLSAHVACLR+ATPVDQLPRIDAQLAQSQ+VVAKYS+L      +  DDKELD F+THYVLLLCSFKEQLQQHVRVHAMEAVMACWEIEQSLQS TGVSPGEGTGATMS+D+D+QV+SD +LFDGSL+G   +GFGPL+ T+SE+SLMERVR ELKHELKQGYKEKIVDIREEILRKRRAGKLPGDTTSVLK+WWQSHSKWPYPTEEDKARLVQETGLQLKQINNWFINQRKRNW+SNPS+STVSK+KR+SNAGEN+G
Sbjct:    1 MAFH-NNHFNHFTDQQQHQPPPPPQQQQQQHFQESAPPNWL----LR--------------SDNNFLNLHTAASAAATSSDSPSSAAANQWLSR-SSSFLQRGNTANNNNNETSGDVIEDVPGGEE--------SMIG----------------------------EKKEAERWQNARHKAEILSHPLYEQLLSAHVACLRIATPVDQLPRIDAQLAQSQNVVAKYSTLEAAQGLLAGDDKELDHFMTHYVLLLCSFKEQLQQHVRVHAMEAVMACWEIEQSLQSFTGVSPGEGTGATMSEDEDEQVESDAHLFDGSLDG---LGFGPLVPTESERSLMERVRQELKHELKQGYKEKIVDIREEILRKRRAGKLPGDTTSVLKSWWQSHSKWPYPTEEDKARLVQETGLQLKQINNWFINQRKRNWHSNPSSSTVSKNKRRSNAGENSG 390
[Close]
BLAST of g.arboreum_cottongen_reftransV1_0020515 vs. ExPASy Swiss-Prot
Match: LET12_SOLLC (Homeobox protein knotted-1-like LET12 OS=Solanum lycopersicum GN=LET12 PE=2 SV=1)

HSP 1 Score: 432.565 bits (1111), Expect = 2.047e-143
Identity = 219/258 (84.88%), Postives = 236/258 (91.47%), Query Frame = -3 
Query:  513 NWQNARYKADILAHPLCEQLLSAHVACLRVATPVDQLPRIDAQLAQSQHVVAKYSSLSGGSQGVVADDKELDQFLTHYVLLLCSFKEQLQQHVRVHAMEAVMACWEIEQSLQSLTGVSPGEGTGATMXXXXXXXXXXDGNLFDGSLEGPDSMGFGPLILTDSEKSLMERVRHELKHELKQGYKEKIVDIREEILRKRRAGKLPGDTTSVLKAWWQSHSKWPYPTEEDKARLVQETGLQLKQINNWFINQRKRNWNSNP 1286
            +W+  + KADIL HPL +QLLSAHV+CLR+ATPVDQLPRIDAQLAQSQ+VVAKYS L  G   +  DDK+LDQF+THYVLLL SFKEQLQQHVRVHAMEAVMACWE+EQSLQSLTGV+PGEGTGATMSDDDDDQ DSD N  DG  +GPDSMGFGPL+ T+SE+SLMERVR ELKHELKQGYKEKIVDIREEILRKRRAGKLPGDTTSVLKAWWQSHSKWPYPTEEDKARLVQETGLQLKQINNWFINQRKRNW+SNP
Sbjct:  157 SWEREKCKADILNHPLYDQLLSAHVSCLRIATPVDQLPRIDAQLAQSQNVVAKYSVLGQGQPPL--DDKDLDQFMTHYVLLLSSFKEQLQQHVRVHAMEAVMACWELEQSLQSLTGVAPGEGTGATMSDDDDDQADSDTNFLDGGFDGPDSMGFGPLVPTESERSLMERVRQELKHELKQGYKEKIVDIREEILRKRRAGKLPGDTTSVLKAWWQSHSKWPYPTEEDKARLVQETGLQLKQINNWFINQRKRNWHSNP 412
[Close]
BLAST of g.arboreum_cottongen_reftransV1_0020515 vs. ExPASy Swiss-Prot
Match: KNOSD_ORYSJ (Homeobox protein knotted-1-like 13 OS=Oryza sativa subsp. japonica GN=OSH45 PE=2 SV=2)

HSP 1 Score: 424.861 bits (1091), Expect = 4.206e-141
Identity = 223/271 (82.29%), Postives = 248/271 (91.51%), Query Frame = -3 
