g.arboreum_cottongen_reftransV1_0010388, g.arboreum_cottongen_reftransV1_0010388 (contig) Gossypium arboreum
Overview
Alignments
The following features are aligned
Analyses
This contig is derived from or has results from the following analyses
Homology
BLAST of g.arboreum_cottongen_reftransV1_0010388 vs. ExPASy TrEMBL
Match: U5GTA6_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0001s16291g PE=3 SV=1) HSP 1 Score: 679.478 bits (1752), Expect = 0.000e+0 Identity = 374/552 (67.75%), Postives = 438/552 (79.35%), Query Frame = 1 Query: 94 VDEAEERAFKRKTRRRXXXXXXXXXXXXXXXXXXXXGTLIHKRNNSSPDTASPT-ELTPAASLKAVCEVTQYPXXXXXXXXXXXXXNATDPEILFKLSLKVVIDELSGLSQYPKKLQAETNNTQVKHALDVCGTVFDDALDRLNDSATSLEVGDGESLLSDSKIDDLKTWLSTVITDQETCLDALEELNTTKNFNATLFEELKAAMQNSSEYASNSLAIAAKILGLLTNFRIPIHRRLLGFQKAAPSEFPAWVSPTERRLLQESKPTPNVIVAKDGSGHFRTINEAVQLVGKKNQSRFVIYVKEGKYVENVNLDKHRWNVMIYGDGKTKTIISGSRNXXXXXXXXXXXXXXXXXRGFIAKDIKFENTAGAAKHQAVAMRSGSDRSVFYSCAFDAYQDTLYAHSNRQFYRECDILGTID---------------FIFGNAAVVFQNCNIQPRQPLPNQFNTITAQGKKDPNQNTGISIQKCTITPFGNLTANTYLGRPWKEFSTTVIMQSNIGAFLNPVGWREWVTNVDPPSTILYAEYQNTGPGSTVDQRVK 1701 VDE E++AF+RKTR+RLII+V+S IVLLAVIIGAV G ++H RNN+S P ELTPAASLKAVC VT+YP+SCFSSIS++ + N TDPE LFKLSL V ++ELS L YP KL ++ ++ AL VC TVFDDA+DRLNDS +S+ VG+G +LS +K+DDLKTW+ST ITDQETCLDAL+ELN TK+FN TL + +KA M+NS+E+ SNSLAI AKILGLL++F IPIHRRLLGF++ S FP WV +RRLLQ S P P+V VAKD SG T+ EAV + KK++SRF+IYVKEG+Y+ENV LDK +WNVMIYGDGK KTIISGS NFVDGT TF TA+F VAG+ F A+DIKF NTAGA KHQAVA RSGSD SV + CAFD +QDTLYAHSNRQFYR+CDI GTID F+FGNAAVVFQNCNIQPRQPLPNQFNTITAQGKKDPNQNTGISIQ C + GN+TA TYLGRPWK++ST VIMQS+IG FL P GW WV+ VDPP+TI YAEYQNTGPG+ VD RVK Sbjct: 5 VDEVEQQAFRRKTRKRLIIVVVSSIVLLAVIIGAVIGVVLHNRNNNSSSNPVPPPELTPAASLKAVCSVTRYPTSCFSSISALETGNTTDPEELFKLSLHVAMNELSKLKDYPDKLIQSIDDATLQDALKVCATVFDDAVDRLNDSISSMAVGEGGKILSTAKMDDLKTWISTTITDQETCLDALQELNVTKHFNQTLVDHVKAEMENSTEFVSNSLAIVAKILGLLSDFNIPIHRRLLGFERTHNSRFPHWVGLGDRRLLQMSTPKPDVTVAKDDSGDCTTLREAVGKIPKKSKSRFIIYVKEGEYLENVILDKSKWNVMIYGDGKDKTIISGSLNFVDGTPTFSTASFAVAGKSFFARDIKFINTAGAEKHQAVAFRSGSDMSVLFRCAFDGFQDTLYAHSNRQFYRDCDITGTIDLSMFGSLPQPRSQTCFMFGNAAVVFQNCNIQPRQPLPNQFNTITAQGKKDPNQNTGISIQNCKFSASGNVTAPTYLGRPWKDYSTAVIMQSDIGPFLRPSGWMSWVSGVDPPATIFYAEYQNTGPGARVDGRVK 556
BLAST of g.arboreum_cottongen_reftransV1_0010388 vs. ExPASy TrEMBL
Match: A0A078F517_BRANA (Pectinesterase OS=Brassica napus GN=BnaA05g14120D PE=3 SV=1) HSP 1 Score: 676.011 bits (1743), Expect = 0.000e+0 Identity = 359/592 (60.64%), Postives = 456/592 (77.03%), Query Frame = 1 Query: 58 MDSIKSFKGYGKVDEAEERAFKRKTRRRXXXXXXXXXXXXXXXXXXXXGTLIHKRNNSS--PDTASPTELTPAASLKAVCEVTQYPXXXXXXXXXXXXXNATDPEILFKLSLKVVIDELSGLSQYPKKLQAETNNTQVKHALDVCGTVFDDALDRLNDSATSLEVGDGES--LLSDSKIDDLKTWLSTVITDQETCLDALEEL--NTTKNFNATLFEELKAAMQNSSEYASNSLAIAAKILGLLTNFRIPIH--RRLLGFQKAAPSEFPAWVSPTERRLLQESKPTPNVIVAKDGSGHFRTINEAVQLVGKKNQSRFVIYVKEGKYVENVNLDKHRWNVMIYGDGKTKTIISGSRNXXXXXXXXXXXXXXXXXRGFIAKDIKFENTAGAAKHQAVAMRSGSDRSVFYSCAFDAYQDTLYAHSNRQFYRECDILGTIDFIFGNAAVVFQNCNIQPRQPLPNQFNTITAQGKKDPNQNTGISIQKCTITPFGNLTANTYLGRPWKEFSTTVIMQSNIGAFLNPVGWREWVTNVDPPSTILYAEYQNTGPGSTVDQRVKWAGYRSTLSEADAGKFTVANFIQGEDWLPAATVAYE 1809 MDS+ SFKGYGKVDEA++ A K+KTR+RLI+L +S ++L+AVIIGAV GT++H +N +S P +SP ELTP+ SLK +C VT+YP SCF+SIS + SSN TDPE+LFKLSLKV+IDEL G+S P+KL ET + ++K AL VCG + +DALDRLND+ +S++ + S L+ S+I+DLKTWLS +TD ETC DA++EL N T+ N+T+ ++LK+AM +S+E+ASNSLAI +KIL +++F IPIH RRLL Q+ P W RRLLQ P+V VA DGSG T+NEAV +V KK+ FVIYVK G+YVENV +DK +WNVMIYGDGK KTII+G +NF+DGT T++TATF + G+GFI KDI NT+GAAKHQAVA RSGSD SV+Y C+FD +QDTLY HSNRQFYR CD+ GTIDFIFG+AAVVFQ+C I PRQPL NQFNTITAQGKKDPNQN+G+SIQ+CTI+ GN+TA TYLGRPWK+FSTTVIM++ IG + GW WV VDPP++I+Y EY+NTGPGS V RVKWAGY++ ++ +A KFTVA + G DW+PA V ++ Sbjct: 1 MDSVTSFKGYGKVDEAQDLALKKKTRKRLILLTVSGVILVAVIIGAVVGTVVHNKNKNSTEPTPSSPPELTPSTSLKTICSVTRYPESCFNSISKLPSSNTTDPEVLFKLSLKVIIDELDGISDLPEKLSTETEDERIKSALRVCGNLIEDALDRLNDTVSSMDASEDGSKKTLNSSRINDLKTWLSATVTDHETCFDAIDELATNNTEYANSTITKQLKSAMSSSTEFASNSLAIVSKILAAISDFGIPIHGRRRLLMSQQP-----PEWA---RRRLLQTEGLKPDVTVAADGSGDVTTVNEAVAMVPKKSLKMFVIYVKAGRYVENVVMDKGKWNVMIYGDGKDKTIIAGGKNFIDGTPTYETATFAIQGKGFIMKDIAIINTSGAAKHQAVAFRSGSDFSVYYQCSFDGFQDTLYPHSNRQFYRNCDVTGTIDFIFGSAAVVFQDCKIMPRQPLGNQFNTITAQGKKDPNQNSGMSIQRCTISANGNVTAPTYLGRPWKDFSTTVIMETEIGPVVKATGWMSWVNGVDPPASIVYGEYKNTGPGSDVAMRVKWAGYKAVMTADEAAKFTVATLLHGGDWIPATGVTHQ 584
