g.arboreum_cottongen_reftransV1_0004526, g.arboreum_cottongen_reftransV1_0004526 (contig) Gossypium arboreum

Overview
Nameg.arboreum_cottongen_reftransV1_0004526
Unique Nameg.arboreum_cottongen_reftransV1_0004526
Typecontig
OrganismGossypium arboreum (Tree cotton)
Sequence length3025
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Chr9chromosomeg.arboreum_cottongen_reftransV1_0004526:1..3025 .
Chr9:52496243..52501317 +
Homology
BLAST of g.arboreum_cottongen_reftransV1_0004526 vs. ExPASy TrEMBL
Match: G7K6S4_MEDTR (Transcription initiation factor TFIID protein, putative OS=Medicago truncatula GN=MTR_5g026660 PE=4 SV=2)

HSP 1 Score: 378.252 bits (970), Expect = 4.867e-107
Identity = 297/532 (55.83%), Postives = 368/532 (69.17%), Query Frame = 1
Query:    4 IAKQTRWHRIAMIRKLSSEQAASGVKVDPTTISKYARG-QRMSFLQLQQQTREKCQEIWDRQIQSLSAVXXXXXXXXXXXXXXXXXFAGXXXXXXXXXXXXXXXXXXXXXKVDKADAVKGLKMRRRPYKXXXXXXXXXXXXXXXXLCRLLMDDEDDQXXXXXXXXXAVTEDAGLTFGLQPRIGVESLQRVKKTSIIPKQIVRSTQSNGSYPMNENFVKDTKDIESRIFKGSVSGKLKGMKKNGM-PSTGPLTKVKI-LGDNVK--LFKEKKSSRETFVCGACGQLGHMRTNKHCPKYGEDPETQVEATELEKTPGKSTSLEPSGQSQLKMMKKKLITKSATKIAVVEASEGEKSSTNTKALPLKFKC-STDRPSDKLTSGGTQSSDHPVTSD----PENGAKSAAKVSKIIISNRAKPDEMQVESHKLPVVIRHQVDTDRGQAESHKKSIVIKPPANMERDQVEPHKPSVVIXXXXXXXXXXXXXXXXXXXXXEVIDLDQLSQEGGTYPEYRKTKKIVELSSFEKHGKQESL 1569
            IA QTRWHRIA IRKLSSEQAASGVKVDPTTI KYARG QRMSFLQLQQQTREKCQEIWDRQ+QSLS ++G++NESDSE NSDLDSFAGDLENLLDAEEFE+GEE  N+ K DK D VK LKMRRR   AQ EEEI+DEAAEAAELCRLLMDD D+  +KKKKK K +     L   LQP+   ++ ++VK       QI  + Q NGS    E+ + D ++ E+   K S S K+  +KKN + P + P  K+K+ +G+ +K  +FKEKK SRETFVCGACGQLGHMRTNK+CPKYGEDPE Q+E+T++EK  GKS+  +PS QSQ ++  KK I+K  TK+A VE         N+  +PLKFKC ST++ SD+      QSSD PVTSD     ++    +AK+SKIII N+ K D+ Q ES K  +VIR   D  RGQ +SHK  I I+PPA ++R++   HK  V+                  KR K+V+DL+  S  G T  E+RKTK+IVEL++FEKH KQE++
Sbjct: 1140 IANQTRWHRIATIRKLSSEQAASGVKVDPTTIGKYARGGQRMSFLQLQQQTREKCQEIWDRQVQSLSTLNGDDNESDSEGNSDLDSFAGDLENLLDAEEFEDGEEATNDLKRDKGDGVKALKMRRRTTLAQTEEEIQDEAAEAAELCRLLMDD-DEAYRKKKKKGKVMVNPRRLVPKLQPKFVFDNTEQVK-------QITNTLQLNGSNHFKEDALTDHREEENLSAKKSKSVKVNKVKKNDISPISVPNKKIKLNMGEGIKNQVFKEKKPSRETFVCGACGQLGHMRTNKNCPKYGEDPEAQLESTDMEKPTGKSSFGDPSSQSQHQLPSKKSISKIVTKLAPVE---------NSTKIPLKFKCSSTEKSSDRPAVETLQSSDKPVTSDKPVISDSETAKSAKISKIIIPNKVKSDDTQAESLKHAIVIRPPTDPGRGQVDSHKFPIKIRPPAEIDRER--SHKKIVI------------------KRTKDVVDLELDSPGGNTGFEHRKTKRIVELANFEKHRKQETM 1634          

HSP 2 Score: 191.045 bits (484), Expect = 5.453e-46
Identity = 93/138 (67.39%), Postives = 116/138 (84.06%), Query Frame = 1
Query: 1888 GAKRKPVELGRYGAEYVPPTKRRRGG--EVGLANILERIVETL-RDNTEVSYLFLKPVSKKEAPDYLNIVKHPMDLSTIRDKVRRMEYKNQEEFRHDVWQIAYNAHIYNDGRNPGIPPLADQLLELCDYLLHESSDSL 2292
            G +R  VELG++G +++PPTKRRRGG  EVGLANILE IV+ + +D  ++S LFLKPV KK APDYL+I++ PMDLS IR++VR MEYK++E+FRHDVWQI +NAH YNDGRNPGIPP+AD LLE CDYLL+E+ DSL
Sbjct: 1753 GKRRSVVELGKFGEDFMPPTKRRRGGGGEVGLANILESIVDAIVKDRYDLSNLFLKPVPKKLAPDYLDIIERPMDLSKIRERVRNMEYKSREDFRHDVWQITFNAHKYNDGRNPGIPPVADMLLEYCDYLLNENDDSL 1890          
BLAST of g.arboreum_cottongen_reftransV1_0004526 vs. ExPASy TrEMBL
Match: A0A0A0KA05_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G357030 PE=4 SV=1)

HSP 1 Score: 377.481 bits (968), Expect = 8.513e-107
Identity = 287/525 (54.67%), Postives = 356/525 (67.81%), Query Frame = 1
Query:    4 IAKQTRWHRIAMIRKLSSEQAASGVKVDPTTISKYARGQRMSFLQLQQQTREKCQEIWDRQIQSLSAVXXXXXXXXXXXXXXXXXFAGXXXXXXXXXXXXXXXXXXXXXKVDKADAVKGLKMRRRPYKXXXXXXXXXXXXXXXXLCRLLMDDEDDQXXXXXXXXXAVTEDAGLTFGLQPRIGVESLQRVKKTSIIPKQIVRSTQSNGSYPMNENFVKDTKDIESRIFKGSVSGKLKGMKKNGMPSTGPLT-KVKILGDNVKLFKEKKSSRETFVCGACGQLGHMRTNKHCPKYGEDPETQVEATELEKTPGKSTSLEPSGQSQLKMMKKKLITKSATKIAVVEASEGEKSSTNTKALPLKFKCST-DRPSDKLTSGGTQSSDHPVTSDPENGAKSAAKVSKIIISNRAKPDEMQVESHKLPVVIRHQVDTDRGQAESHKKSIVIKPPANMERDQVE-PHKPSVVIXXXXXXXXXXXXXXXXXXXXXEVIDLDQLSQEGGTYPEYRKTKKIVELSSFEKHGKQESL 1569
            IAK TRWHRIAMIR+LSSEQAASGV+VDPTTISKYARGQRMSFLQLQ+QTREKCQEIW+RQIQSLSA DG ENESDSE NSDLDSFAG     L   E  E E      + +K D VKGLKMRRRP   Q EEEIEDE AEAAELCRLLMDDE ++  ++KKK   V  +A L+ G Q     E  ++        + ++   Q + +Y   EN +++ K++ES   +   SGKLK MKKN       +  K+KI GD VK FKEKKS+RE+FVCG CGQ GHMRTNK+CPKYGED ET  E T+ +K   K  +++PS QS  K + KK+  K+  K    EA EGEKS+   K LP+KFKCS+ DR SD L+    Q+SD PV SD E G KS  KV+KI  S + + +++Q ESHK  +VIR   D  +   E+HK SIVI+PP NM+R++ E P + + +IR   + +K+Q  KK+IIKRPKEV DLD+ + +G    EYRKTK+IVELSS EKH +  S+
Sbjct: 1140 IAKLTRWHRIAMIRRLSSEQAASGVQVDPTTISKYARGQRMSFLQLQRQTREKCQEIWERQIQSLSASDGAENESDSEGNSDLDSFAG-DLENLLDAEEFEDEVDTFEIRHEKTDGVKGLKMRRRPSIVQTEEEIEDEVAEAAELCRLLMDDEAER--RRKKKKNKVMGEAVLSTGFQASFFHEKPEQT-------RHLISIAQPDVTYISKEN-IREQKEVESISNRKEKSGKLKPMKKNYSSEMSLINKKLKISGDKVKNFKEKKSARESFVCGKCGQFGHMRTNKNCPKYGEDLETP-ETTDQDKVSIKLNAMDPSNQSHQKAVVKKVTPKAIAKSFTTEAFEGEKST--AKVLPVKFKCSSADRLSDNLSPALPQTSDLPVNSDNETG-KSIVKVNKITFSKK-RTEDIQFESHKPSIVIR-PPDAKKVSLEAHKPSIVIRPPTNMDRERTEFPRRSATIIRSAVETEKEQLHKKLIIKRPKEV-DLDRSAYDGSVDMEYRKTKRIVELSSLEKHTRHGSM 1646          