Query:  459 RYKADILAHPLCEQLLSAHVACLRVATPVDQLPRIDAQLAQSQHVVAKYSSLSGGSQGVVADDKELDQFLTHYVLLLCSFKEQLQQHVRVHAMEAVMACWEIEQSLQSLTGVSPGEGTGATMXXXXXXXXXXDGNLFDGSLEGPDSMGFGPLILTDSEKSLMERVRHELKHELKQGYKEKIVDIREEILRKRRAGKLPGDTTSVLKAWWQSHSKWPYPTEEDKARLVQETGLQLKQINNWFINQRKRNWNSNPXXXXXXXXXXXSNAGENN 1271
            R KA+ILAHPL EQLLSAHVACLR+ATPVDQLPRIDAQLAQSQ VVAKYS+L+  + G   D +ELDQF+THYVLLLCSFKEQLQQHVRVHAMEAVMACWE+EQ+LQSLTG SPGEGTGATMSD +DDQ DS+ N++D SL+G D+MGFG  + T+SE+SLMERVR ELKHELKQGYKEK++DIREEILRKRRAGKLPGDTTS LKAWWQSH+KWPYPTEEDKARLVQETGLQLKQINNWFINQRKRNW+SNPS+ST  K+KRKSNAG+NN
Sbjct:  107 RCKAEILAHPLYEQLLSAHVACLRIATPVDQLPRIDAQLAQSQGVVAKYSALAAAAAG--DDGRELDQFMTHYVLLLCSFKEQLQQHVRVHAMEAVMACWELEQNLQSLTGASPGEGTGATMSDGEDDQADSEANMYDPSLDGADNMGFG--LPTESERSLMERVRQELKHELKQGYKEKLIDIREEILRKRRAGKLPGDTTSTLKAWWQSHAKWPYPTEEDKARLVQETGLQLKQINNWFINQRKRNWHSNPSSSTSVKTKRKSNAGDNN 373
[Close]
BLAST of g.arboreum_cottongen_reftransV1_0020515 vs. ExPASy Swiss-Prot
Match: KNAT5_ARATH (Homeobox protein knotted-1-like 5 OS=Arabidopsis thaliana GN=KNAT5 PE=1 SV=2)

HSP 1 Score: 392.504 bits (1007), Expect = 2.263e-128
Identity = 195/256 (76.17%), Postives = 220/256 (85.94%), Query Frame = -3 
Query:  525 NWQNARYKADILAHPLCEQLLSAHVACLRVATPVDQLPRIDAQLAQSQHVVAKYSSLSGGSQGVVADDKELDQFLTHYVLLLCSFKEQLQQHVRVHAMEAVMACWEIEQSLQSLTGVSPGEGTGATMXXXXXXXXXXDG-NLFDGSLEGPDS-MGFGPLILTDSEKSLMERVRHELKHELKQGYKEKIVDIREEILRKRRAGKLPGDTTSVLKAWWQSHSKWPYPTEEDKARLVQETGLQLKQINNWFINQRKRNW 1286
            +W++A YKA IL HP+ EQLL+AHVACLRVATPVDQ+PRIDAQL+Q   V AKYS+L     GVV D+KELD F++HYV+LLCSFKEQLQ HV VHAMEA+ ACWEIEQSLQSLTGVSP E  G TMSDD+DD       N+FDGSL+G D  MGFGPL+ T+ E+SLMERV+ ELKHELKQG+KEKIVDIREEI+RKRRAGKLPGDTTSVLK WW++HSKWPYPTEEDKA+LVQETGLQLKQINNWFINQRKRNW
Sbjct:  112 DWRSASYKAAILRHPMYEQLLAAHVACLRVATPVDQIPRIDAQLSQLHTVAAKYSTL-----GVVVDNKELDHFMSHYVVLLCSFKEQLQHHVCVHAMEAITACWEIEQSLQSLTGVSPSESNGKTMSDDEDDNQVESEVNMFDGSLDGSDCLMGFGPLVPTERERSLMERVKKELKHELKQGFKEKIVDIREEIMRKRRAGKLPGDTTSVLKEWWRTHSKWPYPTEEDKAKLVQETGLQLKQINNWFINQRKRNW 362
[Close]
BLAST of g.arboreum_cottongen_reftransV1_0020515 vs. ExPASy Swiss-Prot
Match: KNOS2_ORYSJ (Homeobox protein knotted-1-like 2 OS=Oryza sativa subsp. japonica GN=HOS58 PE=2 SV=2)