BLAST of g.arboreum_cottongen_reftransV1_0010388 vs. ExPASy TrEMBL
Match: R0GVN4_9BRAS (Pectinesterase OS=Capsella rubella GN=CARUB_v10008670mg PE=3 SV=1) HSP 1 Score: 670.233 bits (1728), Expect = 0.000e+0 Identity = 356/589 (60.44%), Postives = 451/589 (76.57%), Query Frame = 1 Query: 58 MDSIKSFKGYGKVDEAEERAFKRKTRRRXXXXXXXXXXXXXXXXXXXXGTLIHKRNNSSPDTASPTELTPAASLKAVCEVTQYPXXXXXXXXXXXXXNATDPEILFKLSLKVVIDELSGLSQYPKKLQAETNNTQVKHALDVCGTVFDDALDRLNDSATSLEVGDGESLLSDSKIDDLKTWLSTVITDQETCLDALEEL--NTTKNFNATLFEELKAAMQNSSEYASNSLAIAAKILGLLTNFRIPIHRR--LLGFQKAAPSE-FPAWVSPTERRLLQESKPTPNVIVAKDGSGHFRTINEAVQLVGKKNQSRFVIYVKEGKYVENVNLDKHRWNVMIYGDGKTKTIISGSRNXXXXXXXXXXXXXXXXXRGFIAKDIKFENTAGAAKHQAVAMRSGSDRSVFYSCAFDAYQDTLYAHSNRQFYRECDILGTIDFIFGNAAVVFQNCNIQPRQPLPNQFNTITAQGKKDPNQNTGISIQKCTITPFGNLTANTYLGRPWKEFSTTVIMQSNIGAFLNPVGWREWVTNVDPPSTILYAEYQNTGPGSTVDQRVKWAGYRSTLSEADAGKFTVANFIQGEDWLPAATVAYE 1809 MDS+ SFKGYGKVDEA++ A K+KTR+R+++L IS++VL+AVII AV T++H +N+ S SP ELTP+ SLK +C VT++P SC SSIS + SSN TDPE LFKLSL+V+IDEL +S P+KL ET + ++K AL VCG + +DALDRLND+ ++++ + ++L S SKI+DLKTWLS +TD +TC D+L+EL N T+ N+T+ LK+AM NS+E+ SNSLAI +KIL L++ IPIHRR L+ SE F W RRLLQ P+V VA DG+G +T+NEAV +V KK+ FVIYVK G Y ENV +DK +WNVMIYGDGK KTIISGS+NF+DGT T++TATF + G+GF+ KDI NT+GA KHQAVA RSGSD SV+Y C+FD +QDTLY HSNRQFYR+CD+ GTIDFIFG+AAVVFQ C I PRQPLPNQFNTITAQGKKDPNQN+G+SIQ+CTI+ GN+ A TYLGRPWKEFSTTVIM++ IG + P+GW WV+ VDPP++I+Y EY+NTGPGS V QRVKWAGY+S +S+ DA KFTVA + G DW+PA V ++ Sbjct: 1 MDSVNSFKGYGKVDEAQDLALKKKTRKRILLLTISVVVLVAVIIAAVIATVVHNKNDESA-PGSPHELTPSTSLKTICSVTRFPESCISSISKLPSSNTTDPETLFKLSLRVIIDELDSISDLPEKLSKETEDERIKSALRVCGDLIEDALDRLNDTVSAIDDTEKKTL-SSSKIEDLKTWLSATVTDHDTCFDSLDELKQNKTEYANSTIIHNLKSAMGNSTEFTSNSLAIVSKILAALSDLGIPIHRRRRLMSHHHQQQSEDFEEWA---RRRLLQTEGAKPDVTVAADGTGDVKTVNEAVLMVPKKSLKMFVIYVKSGTYNENVVMDKSKWNVMIYGDGKGKTIISGSKNFIDGTPTYETATFAIQGKGFVMKDIGIINTSGATKHQAVAFRSGSDFSVYYQCSFDGFQDTLYPHSNRQFYRDCDVTGTIDFIFGSAAVVFQGCKIMPRQPLPNQFNTITAQGKKDPNQNSGMSIQRCTISANGNVIAPTYLGRPWKEFSTTVIMETEIGPVVRPIGWMSWVSGVDPPASIVYGEYKNTGPGSDVTQRVKWAGYKSVMSDEDAAKFTVATLLHGSDWIPATGVTHQ 584
BLAST of g.arboreum_cottongen_reftransV1_0010388 vs. ExPASy TrEMBL
Match: Q0WWC7_ARATH (Pectinesterase OS=Arabidopsis thaliana GN=At1g53840 PE=2 SV=1) HSP 1 Score: 669.848 bits (1727), Expect = 0.000e+0 Identity = 361/586 (61.60%), Postives = 450/586 (76.79%), Query Frame = 1 Query: 58 MDSIKSFKGYGKVDEAEERAFKRKTRRRXXXXXXXXXXXXXXXXXXXXGTLIHK-RNNSSPDTASPTELTPAASLKAVCEVTQYPXXXXXXXXXXXXXNATDPEILFKLSLKVVIDELSGLSQYPKKLQAETNNTQVKHALDVCGTVFDDALDRLNDSATSLEVGDGESLLSDSKIDDLKTWLSTVITDQETCLDALEEL--NTTKNFNATLFEELKAAMQNSSEYASNSLAIAAKILGLLTNFRIPIHRR--LLGFQKAAPSEFPAWVSPTERRLLQESKPTPNVIVAKDGSGHFRTINEAVQLVGKKNQSRFVIYVKEGKYVENVNLDKHRWNVMIYGDGKTKTIISGSRNXXXXXXXXXXXXXXXXXRGFIAKDIKFENTAGAAKHQAVAMRSGSDRSVFYSCAFDAYQDTLYAHSNRQFYRECDILGTIDFIFGNAAVVFQNCNIQPRQPLPNQFNTITAQGKKDPNQNTGISIQKCTITPFGNLTANTYLGRPWKEFSTTVIMQSNIGAFLNPVGWREWVTNVDPPSTILYAEYQNTGPGSTVDQRVKWAGYRSTLSEADAGKFTVANFIQGEDWLPAATV 1800 MDS+ SFKGYGKVDEA++ A K+KTR+RL++L IS++VL+AVII AV T++HK +N S+P + P ELTP+ SLKA+C VT++P SC SSIS + SSN TDPE LFKLSLKV+IDEL +S P+KL ET + ++K AL VCG + +DALDRLND+ ++++ + + LS SKI+DLKTWLS +TD ETC D+L+EL N T+ N+T+ + LK+AM S+E+ SNSLAI +KIL L++ IPIHRR L+ +F W RRLLQ + P+V VA DG+G T+NEAV V KK+ FVIYVK G YVENV +DK +WNVMIYGDGK KTIISGS+NFVDGT T++TATF + G+GFI KDI NTAGAAKHQAVA RSGSD SV+Y C+FD +QDTLY HSNRQFYR+CD+ GTIDFIFG+AAVVFQ C I PRQPL NQFNTITAQGKKDPNQ++G+SIQ+CTI+ GN+ A TYLGRPWKEFSTTVIM++ IGA + P GW WV+ VDPP++I+Y EY+NTGPGS V QRVKWAGY+ +S+A+A KFTVA + G DW+PA V Sbjct: 1 MDSVNSFKGYGKVDEAQDLALKKKTRKRLLLLSISVVVLIAVIIAAVVATVVHKNKNESTP--SPPPELTPSTSLKAICSVTRFPESCISSISKLPSSNTTDPETLFKLSLKVIIDELDSISDLPEKLSKETEDERIKSALRVCGDLIEDALDRLNDTVSAIDDEEKKKTLSSSKIEDLKTWLSATVTDHETCFDSLDELKQNKTEYANSTITQNLKSAMSRSTEFTSNSLAIVSKILSALSDLGIPIHRRRRLMSHHHQQSVDFEKWA---RRRLLQTAGLKPDVTVAGDGTGDVLTVNEAVAKVPKKSLKMFVIYVKSGTYVENVVMDKSKWNVMIYGDGKGKTIISGSKNFVDGTPTYETATFAIQGKGFIMKDIGIINTAGAAKHQAVAFRSGSDFSVYYQCSFDGFQDTLYPHSNRQFYRDCDVTGTIDFIFGSAAVVFQGCKIMPRQPLSNQFNTITAQGKKDPNQSSGMSIQRCTISANGNVIAPTYLGRPWKEFSTTVIMETVIGAVVRPSGWMSWVSGVDPPASIVYGEYKNTGPGSDVTQRVKWAGYKPVMSDAEAAKFTVATLLHGADWIPATGV 581