HSP 2 Score: 218.779 bits (556), Expect = 8.076e-55
Identity = 98/133 (73.68%), Postives = 116/133 (87.22%), Query Frame = 1
Query: 1894 KRKPVELGRYGAEYVPPTKRRRGGEVGLANILERIVETLRDNTEVSYLFLKPVSKKEAPDYLNIVKHPMDLSTIRDKVRRMEYKNQEEFRHDVWQIAYNAHIYNDGRNPGIPPLADQLLELCDYLLHESSDSL 2292
            KRKP+ELGR+  E    TKRRRGGEVGL+NILERIVETL+D  ++SYLF+KPVSKKEAPDYL+I++ PMDLSTIR+KVRR+EYK ++EFR+DVWQI YNAH+YNDGRNPGIPPLADQLL LCD LL +  + L
Sbjct: 1755 KRKPIELGRHIPEQASSTKRRRGGEVGLSNILERIVETLKDRFDISYLFIKPVSKKEAPDYLDIIERPMDLSTIREKVRRLEYKTRDEFRNDVWQIMYNAHLYNDGRNPGIPPLADQLLMLCDNLLKQCDEDL 1887          
BLAST of g.arboreum_cottongen_reftransV1_0004526 vs. ExPASy TrEMBL
Match: M4F349_BRARP (Uncharacterized protein OS=Brassica rapa subsp. pekinensis GN=Bra035499 PE=4 SV=1)

HSP 1 Score: 373.244 bits (957), Expect = 2.609e-105
Identity = 282/546 (51.65%), Postives = 367/546 (67.22%), Query Frame = 1
Query:    1 VIAKQTRWHRIAMIRKLSSEQAASGVKVDPTTISKYARGQRMSFLQLQQQTREKCQEIWDRQIQSLSAVXXXXXXXXXXXXXXXXXFAGXXXXXXXXXXXXXXXXXXXXXKVDKADAVKGLKMRRRPYKXXXXXXXXXXXXXXXXLCRLLMDDEDDQXXXXXXXXXAVTEDAGLTFGLQPRIGVESLQRVKKTSIIPKQIVRSTQSNGSYPMNENFVKDTKD--IESRIFKGSVSGKLKGMKKNGMPSTGPLTKVKILGDNVKLFKEKKSSRETFVCGACGQLGHMRTNKHCPKYGEDPETQVEATELEKTPGKSTSLEPSGQSQLKMMK-KKLITKSATKIAVVEASEGEKSSTNTKALPLKFKCS--TDRPSDKLTSGGTQSSDHPVTSDPENGAKSAAKVSKIIISNRAKPDEMQVESHK-LPVVIRHQVDTDRGQAESHKKSI-------------VIKPPANMERDQVEPHKPSVVIXXXXXXXXXXXXXXXXXXXXXEVIDLDQLSQEGGTYPEYRKTKKIVELSSFEKHGKQESLRLME 1581
            +IAKQTRWHRIAMIRKLSSEQAASGVKVDPTTI KYARGQRMSFLQ+QQQ REKCQEIWDRQ+ SLSA DG+ENES++EANSDLDSFAG     L   E     E +N +K DK D VKGLKMRRRP + + +EEIEDEA E AELCRLLM DED  +KKKKKK KAV E  G     +P IG +  + V+K + I K  + +TQ + S+ +NE+ VKDT++  ++S I K   + K K +K NG  S GPL KVKIL +N+K+FKEKKS+RE FVCGACGQ GHMRTNKHCP+Y E+ + Q E  ++EK+ GK ++ E SGQ+++K +K  K   KSA K+ V    +G+ S++ T  LPLKF+        SD L S    SS+    SD + G K+ +K+SK+ IS++AKP E +VES + LP   R     +RG++ESHK  +             +++P  +M+RDQ E  +P +VI      +++QPQKK++IKR KE+ D D  S E     E RKTK++ EL+ F+   +Q+S R+ E
Sbjct: 1128 IIAKQTRWHRIAMIRKLSSEQAASGVKVDPTTIGKYARGQRMSFLQMQQQAREKCQEIWDRQLSSLSAYDGDENESENEANSDLDSFAG-DLENLLDAEEGGEGEESNISKNDKLDGVKGLKMRRRPSQVETDEEIEDEATEYAELCRLLMQDED--QKKKKKKIKAVGEGMGSFPPPRPSIGFQIAEPVRKATFIDKNPI-ATQPDASFLVNESTVKDTRNWQVDSPILK---TPKGKQVKDNGN-SLGPLKKVKILNENLKVFKEKKSARENFVCGACGQYGHMRTNKHCPRYRENTDPQPEGVDMEKSVGKPSTSELSGQAKIKPIKSSKAAPKSAIKVTVDATPKGDSSTSKTGGLPLKFRYGIPAGAMSDTLGSEAPGSSEQAAVSDIDTGTKTTSKISKLKISSKAKPKESKVESDRPLPTYSR-----ERGESESHKPCVSGNQAASSRHTISILQPSLSMDRDQAESRRPHLVI--RPPTEREQPQKKLVIKRSKEITDHDMSSLEESPRFESRKTKRMAELTGFQ---RQQSFRVAE 1655          

HSP 2 Score: 194.126 bits (492), Expect = 4.787e-47
Identity = 91/124 (73.39%), Postives = 104/124 (83.87%), Query Frame = 1
Query: 1924 GAEYVPPTKRRRGGEVGLANILERIVETLRDNTEVSYLFLKPVSKKEAPDYLNIVKHPMDLSTIRDKVRRMEYKNQEEFRHDVWQIAYNAHIY-NDGRNPGIPPLADQLLELCDYLLHESSDSL 2292
            GA+Y P  KRR+ GEVGLANILE IV+TLR   EVS LFLKPVSKK APDY +IVK PMDLSTIRDKVR++EY+N+E+FRHDVWQI  NAH+Y N+GRNPGI PLADQLLE+CDYLL +  D L
Sbjct: 1761 GADYAPQPKRRKKGEVGLANILETIVDTLRLKEEVSGLFLKPVSKKGAPDYFDIVKRPMDLSTIRDKVRKIEYRNREQFRHDVWQIQLNAHLYNNNGRNPGIQPLADQLLEICDYLLEDYGDQL 1884          
BLAST of g.arboreum_cottongen_reftransV1_0004526 vs. ExPASy TrEMBL
Match: V7CJ31_PHAVU (Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_002G127400g PE=4 SV=1)