HSP 1 Score: 382.874 bits (982), Expect = 1.194e-125
Identity = 196/253 (77.47%), Postives = 221/253 (87.35%), Query Frame = -3 
Query:  513 RYKADILAHPLCEQLLSAHVACLRVATPVDQLPRIDAQLAQSQHVVAKYSSLSGGSQGVVADDKELDQFLTHYVLLLCSFKEQLQQHVRVHAMEAVMACWEIEQSLQSLTGVSPGEGTGATMXXXXXXXXXXDGNLFDGSLEGPDSMGFGPLILTDSEKSLMERVRHELKHELKQGYKEKIVDIREEILRKRRAGKLPGDTTSVLKAWWQSHSKWPYPTEEDKARLVQETGLQLKQINNWFINQRKRNWNSNP 1271
            R KA + AHPL E+LL AHVACLRVATPVDQLPRIDAQ+A     +A  S+ +        +  ELD F+THYVLLLCSFKEQLQQHVRVHAMEAVM CWE+EQSLQSLTG SPGEGTGATMSDD+D+QVDS+ N+FDG+ +G D MGFGPL+LT+ E+SL+ERVRHELK+ELKQGYKEK+VDIREEILRKRRAGKLPGDT S+LKAWWQ+HSKWPYPTE+DKARLVQETGLQLKQINNWFINQRKRNW+SNP
Sbjct:   41 REKAAVAAHPLYERLLEAHVACLRVATPVDQLPRIDAQIAARPPPLAAASAAAAAGGPSGGE--ELDLFMTHYVLLLCSFKEQLQQHVRVHAMEAVMGCWELEQSLQSLTGASPGEGTGATMSDDEDNQVDSEANMFDGN-DGSDGMGFGPLMLTEGERSLVERVRHELKNELKQGYKEKLVDIREEILRKRRAGKLPGDTASILKAWWQAHSKWPYPTEDDKARLVQETGLQLKQINNWFINQRKRNWHSNP 290
[Close]
BLAST of g.arboreum_cottongen_reftransV1_0020515 vs. ExPASy Swiss-Prot
Match: KNOSB_ORYSJ (Homeobox protein knotted-1-like 11 OS=Oryza sativa subsp. japonica GN=HOS59 PE=2 SV=2)

HSP 1 Score: 374.785 bits (961), Expect = 2.137e-122
Identity = 195/255 (76.47%), Postives = 221/255 (86.67%), Query Frame = -3 
Query:  513 RYKADILAHPLCEQLLSAHVACLRVATPVDQLPRIDAQLAQSQHVVAKYSSLSGGSQGVVADD--KELDQFLTHYVLLLCSFKEQLQQHVRVHAMEAVMACWEIEQSLQSLTGVSPGEGTGATMXXXXXXXXXXDGNLFDGSLEGPDSMGFGPLILTDSEKSLMERVRHELKHELKQGYKEKIVDIREEILRKRRAGKLPGDTTSVLKAWWQSHSKWPYPTEEDKARLVQETGLQLKQINNWFINQRKRNWNSNP 1271
            R KA I AHPL E+LL AHVACLRVATPVDQLPRIDAQ+A     +A  ++ +  +    A    +ELD F+THYVLLLCSFKEQLQQHVRVHAMEAVMACWE+EQ+LQSLTG SP EG+GATMSDD+D+QVDS+ N+FDG+ +G D MGFGPL+LT+ E+SL+ERVR ELKHELKQGY+EK+VDIREEILRKRRAGKLPGDT S LKAWWQ+HSKWPYPTEEDKARLVQETGLQLKQINNWFINQRKRNW+SNP
Sbjct:   46 REKAAIAAHPLYERLLEAHVACLRVATPVDQLPRIDAQIAARPPPLAAATAAAAAAAAGGAPSGGEELDLFMTHYVLLLCSFKEQLQQHVRVHAMEAVMACWELEQTLQSLTGASPREGSGATMSDDEDNQVDSESNMFDGN-DGSDGMGFGPLMLTEGERSLVERVRQELKHELKQGYREKLVDIREEILRKRRAGKLPGDTASTLKAWWQAHSKWPYPTEEDKARLVQETGLQLKQINNWFINQRKRNWHSNP 299
[Close]
BLAST of g.arboreum_cottongen_reftransV1_0020515 vs. ExPASy Swiss-Prot