BLAST of g.arboreum_cottongen_reftransV1_0010388 vs. ExPASy TrEMBL
Match: Q8LA06_ARATH (Pectinesterase OS=Arabidopsis thaliana PE=2 SV=1) HSP 1 Score: 669.463 bits (1726), Expect = 0.000e+0 Identity = 361/586 (61.60%), Postives = 450/586 (76.79%), Query Frame = 1 Query: 58 MDSIKSFKGYGKVDEAEERAFKRKTRRRXXXXXXXXXXXXXXXXXXXXGTLIHK-RNNSSPDTASPTELTPAASLKAVCEVTQYPXXXXXXXXXXXXXNATDPEILFKLSLKVVIDELSGLSQYPKKLQAETNNTQVKHALDVCGTVFDDALDRLNDSATSLEVGDGESLLSDSKIDDLKTWLSTVITDQETCLDALEEL--NTTKNFNATLFEELKAAMQNSSEYASNSLAIAAKILGLLTNFRIPIHRR--LLGFQKAAPSEFPAWVSPTERRLLQESKPTPNVIVAKDGSGHFRTINEAVQLVGKKNQSRFVIYVKEGKYVENVNLDKHRWNVMIYGDGKTKTIISGSRNXXXXXXXXXXXXXXXXXRGFIAKDIKFENTAGAAKHQAVAMRSGSDRSVFYSCAFDAYQDTLYAHSNRQFYRECDILGTIDFIFGNAAVVFQNCNIQPRQPLPNQFNTITAQGKKDPNQNTGISIQKCTITPFGNLTANTYLGRPWKEFSTTVIMQSNIGAFLNPVGWREWVTNVDPPSTILYAEYQNTGPGSTVDQRVKWAGYRSTLSEADAGKFTVANFIQGEDWLPAATV 1800 MDS+ SFKGYGKVDEA++ A K+KTR+RL++L IS++VL+AVII AV T++HK +N S+P + P ELTP+ SLKA+C VT++P SC SSIS + SSN TDPE LFKLSLKV+IDEL +S P+KL ET + ++K AL VCG + +DALDRLND+ ++++ + + LS SKI+DLKTWLS +TD ETC D+L+EL N T+ N+T+ + LK+AM S+E+ SNSLAI +KIL L++ IPIHRR L+ +F W RRLLQ + P+V VA DG+G T+NEAV V KK+ FVIYVK G YVENV +DK +WNVMIYGDGK KTIISGS+NFVDGT T++TATF + G+GFI KDI NTAGAAKHQAVA RSGSD SV+Y C+FD +QDTLY HSNRQFYR+CD+ GTIDFIFG+AAVVFQ C I PRQPL NQFNTITAQGKKDPNQ++G+SIQ+CTI+ GN+ A TYLGRPWKEFSTTVIM++ IGA + P GW WV+ VDPP++I+Y EY+NTGPGS V QRVKWAGY+ +S+A+A KFTVA + G DW+PA V Sbjct: 1 MDSVNSFKGYGKVDEAQDLALKKKTRKRLLLLSISVVVLIAVIIAAVVATVVHKNKNESTP--SPPPELTPSTSLKAICSVTRFPESCISSISKLPSSNTTDPETLFKLSLKVIIDELDSISDLPEKLSKETEDERIKSALRVCGDLIEDALDRLNDTVSAIDDEEKKKTLSSSKIEDLKTWLSATVTDHETCFDSLDELKQNKTEYANSTITQNLKSAMSRSTEFTSNSLAIVSKILSALSDLGIPIHRRRRLMSHHHQQSVDFEKWA---RRRLLQTAGLKPDVTVAGDGTGDVLTVNEAVAKVPKKSLKMFVIYVKSGTYVENVVMDKSKWNVMIYGDGKGKTIISGSKNFVDGTPTYETATFAIQGKGFIMKDIGIINTAGAAKHQAVAFRSGSDFSVYYQCSFDGFQDTLYPHSNRQFYRDCDVTGTIDFIFGSAAVVFQGCKIMPRQPLSNQFNTITAQGKKDPNQSSGMSIQRCTISTNGNVIAPTYLGRPWKEFSTTVIMETVIGAVVRPSGWMSWVSGVDPPASIVYGEYKNTGPGSDVTQRVKWAGYKPVMSDAEAAKFTVATLLHGADWIPATGV 581
BLAST of g.arboreum_cottongen_reftransV1_0010388 vs. ExPASy Swiss-Prot
Match: PME3_PHAVU (Pectinesterase 3 OS=Phaseolus vulgaris GN=MPE3 PE=2 SV=1) HSP 1 Score: 704.901 bits (1818), Expect = 0.000e+0 Identity = 387/595 (65.04%), Postives = 477/595 (80.17%), Query Frame = 1 Query: 58 MDSIKSFKGYGKVDEAEERAFKRKTRRRXXXXXXXXXXXXXXXXXXXXGTLIHKRNNSSPDTASP---TELTPAASLKAVCEVTQYPXXXXXXXXXXXXXNATDPEILFKLSLKVVIDELSGLSQYPKKLQAET-NNTQVKHALDVCGTVFDDALDRLNDSATSLEVGDGESLLSDSKIDDLKTWLSTVITDQETCLDALEELNTTKNFNATLFEELKAAMQNSSEYASNSLAIAAKILGLLTNFRIPIH-RRLLGFQKAAPSEFPAWVSPTERRLLQE--SKPTPNVIVAKDGSGHFRTINEAVQLVGKKNQSRFVIYVKEGKYVENVNLDKHRWNVMIYGDGKTKTIISGSRNXXXXXXXXXXXXXXXXXRGFIAKDIKFENTAGAAKHQAVAMRSGSDRSVFYSCAFDAYQDTLYAHSNRQFYRECDILGTIDFIFGNAAVVFQNCNIQPRQPLPNQFNTITAQGKKDPNQNTGISIQKCTITPFG-NLTANTYLGRPWKEFSTTVIMQSNIGAFLNPVGWREWVTNVDPPSTILYAEYQNTGPGSTVDQRVKWAGYRSTLSEADAGKFTVANFIQGEDWLPAATVAYEPAL 1818 MD+IKSFKGYGKV+E E++A+++KTR+RLII+ +S IVL+AVII AVAG +IH RN+ S ++ TEL+PAASLKAVC+ T+YPSSCFSSISS+ SN TDPE+LFKLSL+V IDELS +P KL+A + +++ A+DVC +VF DALDRLNDS ++L G + S + + +++TWLS +TDQ+TCLDA+ ELN+T A +E++ AM+NS+E+ASNSLAI KILGLL+ F PIH RRLLGF P W+ ERRLL+E + TP+ +VAKDGSG F+TI EA++LV KK++ RF +YVKEG+YVEN++LDK+ WNVMIYGDGK KT + GSRNF+DGT TF+TATF V G+GFIAKDI F N AGA+KHQAVA+RSGSDRSVF+ C+FD +QDTLYAHSNRQFYR+CDI GTIDFIFGNAAVVFQ+C I PRQPLPNQFNTITAQGKKDPNQNTGI IQK TITPFG NLTA TYLGRPWK+FSTTVIMQS+IGA LNPVGW WV NV+PP+TI YAEYQN+GPG+ V QRVKWAGY+ T+++ +A +FTV +FIQG +WLP A V ++ L Sbjct: 1 MDTIKSFKGYGKVNELEQQAYEKKTRKRLIIIAVSSIVLIAVIIAAVAGVVIHNRNSESSPSSDSVPQTELSPAASLKAVCDTTRYPSSCFSSISSLPESNTTDPELLFKLSLRVAIDELS---SFPSKLRANAEQDARLQKAIDVCSSVFGDALDRLNDSISALGTVAGR-IASSASVSNVETWLSAALTDQDTCLDAVGELNSTAARGA--LQEIETAMRNSTEFASNSLAIVTKILGLLSRFETPIHHRRLLGF--------PEWLGAAERRLLEEKNNDSTPDAVVAKDGSGQFKTIGEALKLVKKKSEERFSVYVKEGRYVENIDLDKNTWNVMIYGDGKDKTFVVGSRNFMDGTPTFETATFAVKGKGFIAKDIGFVNNAGASKHQAVALRSGSDRSVFFRCSFDGFQDTLYAHSNRQFYRDCDITGTIDFIFGNAAVVFQSCKIMPRQPLPNQFNTITAQGKKDPNQNTGIIIQKSTITPFGNNLTAPTYLGRPWKDFSTTVIMQSDIGALLNPVGWMSWVPNVEPPTTIFYAEYQNSGPGADVSQRVKWAGYKPTITDRNAEEFTVQSFIQGPEWLPNAAVQFDSTL 581