HSP 1 Score: 372.859 bits (956), Expect = 2.984e-105
Identity = 301/538 (55.95%), Postives = 368/538 (68.40%), Query Frame = 1
Query:    1 VIAKQTRWHRIAMIRKLSSEQAASGVKVDPTTISKYARGQRMSFLQLQQQTREKCQEIWDRQIQSLSAVXXXXXXXXXXXXXXXXXFAGXXXXXXXXXXXXXXXXXXXXXKVDKADAVKGLKMRRRPYKXXXXXXXXXXXXXXXXLCRLLMDDEDDQXXXXXXXXXAVTEDAGLTFGLQPRIGVESLQRVKKTSIIPKQIVRSTQSNGSYPMNENFVKDTKDIESRIFKGSVSGKLKGMKKNGM-PSTGPLTKVKI-LGDNVK--LFKEKKSSRETFVCGACGQLGHMRTNKHCPKYGEDPETQVEATELEKTPGKSTSLEPSGQSQ-LKMMKKKLITKSATKIAVVEASEGEKSSTNTKALPLKFKC-STDRPSDKLTSGGTQSSDHPVTSDPENGAKSAAKVSKIIISNRAKPDEMQVESHKLPVVIR---------HQVDTDRGQAESHKKSIVIKPPANMERDQVEPHKPSVVIXXXXXXXXXXXXXXXXXXXXXEVIDLDQLSQEGGTYPEYRKTKKIVELSSFEKHGKQESL 1569
            VIAKQTRWHRIAMIRKLSSEQAASGVKVDPTTISKYARGQRMSFLQLQQQTREKCQEIWDRQ+QSLSAV+ +ENESDSE NSDLDSFAGDLENLLDAEEFEEGEEG N+ K DK D VKGLKMRRRP  AQAEEEIEDEAAEAAELCRLLMDD D+  +KKKKK K   E+  L   +Q +   +S + VK        +  ++Q +G+ P+ E+ + D ++ E+   K S S K    KKN + P + P  K+K+ +G+ +K  +FKEKK SRETFVCGACGQ GHMRTNK+CPKYGED ETQ+E+ ++EK+ GK   ++ S  SQ  K   KK I+KS TKI  V+         N+  +PLKFKC S+++ SDK  +   Q+SD PVTSD E  AKS AKV+KIII  + KPD+ Q ES K  VVIR            D  RGQ + +K  I I+PP  ++++Q   HK  V+                  KR KEVI ++  S  G T  ++RKTK+IVELS+FEK  KQ+++
Sbjct: 1142 VIAKQTRWHRIAMIRKLSSEQAASGVKVDPTTISKYARGQRMSFLQLQQQTREKCQEIWDRQVQSLSAVNADENESDSEGNSDLDSFAGDLENLLDAEEFEEGEEGTNDLKRDKGDGVKGLKMRRRPTLAQAEEEIEDEAAEAAELCRLLMDD-DEADRKKKKKTKVTGEETRLVSKMQSKFAFDSSELVKP-------LTNTSQLDGNNPLKEDVITDLREEENFGAKKSKSLKANKAKKNDITPVSLPNKKIKLNMGEGIKNQVFKEKKPSRETFVCGACGQPGHMRTNKNCPKYGEDLETQLESADMEKSSGK--PIDHSSHSQPTKAPSKKSISKSTTKITPVD---------NSAKIPLKFKCGSSEKSSDKPVTETLQNSDKPVTSDSET-AKS-AKVNKIIIPKKVKPDDTQAESRKHAVVIRPPTESSRGPPPTDAGRGQVDYNKLPIKIRPPTEIDKEQ--SHKKIVI------------------KRTKEVIGVELDSPGGNTGLQHRKTKRIVELSNFEKQKKQDTV 1638          

HSP 2 Score: 199.904 bits (507), Expect = 7.880e-49
Identity = 99/138 (71.74%), Postives = 117/138 (84.78%), Query Frame = 1
Query: 1888 GAKRKPVELGRYGAEYVPPTKRRRGG--EVGLANILERIVETL-RDNTEVSYLFLKPVSKKEAPDYLNIVKHPMDLSTIRDKVRRMEYKNQEEFRHDVWQIAYNAHIYNDGRNPGIPPLADQLLELCDYLLHESSDSL 2292
            G +R   ELG+  A+Y+PPTKRRRGG  EVGLANILE IV+T+ +D  E+SYLF+KPVSKKEAPDYL+I+  PMDLS IR++VR MEYK++E+FRHDVWQI YNAH YNDGRNPGIPPLAD LLE CDYLL+E+ DSL
Sbjct: 1748 GKRRSVSELGKLSADYMPPTKRRRGGGGEVGLANILESIVDTIVKDRYELSYLFVKPVSKKEAPDYLDIIDTPMDLSRIRERVRNMEYKSREDFRHDVWQITYNAHKYNDGRNPGIPPLADMLLEYCDYLLNENDDSL 1885          
BLAST of g.arboreum_cottongen_reftransV1_0004526 vs. ExPASy TrEMBL
Match: V4SAV3_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10004140mg PE=4 SV=1)

HSP 1 Score: 367.851 bits (943), Expect = 1.106e-104
Identity = 290/528 (54.92%), Postives = 357/528 (67.61%), Query Frame = 1
Query:    1 VIAKQTRWHRIAMIRKLSSEQAASGVKVDPTTISKYARGQRMSFLQLQQQTREKCQEIWDRQIQSLSAVXXXXXXXXXXXXXXXXXFAGXXXXXXXXXXXXXXXXXXXXXKVDKADAVKGLKMRRRPYKXXXXXXXXXXXXXXXXLCRLLMDDEDDQXXXXXXXXXAVTEDAGLTFGLQPRIGVESLQRVKKTSIIPKQIVRSTQSNGSYPMNENFVKDTKDIESRIFKGSVSGKLKGMKKNGMPSTGPLTKVKILGDNVKLFKEKKSSRETFVCGACGQLGHMRTNKHCPKYGEDPETQVEATELEKTPGKSTSLEPSGQSQLKMMKKKLITKSATKIAVVEASEGEKSSTNTKALPLKFKCST-DRPSDKLTSGGTQSSDHPVTSD-PENGAKSAAKVSKIIISNRAKPDEMQVESHKLPVVIRHQVDT-DRGQAESHKKSIVIKPPANMERDQVEPHKPSVVIXXXXXXXXXXXXXXXXXXXX--------------------XEVIDLDQLSQEGGTYPEYRKT 1515
            +IAKQTRWHRIAMIRKLSSEQAAS V+VDPTTISKYARGQRM FLQLQQQTR K         QSLSA D +E  SDSE +     FAGDLENLLDAEEFEE E   +  K DK + VKGLKMRR P + QAEEEIED+AAE AELCRLLMDD++ + KKKKKK KA  E  GL+   Q   G+E ++R+KK +   K I  + Q NGS+  NE  +KD K+ ES I K ++SG ++ MKKNG+   G   KVKI+     +FKEKKSSR TFVCGACGQ GHMRTNK+CP+Y  +PETQ+E  +++K+ G  T           + KKKLI+KSATKIA++EA EGEKSS  TK +P+KFKCS+ D+  DK     TQSSD   TSD  E   KS  KV++I+ISN+ +P+E QVESHK  +VIR  VDT D+ QAESHK SI+I+PPAN +R+QVE HKPS++IRP    D++  +                            K++IDLD++SQ+G  + EYRKT
Sbjct:  836 MIAKQTRWHRIAMIRKLSSEQAASAVQVDPTTISKYARGQRMPFLQLQQQTRGK--------FQSLSAADDDEIGSDSEHSDLDS-FAGDLENLLDAEEFEEEESNYDT-KHDKVEGVKGLKMRRCPIQVQAEEEIEDDAAEVAELCRLLMDDDEAKLKKKKKKTKAPVE-GGLSLA-QSISGLEIVERLKKANKPAKHIAITVQPNGSHAANEQ-IKDPKEEESLIAKRNLSGTVQAMKKNGISPVG--KKVKIV-----MFKEKKSSRGTFVCGACGQHGHMRTNKNCPRYRAEPETQLETADMDKSWGNLTLWT---LQLKSLKKKKLISKSATKIALIEAPEGEKSSLKTKVVPVKFKCSSADKLPDKFPVASTQSSDQLSTSDVVETANKSVGKVNRIVISNKPRPEETQVESHKPSIVIRPPVDTVDKSQAESHKPSIIIRPPANTDREQVESHKPSILIRPVTTTDRELVESHKPSIVIRPPADKEREPPQKKIIIKRPKDIIDLDRVSQDGSPH-EYRKT 1339          
BLAST of g.arboreum_cottongen_reftransV1_0004526 vs. ExPASy Swiss-Prot
Match: TAF1_ARATH (Transcription initiation factor TFIID subunit 1 OS=Arabidopsis thaliana GN=TAF1 PE=1 SV=1)