Match: KNOS3_ORYSJ (Homeobox protein knotted-1-like 3 OS=Oryza sativa subsp. japonica GN=HOS66 PE=2 SV=1)

HSP 1 Score: 342.813 bits (878), Expect = 3.822e-110
Identity = 172/255 (67.45%), Postives = 202/255 (79.22%), Query Frame = -3 
Query:  516 KADILAHPLCEQLLSAHVACLRVATPVDQLPRIDAQLAQSQHVVAKYSS-----LSGGSQGVVADDKELDQFLTHYVLLLCSFKEQLQQHVRVHAMEAVMACWEIEQSLQSLTGVSPGEGTGATMXXXXXXXXXXDGNLFDGSLEGPDSMGFGPLILTDSEKSLMERVRHELKHELKQGYKEKIVDIREEILRKRRAGKLPGDTTSVLKAWWQSHSKWPYPTEEDKARLVQETGLQLKQINNWFINQRKRNWNSN 1265
            K +I  HPLCEQL++AHV CLRVATP+D LP IDAQLAQS  ++  Y++     LS        D +ELD FL  Y++LLCSF+EQLQQHVRVHA+EAVMAC EIEQSLQ LTG +  EGTGATMS+D+D+         D   +G D MGFGPL+ TDSE+SLMERVR ELK ELKQG+K +I D+REEILRKRRAGKLPGDTT++LK WWQ HSKWPYPTE+DKA+LV+ETGLQLKQINNWFINQRKRNW++N
Sbjct:   54 KGEIAVHPLCEQLVAAHVGCLRVATPIDHLPLIDAQLAQSSGLLHSYAAHHRPFLS------PHDKQELDSFLAQYMMLLCSFREQLQQHVRVHAVEAVMACREIEQSLQDLTGATLEEGTGATMSEDEDETAPMLEGPMDMGSDGHDLMGFGPLMPTDSERSLMERVRQELKIELKQGFKSRIEDVREEILRKRRAGKLPGDTTTILKQWWQQHSKWPYPTEDDKAKLVEETGLQLKQINNWFINQRKRNWHNN 302
[Close]
BLAST of g.arboreum_cottongen_reftransV1_0020515 vs. ExPASy Swiss-Prot
Match: KNAT7_ARATH (Homeobox protein knotted-1-like 7 OS=Arabidopsis thaliana GN=KNAT7 PE=1 SV=1)

HSP 1 Score: 340.502 bits (872), Expect = 1.091e-109
Identity = 174/260 (66.92%), Postives = 207/260 (79.62%), Query Frame = -3 
Query:  516 QNARYKADILAHPLCEQLLSAHVACLRVATPVDQLPRIDAQLAQSQHVVAKYSSLSGGSQGVVADDKELDQFLTHYVLLLCSFKEQLQQHVRVHAMEAVMACWEIEQSLQSLTGVSPGEGTGATMXXXXXX-----XXXXDGNLFDGSLEGPDSMGFGPLILTDSEKSLMERVRHELKHELKQGYKEKIVDIREEILRKRRAGKLPGDTTSVLKAWWQSHSKWPYPTEEDKARLVQETGLQLKQINNWFINQRKRNWNSN 1280
            QN + K +I  HP+ EQLL+AHVACLRVATP+DQLP I+AQL+QS H++  Y+S + G      D  ELD FL  YV++LCSFKEQLQQHVRVHA+EAVMAC EIE +L SLTG + GEG+GATMS+D+DD       D+ G  F G   G D  GFGPL+ T+SE+SLMERVR ELK ELKQG+K +I D+REEI+RKRRAGKLPGDTT+VLK WWQ H KWPYPTE+DKA+LV+ETGLQLKQINNWFINQRKRNW++N
Sbjct:   25 QNRQLKGEIATHPMYEQLLAAHVACLRVATPIDQLPIIEAQLSQSHHLLRSYASTAVGYH---HDRHELDNFLAQYVMVLCSFKEQLQQHVRVHAVEAVMACREIENNLHSLTGATLGEGSGATMSEDEDDLPMDFSSDNSGVDFSG---GHDMTGFGPLLPTESERSLMERVRQELKLELKQGFKSRIEDVREEIMRKRRAGKLPGDTTTVLKNWWQQHCKWPYPTEDDKAKLVEETGLQLKQINNWFINQRKRNWHNN 278
The following BLAST results are available for this feature:
BLAST of g.arboreum_cottongen_reftransV1_0020515 vs. ExPASy TrEMBL
Analysis Date: 2016-11-15 (Homology Analysis for Gossypium arboreum CottonGen RefTrans V1 vs TrEMBL)
Total hits: 25
Match NameE-valueIdentityDescription
A0A0B0MNT4_GOSAR0.000e+0100.00Homeobox protein knotted-1-like 3 OS=Gossypium arb... [more]
A0A0D2W871_GOSRA0.000e+099.32Uncharacterized protein OS=Gossypium raimondii GN=... [more]
A0A0D2U4U7_GOSRA0.000e+097.51Uncharacterized protein OS=Gossypium raimondii GN=... [more]
A0A0D2SHV3_GOSRA0.000e+099.28Uncharacterized protein OS=Gossypium raimondii GN=... [more]
A0A0D2VGS1_GOSRA0.000e+099.28Uncharacterized protein OS=Gossypium raimondii GN=... [more]
A0A067E6C7_CITSI0.000e+072.73Uncharacterized protein OS=Citrus sinensis GN=CISI... [more]
V4UMG7_9ROSI0.000e+072.73Uncharacterized protein OS=Citrus clementina GN=CI... [more]
A0A067DVD8_CITSI0.000e+071.49Uncharacterized protein OS=Citrus sinensis GN=CISI... [more]
V4UC09_9ROSI0.000e+071.49Uncharacterized protein OS=Citrus clementina GN=CI... [more]
A0A067KBM7_JATCU0.000e+073.11Uncharacterized protein OS=Jatropha curcas GN=JCGZ... [more]

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BLAST of g.arboreum_cottongen_reftransV1_0020515 vs. ExPASy Swiss-Prot
Analysis Date: 2016-11-15 (Homology Analysis for Gossypium arboreum CottonGen RefTrans V1 vs SwissProt)
Total hits: 25
Match NameE-valueIdentityDescription
KNAT3_ARATH2.078e-16664.88Homeobox protein knotted-1-like 3 OS=Arabidopsis t... [more]
KNAP3_MALDO7.412e-16366.52Homeobox protein knotted-1-like 3 OS=Malus domesti... [more]
KNAT4_ARATH1.101e-15562.14Homeobox protein knotted-1-like 4 OS=Arabidopsis t... [more]
LET12_SOLLC2.047e-14384.88Homeobox protein knotted-1-like LET12 OS=Solanum l... [more]
KNOSD_ORYSJ4.206e-14182.29Homeobox protein knotted-1-like 13 OS=Oryza sativa... [more]
KNAT5_ARATH2.263e-12876.17Homeobox protein knotted-1-like 5 OS=Arabidopsis t... [more]
KNOS2_ORYSJ1.194e-12577.47Homeobox protein knotted-1-like 2 OS=Oryza sativa ... [more]
KNOSB_ORYSJ2.137e-12276.47Homeobox protein knotted-1-like 11 OS=Oryza sativa... [more]
KNOS3_ORYSJ3.822e-11067.45Homeobox protein knotted-1-like 3 OS=Oryza sativa ... [more]