BLAST of g.arboreum_cottongen_reftransV1_0010388 vs. ExPASy Swiss-Prot
Match: PME1_ARATH (Pectinesterase 1 OS=Arabidopsis thaliana GN=PME1 PE=1 SV=1) HSP 1 Score: 669.848 bits (1727), Expect = 0.000e+0 Identity = 361/586 (61.60%), Postives = 450/586 (76.79%), Query Frame = 1 Query: 58 MDSIKSFKGYGKVDEAEERAFKRKTRRRXXXXXXXXXXXXXXXXXXXXGTLIHK-RNNSSPDTASPTELTPAASLKAVCEVTQYPXXXXXXXXXXXXXNATDPEILFKLSLKVVIDELSGLSQYPKKLQAETNNTQVKHALDVCGTVFDDALDRLNDSATSLEVGDGESLLSDSKIDDLKTWLSTVITDQETCLDALEEL--NTTKNFNATLFEELKAAMQNSSEYASNSLAIAAKILGLLTNFRIPIHRR--LLGFQKAAPSEFPAWVSPTERRLLQESKPTPNVIVAKDGSGHFRTINEAVQLVGKKNQSRFVIYVKEGKYVENVNLDKHRWNVMIYGDGKTKTIISGSRNXXXXXXXXXXXXXXXXXRGFIAKDIKFENTAGAAKHQAVAMRSGSDRSVFYSCAFDAYQDTLYAHSNRQFYRECDILGTIDFIFGNAAVVFQNCNIQPRQPLPNQFNTITAQGKKDPNQNTGISIQKCTITPFGNLTANTYLGRPWKEFSTTVIMQSNIGAFLNPVGWREWVTNVDPPSTILYAEYQNTGPGSTVDQRVKWAGYRSTLSEADAGKFTVANFIQGEDWLPAATV 1800 MDS+ SFKGYGKVDEA++ A K+KTR+RL++L IS++VL+AVII AV T++HK +N S+P + P ELTP+ SLKA+C VT++P SC SSIS + SSN TDPE LFKLSLKV+IDEL +S P+KL ET + ++K AL VCG + +DALDRLND+ ++++ + + LS SKI+DLKTWLS +TD ETC D+L+EL N T+ N+T+ + LK+AM S+E+ SNSLAI +KIL L++ IPIHRR L+ +F W RRLLQ + P+V VA DG+G T+NEAV V KK+ FVIYVK G YVENV +DK +WNVMIYGDGK KTIISGS+NFVDGT T++TATF + G+GFI KDI NTAGAAKHQAVA RSGSD SV+Y C+FD +QDTLY HSNRQFYR+CD+ GTIDFIFG+AAVVFQ C I PRQPL NQFNTITAQGKKDPNQ++G+SIQ+CTI+ GN+ A TYLGRPWKEFSTTVIM++ IGA + P GW WV+ VDPP++I+Y EY+NTGPGS V QRVKWAGY+ +S+A+A KFTVA + G DW+PA V Sbjct: 1 MDSVNSFKGYGKVDEAQDLALKKKTRKRLLLLSISVVVLIAVIIAAVVATVVHKNKNESTP--SPPPELTPSTSLKAICSVTRFPESCISSISKLPSSNTTDPETLFKLSLKVIIDELDSISDLPEKLSKETEDERIKSALRVCGDLIEDALDRLNDTVSAIDDEEKKKTLSSSKIEDLKTWLSATVTDHETCFDSLDELKQNKTEYANSTITQNLKSAMSRSTEFTSNSLAIVSKILSALSDLGIPIHRRRRLMSHHHQQSVDFEKWA---RRRLLQTAGLKPDVTVAGDGTGDVLTVNEAVAKVPKKSLKMFVIYVKSGTYVENVVMDKSKWNVMIYGDGKGKTIISGSKNFVDGTPTYETATFAIQGKGFIMKDIGIINTAGAAKHQAVAFRSGSDFSVYYQCSFDGFQDTLYPHSNRQFYRDCDVTGTIDFIFGSAAVVFQGCKIMPRQPLSNQFNTITAQGKKDPNQSSGMSIQRCTISANGNVIAPTYLGRPWKEFSTTVIMETVIGAVVRPSGWMSWVSGVDPPASIVYGEYKNTGPGSDVTQRVKWAGYKPVMSDAEAAKFTVATLLHGADWIPATGV 581
BLAST of g.arboreum_cottongen_reftransV1_0010388 vs. ExPASy Swiss-Prot
Match: PME26_ARATH (Putative pectinesterase/pectinesterase inhibitor 26 OS=Arabidopsis thaliana GN=PME26 PE=2 SV=1) HSP 1 Score: 562.377 bits (1448), Expect = 0.000e+0 Identity = 301/541 (55.64%), Postives = 381/541 (70.43%), Query Frame = 1 Query: 211 IHKRNN-SSPDTASPTELTPAASLKAVCEVTQYPXXXXXXXXXX-XXXNATDPEILFKLSLKVVIDELSGLSQYPKKLQAETNNTQVKHALDVCGTVFDDALDRLNDSATSLE--VGDGESLLSDSKIDDLKTWLSTVITDQETCLDALEELNTTKNFNATLFEELKAAMQNSSEYASNSLAIAAKILGLLTNFRIPIH-RRLLGFQKAAPSEFPAWVSPTERRLLQESKPTPNVIVAKDGSGHFRTINEAVQLVGKKNQSRFVIYVKEGKYVENVNLDKHRWNVMIYGDGKTKTIISGSRNXXXXXXXXXXXXXXXXXRGFIAKDIKFENTAGAAKHQAVAMRSGSDRSVFYSCAFDAYQDTLYAHSNRQFYRECDILGTIDFIFGNAAVVFQNCNIQPRQPLPNQFNTITAQGKKDPNQNTGISIQKCTITPFGNLTANTYLGRPWKEFSTTVIMQSNIGAFLNPVGWREWVTNVD-PPSTILYAEYQNTGPGSTVDQRVKWAGYRSTLSEADAGKFTVANFIQGED-WLPAATVAYEP 1812 IH+R+ SP TP++ L+ VC VT YP+SC SSIS + S TDP++LF+LSL+V DEL+ + PKKL ETN+ +K AL VC VFD A+D +ND+ +SL+ + G+ L+ S I DL TWLS+ +TD TC D L+E N+N+ + ++LK+AM NS+E+ SNSLAI A++L + RIP+ RRLL + FP WV P RRLLQ TP+V VA DGSG RT+NEAV V KK ++ FVIYVK G YVENV + K +WNV IYGDG+ KTIISGS N VDG TF+T+TF G+GF+ KD+ NTAG KHQAVA RS SDRSV+Y C+FD YQDTLY HSNRQ+YR CD+ GT+DFIFG VVFQ C+I+PRQPLPNQFNTITA+G ++ NQNTGISI +CTI+P GN+TA TYLGRPWK FS TVIMQS IG+F+NP GW W + D PP TI Y EY+N+GPGS + +RVKWAGY+ S+ +A +FTV F++G+D W+P A + P Sbjct: 436 IHERHGVQSPRLRKSPHPTPSSVLRTVCNVTNYPASCISSISKLPLSKTTTDPKVLFRLSLQVTFDELNSIVGLPKKLAEETNDEGLKSALSVCADVFDLAVDSVNDTISSLDEVISGGKKNLNSSTIGDLITWLSSAVTDIGTCGDTLDE----DNYNSPIPQKLKSAMVNSTEFTSNSLAIVAQVLKKPSKSRIPVQGRRLLN-----SNSFPNWVRPGVRRLLQAKNLTPHVTVAADGSGDVRTVNEAVWRVPKKGKTMFVIYVKAGTYVENVLMKKDKWNVFIYGDGRDKTIISGSTNMVDGVRTFNTSTFATEGKGFMMKDMGIINTAGPEKHQAVAFRSDSDRSVYYRCSFDGYQDTLYTHSNRQYYRNCDVTGTVDFIFGAGTVVFQGCSIRPRQPLPNQFNTITAEGTQEANQNTGISIHQCTISPNGNVTATTYLGRPWKLFSKTVIMQSVIGSFVNPAGWIAWNSTYDPPPRTIFYREYKNSGPGSDLSKRVKWAGYKPISSDDEAARFTVKYFLRGDDNWIPKAVMGMPP 