HSP 1 Score: 359.377 bits (921), Expect = 1.476e-102
Identity = 278/551 (50.45%), Postives = 363/551 (65.88%), Query Frame = 1
Query:    1 VIAKQTRWHRIAMIRKLSSEQAASGVKVDPTTISKYARGQRMSFLQLQQQTREKCQEIWDRQIQSLSAVXXXXXXXXXXXXXXXXXFAGXXXXXXXXXXXXXXXXXXXXXKVDKADAVKGLKMRRRPYKXXXXXXXXXXXXXXXXLCRLLMDDEDDQXXXXXXXXXAVTEDAGLTFGLQPRIGVESLQRVKKTSIIPKQIVRSTQSNGSYPMNENFVKDTKDIESRIFKGSVSGKLKGMKKNGMPSTGPLTKVKILGDNVKLFKEKKSSRETFVCGACGQLGHMRTNKHCPKYGEDPETQVEATELEKTPGKSTSLEPSGQSQLKMMKK-KLITKSATKIAVVEASEGEKSSTNTKALPLKFKCS--TDRPSDKLTSGGTQSSDHPVTSDPENGAKSAAKVSKIIISNRAKPDEMQVESHKLPVVIRHQVDTDRGQAESHKKSI---------------------VIKPPANMERDQVEPHKPSVVIXXXXXXXXXXXXXXXXXXXXXEVIDLDQLSQEGGTYPEYRKTKKIVELSSFEKHGKQESLRLME 1581
            +IAKQTRWHRIAMIRKLSSEQAASGVKVDPTTI KYARGQRMSFLQ+QQQ REKCQEIWDRQ+ SLSA DG+ENES++EANSDLDSFAG     L   E     E +N +K DK D VKGLKMRRRP + + +EEIEDEA E AELCRLLM DED  +KKKKKK K V E  G     +P I ++S + V+K + + K+ + + Q + S+ +NE+ +KD ++++S I     + K K +K+N   S G L KVKIL +N+K+FKEKKS+RE FVCGACGQ GHMRTNKHCP+Y E+ E+Q E  +++K+ GK +S EPSG  +LK +K  K   KSA K +V EA +G+K S+ T  LPLKF+        SDK  S    SS+  V SD + G KS +K+SK+ IS++AKP E + ES +    +      +RG++ESHK S+                     + +P  +M+ DQ E  +P +VI      +++QPQKK++IKR KE+ D D  S E     E RKTK++ EL+ F+   +Q+S RL E
Sbjct: 1134 IIAKQTRWHRIAMIRKLSSEQAASGVKVDPTTIGKYARGQRMSFLQMQQQAREKCQEIWDRQLLSLSAFDGDENESENEANSDLDSFAG-DLENLLDAEEGGEGEESNISKNDKLDGVKGLKMRRRPSQVETDEEIEDEATEYAELCRLLMQDED--QKKKKKKMKGVGEGMGSYPPPRPNIALQSGEPVRKANAMDKKPI-AIQPDASFLVNESTIKDNRNVDSII----KTPKGKQVKENSN-SLGQLKKVKILNENLKVFKEKKSARENFVCGACGQHGHMRTNKHCPRYRENTESQPEGIDMDKSAGKPSSSEPSGLPKLKPIKNSKAAPKSAMKTSVDEALKGDKLSSKTGGLPLKFRYGIPAGDLSDKPVSEAPGSSEQAVVSDIDTGIKSTSKISKLKISSKAKPKESKGESERRSHSLMPTFSRERGESESHKPSVSGQPLSSTERNQAASSRHTISIPRPSLSMDTDQAESRRPHLVI--RPPTEREQPQKKLVIKRSKEMNDHDMSSLEESPRFESRKTKRMAELAGFQ---RQQSFRLSE 1670          

HSP 2 Score: 215.312 bits (547), Expect = 1.084e-55
Identity = 98/128 (76.56%), Postives = 112/128 (87.50%), Query Frame = 1
Query: 1909 ELGRYGAEYVPPTKRRRGGEVGLANILERIVETLRDNTEVSYLFLKPVSKKEAPDYLNIVKHPMDLSTIRDKVRRMEYKNQEEFRHDVWQIAYNAHIYNDGRNPGIPPLADQLLELCDYLLHESSDSL 2292
            +  R GAEY P  KRR+ GEVGLANILERIV+TLR   EVS LFLKPVSKKEAPDYL+IV++PMDLSTIRDKVR++EY+N+E+FRHDVWQI YNAH+YNDGRNPGIPPLADQLLE+CDYLL +  D L
Sbjct: 1781 DFERDGAEYAPQPKRRKKGEVGLANILERIVDTLRLKEEVSRLFLKPVSKKEAPDYLDIVENPMDLSTIRDKVRKIEYRNREQFRHDVWQIKYNAHLYNDGRNPGIPPLADQLLEICDYLLDDYEDQL 1908          
BLAST of g.arboreum_cottongen_reftransV1_0004526 vs. ExPASy Swiss-Prot
Match: TAF1B_ARATH (Transcription initiation factor TFIID subunit 1b OS=Arabidopsis thaliana GN=TAF1B PE=2 SV=1)