KNAT7_ARATH1.091e-10966.92Homeobox protein knotted-1-like 7 OS=Arabidopsis t... [more]

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InterPro
Analysis Name: InterProScan analysis for Gossypium arboreum CottonGen RefTrans V1
Date Performed: 2016-11-14
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR005541KNOX2SMARTSM01256KNOX2_2coord: 220..275
e-value: 4.8E-28
score: 109.2
IPR005541KNOX2PFAMPF03791KNOX2coord: 224..274
e-value: 7.5E-20
score: 70.2
IPR001356Homeobox domainSMARTSM00389HOX_1coord: 354..419
e-value: 5.1E-11
score: 52.6
IPR001356Homeobox domainPROSITEPS50071HOMEOBOX_2coord: 352..415
score: 11.791
IPR005539ELK domainSMARTSM01188ELK_2coord: 332..353
e-value: 6.1E-4
score: 29.1
IPR005539ELK domainPFAMPF03789ELKcoord: 332..353
e-value: 1.0E-6
score: 28.5
IPR005539ELK domainPROSITEPS51213ELKcoord: 332..352
score: 9.969
IPR005540KNOX1SMARTSM01255KNOX1_2coord: 164..208
e-value: 6.9E-19
score: 78.7
IPR005540KNOX1PFAMPF03790KNOX1coord: 166..207
e-value: 1.9E-17
score: 62.6
IPR008422Homeobox KN domainPFAMPF05920Homeobox_KNcoord: 372..411
e-value: 1.2E-17
score: 63.3
IPR009057Homeodomain-likeGENE3D1.10.10.60coord: 359..416
e-value: 3.1E-25
score: 87.2
IPR009057Homeodomain-likeSUPERFAMILY46689Homeodomain-likecoord: 354..418
NoneNo IPR availablePANTHERPTHR11850HOMEOBOX PROTEIN TRANSCRIPTION FACTORScoord: 137..440
NoneNo IPR availablePANTHERPTHR11850:SF122HOMEOBOX PROTEIN KNOTTED-1-LIKE 3-RELATEDcoord: 137..440

Sequences
The following sequences are available for this feature:

contig sequence

>g.arboreum_cottongen_reftransV1_0020515 ID=g.arboreum_cottongen_reftransV1_0020515; Name=g.arboreum_cottongen_reftransV1_0020515; organism=Gossypium arboreum; type=contig; length=2068bp
GCCATTTTCCTTTACTGGGAAATAAAGAGGTCCATTTTCCAGTGATTGTA
GCTTGATTCCATAGCCAAATTTCAAAACGTACAAACAATCAGTTATGGGA
ATAAAGAGCCAATTTTCCCAGTACTGGGAAACAGAGAGGCCAACACAGCT
CTTATCCACAAACATCATCAACTGCATTTTTCAGATGCAGATTTCCATTT
CCAAGGATCAACCCAGTTTTCTTTCTTTTTTTTTTTTACTCAAAAAAAAC
TATAATGATCTCTTTTTTTTTATTCACCAACATGAACTCTATCTATCAAG
TGACAATGGTGGATTCATCCAATAAAAGTTACACTGAAATATATATATGA
ATGATATTGTATTGCATTGCATGGCCAACATATATATATATATATAGCAC
CAAACCAAAAATCTGTTCCTCTTTGGCTACTGTCTTGCATTTACATGAAC