967 HSP 2 Score: 219.164 bits (557), Expect = 2.474e-59 Identity = 138/266 (51.88%), Postives = 186/266 (69.92%), Query Frame = 1 Query: 58 MDSIKSF-KGYGKVDEAEERAFKRKTRRRXXXXXXXXXXXXXXXXXXXXGTLIHKR--NNSSPDTASPTELTPAASLKAVCEVTQYPXXXXXXXXXXXXXNATDPEILFKLSLKVVIDELSGLSQYPKKLQAETNNTQVKHALDVCGTVFDDALDRLNDSATSLEVGDGESLLSDSKIDDLKTWLSTVITDQETCLDALEELNTTKNFNATLFEELKAAMQNSSEYASNSLAIAAKILGLLTNFRIPIH-RRLLGFQ-KAAPSEFP 840 MD++KS KGYGKVDE ++ A KRKTR+RL + IS+ VL+A+II + IH R N+ P +S ELTPAASLK VC VT YP SCFSSIS + SN TDPE++F+LSL+VVIDEL+ + + PKKL ET++ +K AL VC + D A+DR+N++ +++EV DG+ +L+ + IDDL TWLS +T TCLDAL+E++ T N+ + +LK+ M NS+E+ SNSLAI AKIL +++F IPIH RRLL A P P Sbjct: 1 MDTVKSINKGYGKVDETQDLALKRKTRKRLYQIGISVAVLVAIIISSTVTIAIHSRKGNSPHPTPSSVPELTPAASLKTVCSVTNYPVSCFSSISKLPLSNTTDPEVIFRLSLQVVIDELNSIVELPKKLAEETDDEGLKSALSVCEHLLDLAIDRVNETVSAMEVVDGKKILNAATIDDLLTWLSAAVTYHGTCLDALDEISHT---NSAIPLKLKSGMVNSTEFTSNSLAIVAKILSTISDFGIPIHGRRLLNSSPHATPISVP 263 HSP 3 Score: 177.178 bits (448), Expect = 4.138e-45 Identity = 117/243 (48.15%), Postives = 160/243 (65.84%), Query Frame = 1 Query: 202 GTLIHKRN--NSSPDTASPT---ELTPAASLKAVCEVTQYPXXXXXXXXXXXXXNATDPEILFKLSLKVVIDELSGLSQYPKKLQAETNNTQVKHALDVCGTVFDDALDRLNDSATSL-EVGDGESLLSDSKIDDLKTWLSTVITDQETCLDALEEL--NTTKNFNATLFEELKAAMQNSSEYASNSLAIAAKILGLLTNFRIPIHRRLLGFQKAAPSEFPAWVSPTERRLLQESKPTPNVIV 906 G IH R NSSP A+P +LTPAASL+ VC VT+YP+SC SSIS + SSN TDPE LF+LSL+VVI+EL+ ++ PKKL ET++ ++K +L VCG VF+DA+D +ND+ +++ EVGDG+ +L S ID+++TWLS +TD +TCLDAL+EL N T+ N+ + +LK+AM NS ++ SNSLAI AK PIH R G Q SP RL + PTP+ ++ Sbjct: 242 GIPIHGRRLLNSSPH-ATPISVPKLTPAASLRNVCSVTRYPASCVSSISKLPSSNTTDPEALFRLSLQVVINELNSIAGLPKKLAEETDDERLKSSLSVCGDVFNDAIDIVNDTISTMEEVGDGKKILKSSTIDEIQTWLSAAVTDHDTCLDALDELSQNKTEYANSPISLKLKSAMVNSRKFTSNSLAIIAK---------FPIHER-HGVQ-----------SP---RLRKSPHPTPSSVL 459
BLAST of g.arboreum_cottongen_reftransV1_0010388 vs. ExPASy Swiss-Prot
Match: PME46_ARATH (Probable pectinesterase/pectinesterase inhibitor 46 OS=Arabidopsis thaliana GN=PME46 PE=2 SV=1) HSP 1 Score: 444.506 bits (1142), Expect = 1.595e-146 Identity = 282/585 (48.21%), Postives = 381/585 (65.13%), Query Frame = 1 Query: 85 YGKVDEAEERAFK--RKTRRRXXXXXXXXXXXXXXXXXXXXGTLIHKRNNSSPDTASPTELTPAASLKAVCEVTQYPXXXXXXXXXXXXXNATDPEILFKLSLKVVIDELSGLSQYPKKLQAETNNTQVKHA----LDVCGTVFDDALDRLNDSATSLEVGDGESLLSDSKIDDLKTWLSTVITDQETCLDALEELNTTKNFNATLFEELKAAMQNSSEYASNSLAIAAKILGLLTNFRIPIHRRLL--GFQKAAPSEFPAWVSPTERRLLQES--KPTPNVIVAKDGSGHFRTINEAVQLVGKKNQSRFVIYVKEGKYVENVNLDKHRWNVMIYGDGKTKTIISGSRNXXXXXXXXXXXXXXXXXRGFIAKDIKFENTAGAAKHQAVAMRSGSDRSVFYSCAFDAYQDTLYAHSNRQFYRECDILGTIDFIFGNAAVVFQNCNIQPRQPLPNQFNTITAQGKKDPNQNTGISIQKCTITPFGNLT-ANTYLGRPWKEFSTTVIMQSNIGAFLNPVGWREWVTNVDPPSTILYAEYQNTGPGSTVDQRVKWAGYRSTLSEADAGKFTVANFIQGEDWLPAATVAY 1806 YG++DE E+ + RKT++R+ I+ IS IVL+ +++GAV GT + N+ P T + E + S+KA+C+VT + CF ++ S +++ + PE LFK ++KV I ELS K L +N + +A + C + A+D+LN++ TS S DDL+TWLS+V T QETC+DAL E N + T F E ++NS+E SN+LAI LG + + RRLL G K ++ P RRLL+ K ++VAKDGSG +RTI EA+ V +KN+ +IYVK+G Y+ENV ++K +WNV++ GDG++KTI+S NF+DGT TF+TATF V G+GF+A+D+ F NTAG AKHQAVA+ +D SVFY C DA+QDT+YAH+ RQFYR+C ILGT+DFIFGNAAVVFQ C I PR+P+ Q NTITAQG+KDPNQNTGISI CTI P NLT T+LGRPWK+FSTTVIM+S + F+NP GW W T P TI YAEY N+GPG++ RVKW G +++L++ +A KFTV FI G +WLPA V + Sbjct: 4 YGRLDEHEQAKLEASRKTKKRIAIIAISSIVLVCIVVGAVVGT-TARDNSKKPPTENNGEPI-SVSVKALCDVTLHKEKCFETLGSAPNASRSSPEELFKYAVKVTITELS------KVLDGFSNGEHMDNATSAAMGACVELIGLAVDQLNETMTS----------SLKNFDDLRTWLSSVGTYQETCMDALVEANKP---SLTTFGE--NHLKNSTEMTSNALAIIT-WLGKIADTVKFRRRRLLETGNAKVVVADLPMMEG---RRLLESGDLKKKATIVVAKDGSGKYRTIGEALAEVEEKNEKPTIIYVKKGVYLENVRVEKTKWNVVMVGDGQSKTIVSAGLNFIDGTPTFETATFAVFGKGFMARDMGFINTAGPAKHQAVALMVSADLSVFYKCTMDAFQDTMYAHAQRQFYRDCVILGTVDFIFGNAAVVFQKCEILPRRPMKGQQNTITAQGRKDPNQNTGISIHNCTIKPLDNLTDIQTFLGRPWKDFSTTVIMKSFMDKFINPKGWLPW-TGDTAPDTIFYAEYLNSGPGASTKNRVKWQGLKTSLTKKEANKFTVKPFIDGNNWLPATKVPF 560
BLAST of g.arboreum_cottongen_reftransV1_0010388 vs. ExPASy Swiss-Prot