HSP 1 Score: 234.187 bits (596), Expect = 1.127e-61
Identity = 236/550 (42.91%), Postives = 319/550 (58.00%), Query Frame = 1
Query:    1 VIAKQTRWHRIAMIRKLSSEQAASGVKVDPTTISKYARGQRMSFLQLQQQTREKCQEIWDRQIQSLSAVXXXXXXXXXXXXXXXXXFAGXXXXXXXXXXXXXXXXXXXXXKVDKADAVKGLKMRRRPYKXXXXXXXXXXXXXXXXLCRLLMDDEDDQXXXXXXXXXAVTEDAGLTFGLQPRIGVESLQRVKKTSIIPKQIVRSTQSNGSYPM-NENFVKDTKDIESRIFKGSVSGKLKGMKKNGMPSTGPLTKVKILGDNVKLFKEKKSSRETFVCGACGQLGHMRTNKHCPKYGEDPETQVEATELEKTPGKSTSLEPSGQSQLKMM-KKKLITKSATKIAVVEASEGEKSSTNTKALPLKFKCSTDRPSDKLTSGGTQSSDHPVTSDPENGAKSAAKVSKIIISNRAKPDEMQVESHKLPVVIRHQVDTDRGQAESHKKSI---------------------VIKPPANMERDQVEPHKPSVVIXXXXXXXXXXXXXXXXXXXXXEVIDLDQLSQEGGTYPEYRKTKKIVELSSFEKHGKQESLRLME 1581
            +IAKQT+ HR AMIRK+SSEQAASG KV PTT+  ++R QRMSFLQLQQQ RE C EIWDRQ  SLSA D + NES++EANSDLDSF GDLE+LLDAE+  EGEE N +   +K D VKGLKMRR P + + +EEIEDEAAE  ELCRLLM DE+D+KK          +D G   G  P        R      I K+ + +T+ + S+ + NE+ VK TK+++    K   S K K +K+ G P        KIL +N K+F  KK++R  FVCGACGQ GHM+TNKHCPKY  + E+Q E+ +++K+ GK +S + SG+  L  +  KK   KSATKI+V EA++   S++ T                        SSD    S+ ++G K  ++  K+ IS++AKP   +VES      +      +RG++E H  S+                     V +P  ++++DQ E  +P  VI       K+  QKK++IKR KE+ D D  S E     E RKTK++ EL+ F+   +Q+ LRL E
Sbjct: 1040 IIAKQTQRHRTAMIRKISSEQAASGGKVGPTTVGMFSRSQRMSFLQLQQQAREMCHEIWDRQRLSLSACDDDGNESENEANSDLDSFVGDLEDLLDAEDGGEGEESNKSMN-EKLDGVKGLKMRRWPSQVEKDEEIEDEAAEYVELCRLLMQDENDKKK-------KKLKDVGEGIGSFPP------PRSNFEPFIDKKYI-ATEPDASFLIVNESTVKHTKNVDKATSK---SPKDKQVKEIGTPIC---QMKKILKENQKVFMGKKTARANFVCGACGQHGHMKTNKHCPKYRRNTESQPESMDMKKSTGKPSSSDLSGEVWLTPIDNKKPAPKSATKISVNEATKVGDSTSKTPG----------------------SSDVAAVSEIDSGTKLTSR--KLKISSKAKPKASKVESDSPFHSLMPAYSRERGESELHNPSVSGQLLPSTETDQAASSRYTTSVPQPSLSIDKDQAESCRPHRVI--WPPTGKEHSQKKLVIKRLKEITDHDSGSLEETPQFESRKTKRMAELADFQ---RQQRLRLSE 1539          

HSP 2 Score: 185.652 bits (470), Expect = 2.908e-46
Identity = 88/129 (68.22%), Postives = 102/129 (79.07%), Query Frame = 1
Query: 1909 ELGRYGAEYVPPTKRRRGGEVGLANILERIVETLR-DNTEVSYLFLKPVSKKEAPDYLNIVKHPMDLSTIRDKVRRMEYKNQEEFRHDVWQIAYNAHIYNDGRNPGIPPLADQLLELCDYLLHESSDSL 2292
            +  R   EY P  KRR+ G+VGLANILE IV+TLR     VSYLFLKPV+KKEAP+YL IVK PMDLSTIRDKVRRMEY+++++FRHDVWQI +NAH+YNDGRN  IPPLAD+LL  CD LL E  D L
Sbjct: 1643 DFERNRTEYAPQPKRRKKGQVGLANILESIVDTLRVKEVNVSYLFLKPVTKKEAPNYLEIVKCPMDLSTIRDKVRRMEYRDRQQFRHDVWQIKFNAHLYNDGRNLSIPPLADELLVKCDRLLDEYRDEL 1771          
BLAST of g.arboreum_cottongen_reftransV1_0004526 vs. ExPASy Swiss-Prot
Match: TAF1_ORYSJ (Transcription initiation factor TFIID subunit 1 OS=Oryza sativa subsp. japonica GN=TAF1 PE=2 SV=1)

HSP 1 Score: 225.328 bits (573), Expect = 6.674e-59
Identity = 218/530 (41.13%), Postives = 303/530 (57.17%), Query Frame = 1
Query:    4 IAKQTRWHRIAMIRKLSSEQAASGVKVDPTTISKYARGQRMSFLQLQQQTREKCQEIWDRQIQSLSAVXXXXXXXXXXXXXXXXXFAGXXXXXXXXXXXXXXXXXXXXXKVDKADAVKGLKMRRRPYKXXXXXXXXXXXXXXXXLCRLLMDDEDDQXXXXXXXXXAVTEDAGLTFGLQPRIGVESLQRVKKTSIIPKQIVRSTQSNGSYPMNENFVKDTKDIESRIFKGSVSGKLKGMKKNGMPSTGPLTKVK---ILGDNVKLFKEKKSSR--ETFVCGACGQLGHMRTNKHCPKYGEDPETQVEATELEKTPGKSTSLEPSGQSQLKMMKKKLITKSATKIAVVEASEGEKSSTNTKALPLKFKC-----STDRPSDKLTSGGTQSSDHPVTSDPENGAKSAAKVSKIIISNRAKPDEMQVESHKLPVVIRHQVDTDRGQAESHKKSIVIKPPANMERDQVEPHKPSVVIXXXXXXXXXXXXXXXXXXXXXEVIDLDQLSQEGGTYPEYRKTKKIVELSSFEKHGKQE 1563
            I K TRWHRIAM+RKLSSEQAASGV +D   +SK+ARGQRMSFLQLQQQT+EKCQEIWDRQIQSLSA+DG EN SD+EANSDLDSFAGDLENLLDAEEF++ + GN + + DK D ++GLKMRR   ++Q  EEI+D+ AEAA + +LL + + D K+KK+              G + + G               Q+++S+   G+    E+  ++ K++E+   +GS+  KL+   K G  +   +  VK   I G +   FKEK+     +T VCGACGQLGHMRTNK CPKYGEDPET    +E++    +S   +    +Q+K   K+L+ K +++      +EG +S    K +P+KFKC     S DR    ++   +  SD  +       +KS  KV+KI ISN+ K D+                       ++ K S+VI+PPA +E+D   P K  ++                   +  +V+   Q   E  +  E RKT+KIVELSSFEK  +++
Sbjct: 1110 IDKLTRWHRIAMVRKLSSEQAASGVTMDEIPVSKFARGQRMSFLQLQQQTKEKCQEIWDRQIQSLSAMDGNENGSDTEANSDLDSFAGDLENLLDAEEFDDEDVGNTDIRSDKMDGMRGLKMRRCHTQSQINEEIQDDVAEAALVEKLLEESDSDMKRKKQPVETTNYSTPMYNQGNKMKQGKAG------------QMIKSSVYAGALTPKESIPREAKEVEN-FAEGSLPSKLR--TKTGFDANDDIILVKRKNIPGKDG--FKEKRQGARGDTLVCGACGQLGHMRTNKLCPKYGEDPET----SEMDVNSIRSHPPDIVSNAQIKTSNKRLVAKVSSEAF---ETEGPESIEKAKPVPVKFKCGAPEKSLDR---NMSISASLVSDKRMMD--ATDSKSTGKVNKIKISNKIKYDDY--------------------PPDTPKPSVVIRPPAEVEKDL--PRKKIII-------------------KQPKVLGDQQRPTELRSGQEPRKTRKIVELSSFEKRDRED 1569          