CGATCACCATTGTTTTCACCTGCATTACTTTTACGTTTGCTTTTCGAGAC
GGTGGATGTCGACGGATTGCTGTTCCAGTTCCTTTTCCTCTGATTAATGA
ACCAATTGTTTATCTGTTTCAATTGTAAACCTGTTTCTTGAACCAATCTC
GCCTTATCTTCCTCAGTAGGGTATGGCCACTTGGAATGTGATTGCCACCA
TGCTTTTAACACCGATGTTGTGTCACCTGGTAGCTTTCCAGCCCTTCTTT
TCCGCAAAATTTCTTCTCTTATGTCAACAATCTTCTCCTTGTAACCCTGT
TTGAGTTCATGTTTGAGTTCATGTCTCACACGCTCCATCAAAGATTTTTC
ACTATCTGTTAAGATCAGAGGGCCGAATCCCATTGAATCTGGACCTTCTA
AACTTCCGTCAAACAAGTTGCCATCACTGTCTACTTGATCATCGTCATCA
TCAGACATTGTTGCACCCGTGCCTTCACCCGGAGAAACACCTGTTAAGCT
TTGTAATGATTGTTCAATTTCCCAGCAAGCCATAACTGCTTCCATTGCAT
GAACTCGAACATGTTGTTGCAATTGTTCTTTGAAAGAACATAGCAACAGA
ACATAATGTGTCAAGAACTGATCGAGCTCTTTGTCGTCGGCAACCACGCC
CTGGGACCCACCACTGAGGGAGGAGTACTTAGCCACCACATGCTGTGACT
GAGCCAGCTGAGCGTCGATCCTCGGGAGCTGATCCACAGGCGTAGCGACC
CTAAGGCACGCCACGTGTGCAGACAAAAGTTGCTCGCACAAAGGGTGAGC
TAGTATGTCCGCCTTGTATCTTGCATTCTGCCAATTCACGACCCCATCCC
CACCGCCCCCTCCGCTTTCCACCACAACACCTTCGCTCTTGTTGTTGTTC
ATAATACCGTTGTTGTTGCCGCTGCCGCCCGATTCCATGGCGACCATGGA
TTCCCCTCCGCCTCCTCTCGCAGCTTCCCCCGCGGCACCTACGTCGTCTA
TGACGTCGCTGTGGTTGCGATGAAGAAGGGAGGACGACGTACGGGAGAGC
CACTGGTTCGGAGCTTGGGAACCCGTGGTGGAATCAGAAGCAGCTCGCGT
AGTATGAAGGTTAAGAAAGTTAGGCTCGGCGAACTGGGAAGAGTGTGGCT
GCGCCGGTTGAGGCTGCTGTGAACGGAGCAGGGCGGTGTTCAACCAATTT
GGACCGTTGGTTTCCGACAGTTGACTCGCCTGCTGGTGGTGGTGCTCGGT
AAGGTGATGGAGAGGAAGGTCCTGATGATGATCAGAAAGGTGATTATTAT
GGTGAAACGCCATGACTACCCCCCCTCACCTTTATCCTATTTCTCTTCCT
GTAAAAACGTGTTCGAAAGCTATATATGATGATGATTACTGTTCCATGGT
CTGATATAGAGAAGGAGATTACAACAAAGGACAGCGAAATCCAAGGACAC
GATTGAAAAGATTGTTTTTTTTTCCCCCTTTTTTTCTTACAATCCTAACT
TAAAGACACAGTCTTTGAATTTAGAGAGAGAAATAACGTGAGAGAGCATA
AACAAAGGTGAGAACTTTGAGGATATATGCTGCAAGAGAGAGAAGAGGAA
GGAGAAAAGTAGTTTTCG
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Annotated Terms
The following terms have been associated with this contig:
Vocabulary: INTERPRO
TermDefinition
IPR005541KNOX2
IPR001356Homeobox_dom
IPR005539ELK_dom
IPR005540KNOX1
IPR008422Homeobox_KN_domain
IPR009057Homeobox-like_sf
Vocabulary: Cellular Component
TermDefinition
GO:0005634nucleus
Vocabulary: Molecular Function
TermDefinition
GO:0003677DNA binding
Vocabulary: Biological Process
TermDefinition
GO:0006355regulation of DNA-templated transcription