Match: PME24_ARATH (Putative pectinesterase/pectinesterase inhibitor 24 OS=Arabidopsis thaliana GN=PME24 PE=3 SV=1) HSP 1 Score: 425.631 bits (1093), Expect = 3.476e-139 Identity = 261/584 (44.69%), Postives = 373/584 (63.87%), Query Frame = 1 Query: 85 YGKVDEAEERAF--KRKTRRRXXXXXXXXXXXXXXXXXXXXGTLIHKRNNSSPDTASPTELTPAASLKAVCEVTQYPXXXXXXXXXXXXXNATDPEILFKLSLKVVIDELS-GLSQYPKKLQAETNNTQVKHALDVCGTVFDDALDRLNDSATSLEVGDGESLLSDSKIDDLKTWLSTVITDQETCLDALEELNTTKNFNATLFEELKAAMQNSSEYASNSLAIAAKILGLLTNFRIPIHRRLLGFQKAAPSEFPAWVSPTERRLLQES--KPTPNVIVAKDGSGHFRTINEAVQLVGKKNQSRFVIYVKEGKYVENVNLDKHRWNVMIYGDGKTKTIISGSRNXXXXXXXXXXXXXXXXXRGFIAKDIKFENTAGAAKHQAVAMRSGSDRSVFYSCAFDAYQDTLYAHSNRQFYRECDILGTIDFIFGNAAVVFQNCNIQPRQPLPNQFNTITAQGKKDPNQNTGISIQKCTITPFGNLT-ANTYLGRPWKEFSTTVIMQSNIGAFLNPVGWREWVTNVDPPSTILYAEYQNTGPGSTVDQRVKWAGYRSTLSEADAGKFTVANFIQGEDWLPAATVAYEPAL 1818 YGKVDE E +RKTR+ + I+ +S+++L ++IGAV GT+ HK++ + +T + + + + S+KAVC+VT + CF ++ S ++++ +PE LF+ ++K+ I E+S ++ + L E NN ++ C + D +D LN++ TS GD + +DDL+TWLS+ T Q TC++ L + F E + ++NS+E SN+LAI + + +F++ RRLL +F A RRLLQ + + +++VAKDGSG +RTI A+Q V +K++ R +IYVK+G Y ENV ++K WNV++ GDG++K+I+SG N +DGT TF TATF V G+GF+A+D+ F NTAG +KHQAVA+ +D + FY C +AYQDTLY H+ RQFYREC I+GT+DFIFGN+A V Q+C I PR+P+ Q NTITAQG+ DPN NTGISI +C I+P G+LT T+LGRPWK FSTTVIM S + F++ GW W T P TI Y EY+NTGPG++ RVKW G R LS +A +FTV FI G WLPA V + L Sbjct: 5 YGKVDEREHVRLEARRKTRKNIAIIAVSLVILAGIVIGAVFGTMAHKKSPETVETNNNGD-SISVSVKAVCDVTLHKEKCFETLGSAPNASSLNPEELFRYAVKITIAEVSKAINAFSSSLGDEKNNI----TMNACAELLDLTIDNLNNTLTSSSNGD---VTVPELVDDLRTWLSSAGTYQRTCVETLAP-------DMRPFGE--SHLKNSTELTSNALAIITWLGKIADSFKL--RRRLLT-TADVEVDFHA-----GRRLLQSTDLRKVADIVVAKDGSGKYRTIKRALQDVPEKSEKRTIIYVKKGVYFENVKVEKKMWNVIVVGDGESKSIVSGRLNVIDGTPTFKTATFAVFGKGFMARDMGFINTAGPSKHQAVALMVSADLTAFYRCTMNAYQDTLYVHAQRQFYRECTIIGTVDFIFGNSASVLQSCRILPRRPMKGQQNTITAQGRTDPNMNTGISIHRCNISPLGDLTDVMTFLGRPWKNFSTTVIMDSYLHGFIDRKGWLPW-TGDSAPDTIFYGEYKNTGPGASTKNRVKWKGLR-FLSTKEANRFTVKPFIDGGRWLPATKVPFRSGL 561
BLAST of g.arboreum_cottongen_reftransV1_0010388 vs. ExPASy Swiss-Prot
Match: PME21_ARATH (Probable pectinesterase/pectinesterase inhibitor 21 OS=Arabidopsis thaliana GN=PME21 PE=2 SV=2) HSP 1 Score: 398.282 bits (1022), Expect = 2.394e-127 Identity = 228/526 (43.35%), Postives = 316/526 (60.08%), Query Frame = 1 Query: 274 SLKAVCEVTQYPXXXXXXXXXXXXXNATDPEILFKLSLKVVIDELSGLSQYPKKLQAETNNTQVKHALDVCGTVFDDALDRLNDSATSLEVGDGESLLSDSKIDDLKTWLSTVITDQETCLDALEELNTTKNFNATLFEELKAAMQNSSEYASNSLAIAAKILGLLTNFRIPI--HRRLLGFQKAAPSEFPAWVSPTERRLLQE----SKPTPNVIVAKDGSGHFRTINEAVQLVGKKNQSRFVIYVKEGKYVENVNLDKHRWNVMIYGDGKTKTIISGSRNXXXXXXXXXXXXXXXXXRGFIAKDIKFENTAGAAKHQAVAMRSGSDRSVFYSCAFDAYQDTLYAHSNRQFYRECDILGTIDFIFGNAAVVFQNCNIQPRQPLPNQFNTITAQGKKDPNQNTGISIQKCTITPFGNL-----TANTYLGRPWKEFSTTVIMQSNIGAFLNPVGWREWVTNVDPPSTILYAEYQNTGPGSTVDQRVKWAGYRSTLSEADAGKFTVANFIQGEDWLPAATVAYEPAL 1818 ++K VC T Y N TDP L K + V + +++ ++ + + +++ + ALD C + D ALD L++S E+G E L D + +L+ WLS I+ +ETCL+ + T N T+ + LK A+ E N LAI +++ + +IP RRLL FP+WV R+LLQ S P+++VA+DGSG ++TINEA+Q V KK + FV+++K G Y E V ++K +++ GDG KTIISG++N+ DG T+ TAT + G FIAK+I FENTAGA KHQAVA+R SD S+F++C FD YQDTLY HS+RQF+R+C I GTIDF+FG+AA VFQNC + R+PLPNQ ITA G+KDP ++TG Q CTI + T+ YLGRPWKE+S T+IM + I F+ P GW+ W+ + T+ Y+E QNTGPGS + RV WAG + TLSE D KFT A +IQG+DW+P V Y L Sbjct: 57 AVKDVCAPTDY-RKTCEDTLIKNGKNTTDPMELVKTAFNVTMKQITDAAKKSQTIMELQKDSRTRMALDQCKELMDYALDELSNSFE--ELGKFEFHLLDEALINLRIWLSAAISHEETCLEGFQ--GTQGNAGETMKKALKTAI----ELTHNGLAIISEMSNFVGQMQIPGLNSRRLLA------EGFPSWVDQRGRKLLQAAAAYSDVKPDIVVAQDGSGQYKTINEALQFVPKKRNTTFVVHIKAGLYKEYVQVNKTMSHLVFIGDGPDKTIISGNKNYKDGITTYRTATVAIVGNYFIAKNIGFENTAGAIKHQAVAVRVQSDESIFFNCRFDGYQDTLYTHSHRQFFRDCTISGTIDFLFGDAAAVFQNCTLLVRKPLPNQACPITAHGRKDPRESTGFVFQGCTIAGEPDYLAVKETSKAYLGRPWKEYSRTIIMNTFIPDFVQPQGWQPWLGDFG-LKTLFYSEVQNTGPGSALANRVTWAGIK-TLSEEDILKFTPAQYIQGDDWIPGKGVPYTTGL 565
BLAST of g.arboreum_cottongen_reftransV1_0010388 vs. ExPASy Swiss-Prot