HSP 2 Score: 183.341 bits (464), Expect = 1.329e-45
Identity = 87/133 (65.41%), Postives = 104/133 (78.20%), Query Frame = 1
Query: 1894 KRKPVELGRYGAEYVPPTKRRRGGEVGLANILERIVETLRDNTEVSYLFLKPVSKKEAPDYLNIVKHPMDLSTIRDKVRRMEYKNQEEFRHDVWQIAYNAHIYNDGRNPGIPPLADQLLELCDYLLHESSDSL 2292
            +R P ++     EY PP KR RGGEV L+NILE+IV+ LR     S+LF KPV+KKEAPDY +I++ PMDL TIRDKVR+MEYKN+E+FRHDV QIA NAH YN  R+P IPPLAD+LLELCDYLL ES+D L
Sbjct: 1674 RRTPADM----TEYTPPAKRHRGGEVELSNILEKIVDHLR-TMSCSFLFRKPVTKKEAPDYFDIIERPMDLGTIRDKVRKMEYKNREDFRHDVAQIALNAHTYNLNRHPHIPPLADELLELCDYLLEESADVL 1801          
BLAST of g.arboreum_cottongen_reftransV1_0004526 vs. ExPASy Swiss-Prot
Match: TAF1_DICDI (Transcription initiation factor TFIID subunit 1 OS=Dictyostelium discoideum GN=taf1 PE=3 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 4.478e-12
Identity = 41/104 (39.42%), Postives = 63/104 (60.58%), Query Frame = 1
Query: 1960 GGEVGLANILERIVETLRDNTEVSYLFLKPVSKKEAPDYLNIVKHPMDLSTIRDKVRRMEYKNQEEFRHDVWQIAYNAHIYNDGRNPGIPPLADQLLELCDYLL 2271
            G +V L+NI ERI++ LR N E    F   V+ K APDY  ++K+P+DL+T+RD+ R  EYK++ +F   +  +  N   YN+ R   + P+A++LL     LL
Sbjct: 2112 GADVELSNIFERILDKLRTNDEF-IAFRHKVTPKLAPDYHKVIKNPIDLTTMRDRNRHWEYKSKNQFIDAIKLMVANCFEYNEKRFSHLLPIAEKLLTSTLQLL 2214          
BLAST of g.arboreum_cottongen_reftransV1_0004526 vs. ExPASy Swiss-Prot
Match: TAF1_MESAU (Transcription initiation factor TFIID subunit 1 OS=Mesocricetus auratus GN=TAF1 PE=2 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 6.314e-12
Identity = 46/117 (39.32%), Postives = 65/117 (55.56%), Query Frame = 1
Query: 1948 KRRRGGEVGLANILERIVETLRD--NTEVSYLFLKPVSKKEAPDYLNIVKHPMDLSTIRDKVRRMEYKNQEEFRHDVWQIAYNAHIYNDGRNPGIPPLADQLLELCDYLLHESSDSL 2292
            +RR    V L++ILE I+  +RD  NT   Y F  PV+ K   DY  I+  PMDL T+R+ VR+  Y ++EEFR  +  I  N+  YN G    +  ++  +L+LCD  L E  D L
Sbjct: 1371 RRRTDPMVTLSSILESIINDMRDLPNT---YPFHTPVNAKVVKDYYKIITRPMDLQTLRENVRKRLYPSREEFREHLELIVKNSATYN-GPKHSLTQISQSMLDLCDEKLKEKEDKL 1483          

HSP 2 Score: 57.7658 bits (138), Expect = 6.272e-7
Identity = 36/109 (33.03%), Postives = 55/109 (50.46%), Query Frame = 1
Query: 1966 EVGLANILERIVETLRDNTEVSYLFLKPVSKKEAPDYLNIVKHPMDLSTIRDKVRRMEYKNQEEFRHDVWQIAYNAHIYNDGRNPGIPPLADQLLELCDYLLHESSDSL 2292
            +V  + IL+ IV         S+ F  PV+KK  PDY  ++  PMDL TIR  + + +Y+++E F  DV  I  N+  YN G        A +++ +C   L E  + L
Sbjct: 1499 QVAFSFILDNIVTQKMMAVPDSWPFHHPVNKKFVPDYYKVIVSPMDLETIRKNISKHKYQSRESFLDDVNLILANSVKYN-GSESQYTKTAQEIVNVCYQTLTEYDEHL 1606          
BLAST of g.arboreum_cottongen_reftransV1_0004526 vs. ExPASy Swiss-Prot
Match: TAF1_MOUSE (Transcription initiation factor TFIID subunit 1 OS=Mus musculus GN=Taf1 PE=1 SV=2)

HSP 1 Score: 73.9442 bits (180), Expect = 6.331e-12
Identity = 46/117 (39.32%), Postives = 65/117 (55.56%), Query Frame = 1
Query: 1948 KRRRGGEVGLANILERIVETLRD--NTEVSYLFLKPVSKKEAPDYLNIVKHPMDLSTIRDKVRRMEYKNQEEFRHDVWQIAYNAHIYNDGRNPGIPPLADQLLELCDYLLHESSDSL 2292
            +RR    V L++ILE I+  +RD  NT   Y F  PV+ K   DY  I+  PMDL T+R+ VR+  Y ++EEFR  +  I  N+  YN G    +  ++  +L+LCD  L E  D L
Sbjct: 1397 RRRTDPMVTLSSILESIINDMRDLPNT---YPFHTPVNAKVVKDYYKIITRPMDLQTLRENVRKRLYPSREEFREHLELIVKNSATYN-GPKHSLTQISQSMLDLCDEKLKEKEDKL 1509          

HSP 2 Score: 57.7658 bits (138), Expect = 6.231e-7
Identity = 36/109 (33.03%), Postives = 55/109 (50.46%), Query Frame = 1
Query: 1966 EVGLANILERIVETLRDNTEVSYLFLKPVSKKEAPDYLNIVKHPMDLSTIRDKVRRMEYKNQEEFRHDVWQIAYNAHIYNDGRNPGIPPLADQLLELCDYLLHESSDSL 2292
            +V  + IL+ IV         S+ F  PV+KK  PDY  ++  PMDL TIR  + + +Y+++E F  DV  I  N+  YN G        A +++ +C   L E  + L
Sbjct: 1525 QVAFSFILDNIVTQKMMAVPDSWPFHHPVNKKFVPDYYKVIVSPMDLETIRKNISKHKYQSRESFLDDVNLILANSVKYN-GPESQYTKTAQEIVNVCHQTLTEYDEHL 1632          
BLAST of g.arboreum_cottongen_reftransV1_0004526 vs. ExPASy Swiss-Prot
Match: TAF1_HUMAN (Transcription initiation factor TFIID subunit 1 OS=Homo sapiens GN=TAF1 PE=1 SV=2)

HSP 1 Score: 73.9442 bits (180), Expect = 6.481e-12
Identity = 46/117 (39.32%), Postives = 65/117 (55.56%), Query Frame = 1
Query: 1948 KRRRGGEVGLANILERIVETLRD--NTEVSYLFLKPVSKKEAPDYLNIVKHPMDLSTIRDKVRRMEYKNQEEFRHDVWQIAYNAHIYNDGRNPGIPPLADQLLELCDYLLHESSDSL 2292
            +RR    V L++ILE I+  +RD  NT   Y F  PV+ K   DY  I+  PMDL T+R+ VR+  Y ++EEFR  +  I  N+  YN G    +  ++  +L+LCD  L E  D L
Sbjct: 1376 RRRTDPMVTLSSILESIINDMRDLPNT---YPFHTPVNAKVVKDYYKIITRPMDLQTLRENVRKRLYPSREEFREHLELIVKNSATYN-GPKHSLTQISQSMLDLCDEKLKEKEDKL 1488          

HSP 2 Score: 57.3806 bits (137), Expect = 7.307e-7
Identity = 36/109 (33.03%), Postives = 56/109 (51.38%), Query Frame = 1
Query: 1966 EVGLANILERIVETLRDNTEVSYLFLKPVSKKEAPDYLNIVKHPMDLSTIRDKVRRMEYKNQEEFRHDVWQIAYNAHIYNDGRNPGIPPLADQLLELCDYLLHESSDSL 2292
            +V  + IL+ IV         S+ F  PV+KK  PDY  ++ +PMDL TIR  + + +Y+++E F  DV  I  N+  YN G        A +++ +C   L E  + L
Sbjct: 1504 QVAFSFILDNIVTQKMMAVPDSWPFHHPVNKKFVPDYYKVIVNPMDLETIRKNISKHKYQSRESFLDDVNLILANSVKYN-GPESQYTKTAQEIVNVCYQTLTEYDEHL 1611          
BLAST of g.arboreum_cottongen_reftransV1_0004526 vs. ExPASy Swiss-Prot
Match: TAF1L_HUMAN (Transcription initiation factor TFIID subunit 1-like OS=Homo sapiens GN=TAF1L PE=1 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 1.429e-11
Identity = 45/117 (38.46%), Postives = 65/117 (55.56%), Query Frame = 1
Query: 1948 KRRRGGEVGLANILERIVETLRD--NTEVSYLFLKPVSKKEAPDYLNIVKHPMDLSTIRDKVRRMEYKNQEEFRHDVWQIAYNAHIYNDGRNPGIPPLADQLLELCDYLLHESSDSL 2292
            +RR    V L++ILE I+  +RD  NT   + F  PV+ K   DY  I+  PMDL T+R+ VR+  Y ++EEFR  +  I  N+  YN G    +  ++  +L+LCD  L E  D L
Sbjct: 1395 RRRTDPMVTLSSILESIINDMRDLPNT---HPFHTPVNAKVVKDYYKIITRPMDLQTLRENVRKCLYPSREEFREHLELIVKNSATYN-GPKHSLTQISQSMLDLCDEKLKEKEDKL 1507          
BLAST of g.arboreum_cottongen_reftransV1_0004526 vs. ExPASy Swiss-Prot
Match: TAF1_DROME (Transcription initiation factor TFIID subunit 1 OS=Drosophila melanogaster GN=Taf1 PE=1 SV=3)

HSP 1 Score: 70.4774 bits (171), Expect = 7.844e-11
Identity = 47/116 (40.52%), Postives = 63/116 (54.31%), Query Frame = 1
Query: 1945 TKRRRGGEVGLANILERIVETLRDNTEVSYLFLKPVSKKEAPDYLNIVKHPMDLSTIRDKVRRMEYKNQEEFRHDVWQIAYNAHIYNDGRNPGIPPLADQLLELCDYLLHESSDSL 2292
             +RR    V L++ILE I   LR   +VS  FL PVS K+ PDY  +V  PMDL T+R+ +R+  Y ++E F  D+ QI  N+ IYN G        A ++   C  LL E  D L
Sbjct: 1465 NRRRTDPVVVLSSILEIIHNELRSMPDVS-PFLFPVSAKKVPDYYRVVTKPMDLQTMREYIRQRRYTSREMFLEDLKQIVDNSLIYN-GPQSAYTLAAQRMFSSCFELLAEREDKL 1578          
BLAST of g.arboreum_cottongen_reftransV1_0004526 vs. ExPASy Swiss-Prot
Match: SPT7_SCHPO (Transcriptional activator spt7 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=spt7 PE=1 SV=2)

HSP 1 Score: 70.0922 bits (170), Expect = 8.022e-11
Identity = 35/84 (41.67%), Postives = 51/84 (60.71%), Query Frame = 1
Query: 1954 RRGGEVGLANILERIVETLRDNTEVSYLFLKPVSKKEAPDYLNIVKHPMDLSTIRDKVRRMEYKNQEEFRHDVWQIAYNAHIYN 2205
            +R G+  L    E++V  LR  TE S  FL  VSK++APDY  ++K PMDL TI   ++ + Y +++EF HD+  I  N  +YN
Sbjct:  309 QRIGQEELYEAAEKVVLELRSYTEHSLAFLTKVSKRDAPDYYTVIKEPMDLGTILRNLKNLHYNSKKEFVHDLMLIWSNCFLYN 392          
The following BLAST results are available for this feature:
BLAST of g.arboreum_cottongen_reftransV1_0004526 vs. ExPASy TrEMBL
Analysis Date: 2016-11-15 (Homology Analysis for Gossypium arboreum CottonGen RefTrans V1 vs TrEMBL)
Total hits: 25
Match NameE-valueIdentityDescription
G7K6S4_MEDTR4.867e-10755.83Transcription initiation factor TFIID protein, put... [more]
A0A0A0KA05_CUCSA8.513e-10754.67Uncharacterized protein OS=Cucumis sativus GN=Csa_... [more]
M4F349_BRARP2.609e-10551.65Uncharacterized protein OS=Brassica rapa subsp. pe... [more]
V7CJ31_PHAVU2.984e-10555.95Uncharacterized protein OS=Phaseolus vulgaris GN=P... [more]
V4SAV3_9ROSI1.106e-10454.92Uncharacterized protein OS=Citrus clementina GN=CI... [more]

Pages

back to top
BLAST of g.arboreum_cottongen_reftransV1_0004526 vs. ExPASy Swiss-Prot
Analysis Date: 2016-11-15 (Homology Analysis for Gossypium arboreum CottonGen RefTrans V1 vs SwissProt)
Total hits: 21
Match NameE-valueIdentityDescription
TAF1_ARATH1.476e-10250.45Transcription initiation factor TFIID subunit 1 OS... [more]
TAF1B_ARATH1.127e-6142.91Transcription initiation factor TFIID subunit 1b O... [more]
TAF1_ORYSJ6.674e-5941.13Transcription initiation factor TFIID subunit 1 OS... [more]
TAF1_DICDI4.478e-1239.42Transcription initiation factor TFIID subunit 1 OS... [more]
TAF1_MESAU6.314e-1239.32Transcription initiation factor TFIID subunit 1 OS... [more]
TAF1_MOUSE6.331e-1239.32Transcription initiation factor TFIID subunit 1 OS... [more]
TAF1_HUMAN6.481e-1239.32Transcription initiation factor TFIID subunit 1 OS... [more]
TAF1L_HUMAN1.429e-1138.46Transcription initiation factor TFIID subunit 1-li... [more]
TAF1_DROME7.844e-1140.52Transcription initiation factor TFIID subunit 1 OS... [more]
SPT7_SCHPO8.022e-1141.67Transcriptional activator spt7 OS=Schizosaccharomy... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan analysis for Gossypium arboreum CottonGen RefTrans V1
Date Performed: 2016-11-14
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 139..159
NoneNo IPR availableCOILSCoilCoilcoord: 117..137
NoneNo IPR availableCOILSCoilCoilcoord: 540..598
NoneNo IPR availablePFAMPF15288zf-CCHC_6coord: 263..281
e-value: 6.4E-5
score: 22.6
NoneNo IPR availablePANTHERPTHR13900TRANSCRIPTION INITIATION FACTOR TFIIDcoord: 1..330
NoneNo IPR availablePANTHERPTHR13900TRANSCRIPTION INITIATION FACTOR TFIIDcoord: 412..594
NoneNo IPR availablePANTHERPTHR13900:SF0TRANSCRIPTION INITIATION FACTOR TFIID SUBUNIT 1-RELATEDcoord: 624..759
NoneNo IPR availablePANTHERPTHR13900:SF0TRANSCRIPTION INITIATION FACTOR TFIID SUBUNIT 1-RELATEDcoord: 1..330
NoneNo IPR availablePANTHERPTHR13900TRANSCRIPTION INITIATION FACTOR TFIIDcoord: 624..759
NoneNo IPR availablePANTHERPTHR13900:SF0TRANSCRIPTION INITIATION FACTOR TFIID SUBUNIT 1-RELATEDcoord: 412..594
IPR001487BromodomainPRINTSPR00503BROMODOMAINcoord: 693..711
score: 26.43
coord: 663..676
score: 31.68
coord: 711..730
score: 26.96
coord: 677..693
score: 54.35
IPR001487BromodomainSMARTSM00297bromo_6coord: 640..750
e-value: 5.8E-23
score: 92.3
IPR001487BromodomainPFAMPF00439Bromodomaincoord: 651..726
e-value: 1.2E-18
score: 66.8
IPR001487BromodomainGENE3D1.20.920.10coord: 637..752
e-value: 6.5E-26
score: 89.9
IPR001487BromodomainPROSITEPS50014BROMODOMAIN_2coord: 660..730
score: 18.571
IPR001487BromodomainSUPERFAMILY47370Bromodomaincoord: 632..751
IPR018359Bromodomain, conserved sitePROSITEPS00633BROMODOMAIN_1coord: 665..722