Match: PME34_ARATH (Probable pectinesterase/pectinesterase inhibitor 34 OS=Arabidopsis thaliana GN=PME34 PE=2 SV=1) HSP 1 Score: 379.793 bits (974), Expect = 4.253e-121 Identity = 229/544 (42.10%), Postives = 318/544 (58.46%), Query Frame = 1 Query: 217 KRNNSSPDTASPTELTPAASLKAVCEVTQYPXXXXXXXXXX-XXXNATDPEILFKLSLKVVIDELSGLSQYPKKLQAETNNTQVKHALDVCGTVFDDALDRLNDSATSLEVGDGESLLSDSKIDDLKTWLSTVITDQETCLDALEELNTTKNFNATLFEELKAAMQNSSEYASNSLAIAAKILGLLTNFRIPIH-RRLLGFQKAAPSEFPAWVSPTERRLLQE--SKPTPNVIVAKDGSGHFRTINEAVQLVGKKNQSRFVIYVKEGKYVEN-VNLDKHRWNVMIYGDGKTKTIISGSRNXXXXXXXXXXXXXXXXXRGFIAKDIKFENTAGAAKHQAVAMRSGSDRSVFYSCAFDAYQDTLYAHSNRQFYRECDILGTIDFIFGNAAVVFQNCNIQPRQPLPNQFNTITAQGKKDPNQNTGISIQKCTITPFGNLTA-----NTYLGRPWKEFSTTVIMQSNIGAFLNPVGWREWVTNVDPPSTILYAEYQNTGPGSTVDQRVKWAGYRSTLSEADAGKFTVANFIQGEDWLPAATVAYEPAL 1818 K N S P A P+ ++ CE+T++P C S+ S A+ + L +++ + + S L + + A D C + DD++D L+ + +S+ S +K D+ TWLS +T+ +TC + + ++ + + + + AA+QN SE SN LAI + +PI RRLLG ++ +FP W+ P ER +L+ S+ ++IV+KDG+G +TI+EA++ + + R +IYVK G+Y EN + + + + N+M GDGK KT+ISG ++ D TF TA+F G GFIA+DI FEN AG AKHQAVA+R G+D +V Y C YQDTLY HSNRQF+RECDI GT+DFIFGNAAVV QNC+I R+P+ Q NTITAQ +KDPNQNTGISI + +L A TYLGRPWK FS TV M S IG ++ GW EW T T+ Y EY N+GPGS + QRV W GYR S A+A +FTVA FI G WLP+ V++ L Sbjct: 71 KLNQSVPGLAR----KPSQAISKACELTRFPELCVDSLMDFPGSLAASSSKDLIHVTVNMTLHHFSHALYSSASLSFVDMPPRARSAYDSCVELLDDSVDALSRALSSVVS-------SSAKPQDVTTWLSAALTNHDTCTEGFDGVD-----DGGVKDHMTAALQNLSELVSNCLAIFSASHDGDDFAGVPIQNRRLLGVEER-EEKFPRWMRPKEREILEMPVSQIQADIIVSKDGNGTCKTISEAIKKAPQNSTRRIIIYVKAGRYEENNLKVGRKKINLMFVGDGKGKTVISGGKSIFDNITTFHTASFAATGAGFIARDITFENWAGPAKHQAVALRIGADHAVIYRCNIIGYQDTLYVHSNRQFFRECDIYGTVDFIFGNAAVVLQNCSIYARKPMDFQKNTITAQNRKDPNQNTGISIHASRVLAASDLQATNGSTQTYLGRPWKLFSRTVYMMSYIGGHVHTRGWLEWNTTF-ALDTLYYGEYLNSGPGSGLGQRVSWPGYRVINSTAEANRFTVAEFIYGSSWLPSTGVSFLAGL 596
BLAST of g.arboreum_cottongen_reftransV1_0010388 vs. ExPASy Swiss-Prot
Match: PME3_CITSI (Pectinesterase 3 OS=Citrus sinensis PE=1 SV=1) HSP 1 Score: 375.555 bits (963), Expect = 1.320e-119 Identity = 228/545 (41.83%), Postives = 310/545 (56.88%), Query Frame = 1 Query: 211 IHKRNNSSPDTASPTELTPAASLKAVCEVTQYPXX--XXXXXXXXXXXNATDPEILFKLSLKVVIDELSGLSQYPKKLQAETNNTQ-VKHALDVCGTVFDDALDRLNDSATSLEVGDGESLLSDSKIDDLKTWLSTVITDQETCLDALEELNTTKNFNATLFEELKAAMQNSSEYASNSLAIAAKILGL-LTNFRIPIHRRLLGFQKAAPSEFPAWVSPTERRLLQESKPTPNVIVAKDGSGHFRTINEAVQLVGKKNQSRFVIYVKEGKYVENVNLDKHRWNVMIYGDGKTKTIISGSRNXXXXXXXXXXXXXXXXXRGFIAKDIKFENTAGAAKHQAVAMRSGSDRSVFYSCAFDAYQDTLYAHSNRQFYRECDILGTIDFIFGNAAVVFQNCNIQPRQPLPNQFNTITAQGKKDPNQNTGISIQKCTITPFGNL-----TANTYLGRPWKEFSTTVIMQSNIGAFLNPVGWREWVTNVDPPSTILYAEYQNTGPGSTVDQRVKWAGYRSTLSEADAGKFTVANFIQGEDWLPAATVAYEPAL 1818 ++ R NS + P A LK+ C T+YP + AS T + + ++SL + + +KL TN T+ K AL C D+ LD L+ + LE + LS DDLKT +S +T+Q TCLD + K+ + L + + SN+LA+ + + R +R+L+ + + +PAW+S +RRLLQ S TPNV+VA DGSG+F+T+ +V + R++I +K G Y ENV + K N+M GDG+T+TII+GSRN VDG+ TF +AT V G GF+A+DI F+NTAG +KHQAVA+R G+D S FY+C AYQDTLY HSNRQF+ C I GT+DFIFGNAA V QNC+I R+P Q N +TAQG+ DPNQNTGI IQK I +L + TYLGRPWKE+S TVIMQS+I ++P GW EW N +T+ Y E+QN G G+ RVKW G+R S +A FT +FI G WL + + L Sbjct: 51 VNSRKNSGDNGNEPHH----AILKSSCSSTRYPDLCFSAIAAVPEASKKVTSQKDVIEMSLNITTTAVEHNYFGIQKLLKRTNLTKREKVALHDCLETIDETLDELHKAVEDLEEYPNKKSLSQ-HADDLKTLMSAAMTNQGTCLDGFSHDDANKHVR----DALSDGQVHVEKMCSNALAMIKNMTDTDMMIMRTSNNRKLIE-ETSTVDGWPAWLSTGDRRLLQSSSVTPNVVVAADGSGNFKTVAASVAAAPQGGTKRYIIRIKAGVYRENVEVTKKHKNIMFIGDGRTRTIITGSRNVVDGSTTFKSATVAVVGEGFLARDITFQNTAGPSKHQAVALRVGADLSAFYNCDMLAYQDTLYVHSNRQFFVNCLIAGTVDFIFGNAAAVLQNCDIHARKPNSGQKNMVTAQGRADPNQNTGIVIQKSRIGATSDLKPVQGSFPTYLGRPWKEYSRTVIMQSSITDVIHPAGWHEWDGNF-ALNTLFYGEHQNAGAGAGTSGRVKWKGFRVITSATEAQAFTPGSFIAGSSWLGSTGFPFSLGL 584
BLAST of g.arboreum_cottongen_reftransV1_0010388 vs. ExPASy Swiss-Prot
Match: PME28_ARATH (Putative pectinesterase/pectinesterase inhibitor 28 OS=Arabidopsis thaliana GN=PME28 PE=2 SV=1) HSP 1 Score: 379.407 bits (973), Expect = 2.568e-119 Identity = 221/533 (41.46%), Postives = 316/533 (59.29%), Query Frame = 1 Query: 238 DTASPTELTPAA-SLKAVCEVTQYPXXXXXXXXXXXXXNATDPEILFKLSLKVVIDELSGLSQYPKKLQAETNNTQVKHALDVCGTVFDDALDRLNDSATSLEVGDGESLLSDSKIDDLKTWLSTVITDQETCLDALEELNTTKNFNATLFEELKAAMQNSSEYASNSLAIAAKILGLLTNFRIPI--HRRLLGFQKAAPSEFPAWVSPTERRLLQE--SKPTPNVIVAKDGSGHFRTINEAVQLVGKKNQSRFVIYVKEGKYVENVNLDKHRWNVMIYGDGKTKTIISGSRNXXXXXXXXXXXXXXXXXRGFIAKDIKFENTAGAAKHQAVAMRSGSDRSVFYSCAFDAYQDTLYAHSNRQFYRECDILGTIDFIFGNAAVVFQNCNIQPRQPLPNQFNTITAQGKKDPNQNTGISIQKCTITPFGNLTA-----NTYLGRPWKEFSTTVIMQSNIGAFLNPVGWREWVTNVDPPSTILYAEYQNTGPGSTVDQRVKWAGYRSTLSEADAGKFTVANFIQGEDWLPAATVAY 1806 D A E+T + ++K VC T Y + + +DP L K + + ++S +++ + + + + K ALD C + D A+ L+ S E+G E D + L+ WLS I+ ++TCLD + T N T+ + LK A+Q N LA+ ++ L +IP RRLL EFP+W+ RRLL S+ P+++VA+DGSG ++TINEA+ V KK + FV+++KEG Y E V +++ +++ GDG KT+ISGS+++ DG T+ TAT + G FIAK+I FENTAGA KHQAVA+R +D S+FY+C FD YQDTLYAHS+RQFYR+C I GTIDF+FG+AA VFQNC + R+PL NQ ITA G+KDP ++TG +Q CTI + A TYLGRPWKE+S T+IM + I F+ P GW+ W+ +T+ Y+E QNTGPG+ + +RV W G + LS+ + KFT A +IQG+ W+P V Y Sbjct: 43 DNAGDEEITTSVKAIKDVCAPTDY-KETCEDTLRKDAKDTSDPLELVKTAFNATMKQISDVAKKSQTMIELQKDPRAKMALDQCKELMDYAIGELSKSFE--ELGKFEFHKVDEALVKLRIWLSATISHEQTCLDGFQ--GTQGNAGETIKKALKTAVQ----LTHNGLAMVTEMSNYLGQMQIPEMNSRRLLS------QEFPSWMDARARRLLNAPMSEVKPDIVVAQDGSGQYKTINEALNFVPKKKNTTFVVHIKEGIYKEYVQVNRSMTHLVFIGDGPDKTVISGSKSYKDGITTYKTATVAIVGDHFIAKNIAFENTAGAIKHQAVAIRVLADESIFYNCKFDGYQDTLYAHSHRQFYRDCTISGTIDFLFGDAAAVFQNCTLLVRKPLLNQACPITAHGRKDPRESTGFVLQGCTIVGEPDYLAVKEQSKTYLGRPWKEYSRTIIMNTFIPDFVPPEGWQPWLGEFG-LNTLFYSEVQNTGPGAAITKRVTWPGIKK-LSDEEILKFTPAQYIQGDAWIPGKGVPY 558
BLAST of g.arboreum_cottongen_reftransV1_0010388 vs. ExPASy Swiss-Prot
Match: PME1_CITSI (Pectinesterase 1 OS=Citrus sinensis GN=PECS-1.1 PE=2 SV=1) HSP 1 Score: 373.629 bits (958), Expect = 8.519e-119 Identity = 231/548 (42.15%), Postives = 311/548 (56.75%), Query Frame = 1 Query: 211 IHKRNNSSPDTASPTELTPAASLKAVCEVTQYPXX--XXXXXXXXXXXNATDPEILFKLSLKVVIDELSGLSQYPKKLQAETNNTQ-VKHALDVCGTVFDDALDRLNDSATSLEVGDGESLLSDSKIDDLKTWLSTVITDQETCLDALEELNTTKNFNATLFEELKAAMQNSSEYASNSLAIAAKILGLLTNFRIPIHR----RLLGFQKAAPSEFPAWVSPTERRLLQESKPTPNVIVAKDGSGHFRTINEAVQLVGKKNQSRFVIYVKEGKYVENVNLDKHRWNVMIYGDGKTKTIISGSRNXXXXXXXXXXXXXXXXXRGFIAKDIKFENTAGAAKHQAVAMRSGSDRSVFYSCAFDAYQDTLYAHSNRQFYRECDILGTIDFIFGNAAVVFQNCNIQPRQPLPNQFNTITAQGKKDPNQNTGISIQKCTITPFGNL-----TANTYLGRPWKEFSTTVIMQSNIGAFLNPVGWREWVTNVDPPSTILYAEYQNTGPGSTVDQRVKWAGYRSTLSEADAGKFTVANFIQGEDWLPAATVAYEPAL 1818 ++ R NS + P A LK+ C T+YP + AS T + + ++SL + + +KL TN T+ K AL C D+ LD L+ + LE + LS DDLKT +S +T+Q TCLD + K+ + L + + SN+LA+ +T+ + I R R L + + +PAW+SP +RRLLQ S TPN +VA DGSG+F+T+ AV + R++I +K G Y ENV + K N+M GDG+T+TII+GSRN VDG+ TF +AT V G GF+A+DI F+NTAG +KHQAVA+R G+D S FY+C AYQDTLY HSNRQF+ C I GT+DFIFGNAA V QNC+I R+P Q N +TAQG+ DPNQNTGI IQK I +L + TYLGRPWKE+S TVIMQS+I ++P GW EW N +T+ Y E+QN+G G+ RVKW G+R S +A FT +FI G WL + + L Sbjct: 51 VNSRKNSGDNGNEPHH----AILKSSCSSTRYPDLCFSAIAAVPEASKKVTSQKDVIEMSLNITTTAVEHNYFGIQKLLKRTNLTKREKVALHDCLETIDETLDELHKAVEDLEEYPNKKSLSQ-HADDLKTLMSAAMTNQGTCLDGFSHDDANKHVR----DALSDGQVHVEKMCSNALAMIKN----MTDTDMMIMRTSNNRKLTEETSTVDGWPAWLSPGDRRLLQSSSVTPNAVVAADGSGNFKTVAAAVAAAPQGGTKRYIIRIKAGVYRENVEVTKKHKNIMFIGDGRTRTIITGSRNVVDGSTTFKSATAAVVGEGFLARDITFQNTAGPSKHQAVALRVGADLSAFYNCDMLAYQDTLYVHSNRQFFVNCLIAGTVDFIFGNAAAVLQNCDIHARKPNSGQKNMVTAQGRTDPNQNTGIVIQKSRIGATSDLKPVQGSFPTYLGRPWKEYSRTVIMQSSITDLIHPAGWHEWDGNF-ALNTLFYGEHQNSGAGAGTSGRVKWKGFRVITSATEAQAFTPGSFIAGSSWLGSTGFPFSLGL 584 The following BLAST results are available for this feature:
BLAST of g.arboreum_cottongen_reftransV1_0010388 vs. ExPASy TrEMBL
Analysis Date: 2016-11-15 (Homology Analysis for Gossypium arboreum CottonGen RefTrans V1 vs TrEMBL) Total hits: 25
Pages
BLAST of g.arboreum_cottongen_reftransV1_0010388 vs. ExPASy Swiss-Prot
Analysis Date: 2016-11-15 (Homology Analysis for Gossypium arboreum CottonGen RefTrans V1 vs SwissProt) Total hits: 25
Pagesback to topInterPro
Analysis Name: InterProScan analysis for Gossypium arboreum CottonGen RefTrans V1
Date Performed: 2016-11-14
Sequences
The
following sequences are available for this feature:
contig sequence >g.arboreum_cottongen_reftransV1_0010388 ID=g.arboreum_cottongen_reftransV1_0010388; Name=g.arboreum_cottongen_reftransV1_0010388; organism=Gossypium arboreum; type=contig; length=1961bpback to top Annotated Terms
The
following terms have been associated with
this contig:
|