Sequences
The following sequences are available for this feature:

contig sequence

>g.arboreum_cottongen_reftransV1_0004526 ID=g.arboreum_cottongen_reftransV1_0004526; Name=g.arboreum_cottongen_reftransV1_0004526; organism=Gossypium arboreum; type=contig; length=3025bp
GTGATTGCAAAACAAACTAGGTGGCATCGTATTGCAATGATACGCAAGCT
CTCAAGTGAGCAAGCTGCATCAGGAGTCAAGGTTGATCCAACAACTATAA
GCAAGTATGCACGGGGACAGCGAATGTCCTTTCTTCAGTTACAACAGCAG
ACCAGAGAAAAATGTCAGGAAATATGGGATCGCCAAATTCAGTCTCTTTC
AGCTGTTGATGGTGAAGAAAATGAAAGTGATTCTGAGGCAAATAGTGATC
TTGATTCCTTTGCTGGCGACCTAGAAAATTTGCTTGATGCAGAGGAATTC
GAAGAAGGGGAAGAAGGTAACAACAATAACAAGGTTGACAAAGCAGATGC
TGTTAAGGGGCTCAAGATGAGAAGACGTCCCTATAAGGCTCAGGCAGAAG
AAGAAATTGAAGATGAGGCTGCTGAAGCTGCTGAATTATGTCGTTTACTC
ATGGATGATGAGGATGACCAAAAGAAGAAAAAAAAGAAGAAAAACAAAGC
TGTTACAGAAGATGCTGGGTTGACTTTCGGCTTACAACCACGCATTGGTG
TTGAGAGTTTACAACGTGTTAAGAAAACAAGCATAATTCCCAAGCAAATT
GTTCGTTCTACTCAATCTAATGGGTCATATCCTATGAATGAGAATTTTGT
CAAGGATACAAAGGATATTGAAAGTAGAATTTTTAAAGGAAGCGTGTCTG
GAAAGTTGAAAGGAATGAAAAAAAATGGTATGCCAAGCACAGGTCCATTA
ACTAAAGTCAAAATATTGGGAGACAATGTCAAGTTGTTCAAGGAGAAGAA
ATCATCGAGAGAAACTTTTGTCTGTGGAGCTTGTGGTCAGCTTGGACACA
TGAGGACCAACAAGCACTGCCCCAAGTATGGAGAAGATCCAGAAACGCAG
GTTGAAGCTACTGAGTTGGAAAAAACTCCTGGGAAATCAACTTCGCTAGA
ACCCTCTGGTCAGTCCCAATTGAAGATGATGAAAAAGAAGCTCATAACTA
AAAGTGCGACAAAGATAGCAGTTGTAGAAGCTTCGGAGGGTGAAAAATCT
AGTACAAACACAAAAGCTCTTCCGTTGAAATTCAAATGCTCTACTGATAG
GCCGTCTGATAAACTTACTTCTGGAGGGACACAAAGTTCTGACCATCCAG
TCACTTCTGATCCAGAAAATGGAGCCAAGTCTGCTGCCAAGGTTAGTAAA
ATAATTATTTCCAACAGGGCTAAGCCTGATGAAATGCAGGTTGAGTCTCA
TAAGCTGCCTGTTGTTATACGGCATCAAGTGGATACCGATAGAGGCCAAG
CTGAATCCCATAAGAAATCTATTGTTATAAAGCCACCAGCAAACATGGAG
AGGGACCAAGTTGAACCTCATAAACCCTCTGTTGTCATACGCCCACCAGC
AGATAAAGATAAGGATCAACCTCAAAAAAAAATTATAATCAAGCGACCGA
AGGAAGTTATTGATTTGGATCAACTTAGTCAAGAGGGAGGCACTTATCCT
GAATACAGGAAAACAAAAAAAATAGTTGAATTGTCAAGCTTTGAGAAGCA
TGGGAAGCAGGAAAGCTTGCGATTAATGGAGCCAAAAGCAAGACGGAAAG
CTAAAGAGGAGAGAAGATGGTGGGAAGAGGAAGAGAAGAGGAGAAATGTG
GAGAGAATAAGAGAAGACAGGGCAAGGAAGCTTTATGAGGAAGAAATGAG
ACTGCTGGAAGAGCGAGAAAGATTTGCTGAGATCACAAGATACACTGAAG
ACATTCGAAGAGAGAGGGAGGAAGAGGAACGCCAAAAAGCAAAGAAGAAA
AAGAAGAAAAAGGCTGAAATAAAAGAGGATTATTTAGAAGACTACAGGAC
AAGAAGAAATGACAGAAGAGCACCGGAAAGAGATCGAGGTGCAAAAAGGA
AACCTGTTGAGTTAGGACGATATGGTGCAGAGTATGTCCCTCCAACAAAG
CGGCGCAGAGGGGGAGAGGTTGGTTTGGCCAACATCTTAGAGCGGATTGT
AGAAACACTTAGAGATAATACCGAGGTGTCCTATCTGTTCTTAAAACCAG
TGTCCAAGAAGGAGGCCCCTGACTACTTGAACATTGTAAAGCACCCAATG
GATTTGTCCACGATAAGGGACAAGGTTAGGCGGATGGAATACAAAAATCA
AGAAGAATTTAGGCATGATGTATGGCAGATTGCCTACAACGCTCATATCT
ACAATGATGGTCGTAATCCTGGTATTCCTCCTCTTGCCGATCAGCTTTTG
GAGCTTTGTGACTACTTGCTACATGAGTCTTCTGATAGCTTGGCTGAAGC
TGAAGCAGGTATAGGGGAAGCTTAATCGGGTAACACATTTAAAATCATTC
ATCATCTGAAAGCCAAAATTCCCTCACAGTAGAACTGCTGCTTCTCTGGG
TATTAGGGGTTTCCAGGCTTTGATGAACCATGGTAATAGAGCTTTGCATA
TGTATAGTTGAAACCTCTAGTGCTCGAGTCGTTTCAGGCATAAAAAAGAA
CCTAGTTCATATAGGATTATTATGGTTAAGAAAAAGGGATGATGACAACC
TAGGTGACATAGCCAGTAAGGTCGTCTAGAGATGAAAGCTTGTAGTGAAG
CAGATCCCAGTTGAAAGCATTTGCTGTTGAGGACTAAAAGACCCCCAAGG
CAGTCATTCAGAAGAGCTTCATGTCTGCATACTGTTGGCCAATAGATGAA
TCATTCCCATGAAAATATGGGACCTATCAGGCAATTATCTTGAAGAGCTT
TCATCTTTTGGCATTAATTATGTTTTACTTGGGGGAAGAATCTGAAGCTG
GTGGGTGAAATGCTTCAGTTGTTTACAAGATGAAAAAACTTGGGCAGTCA
AAAGTCCTTTCCACATAGGTTAGTGTGATTCAAGTTTTATTTAACATTTT
TAATAATAACTTGTGAGAGAGAGGGAAGCTGATATATAGTGAAGAATTTT
GATGCATAATTGATAACTCTGTACCATAAATATCTATGTAACCTCTAATG
TATTCTTCTCCCTTTTTTGTTTCCG
back to top
Annotated Terms
The following terms have been associated with this contig:
Vocabulary: INTERPRO
TermDefinition
IPR001487Bromodomain
IPR018359Bromodomain_CS
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding