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Marker Overview
| Name | CSIRO_D5chr11_53982359 |
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| Alias | Chr11_53982359
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| dbSNP ID | N/A |
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| Type | SNP |
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| SNP Alleles | A/T |
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| 5' Flanking Sequence | TCCCGTTTTTATGGAAGATAAGGAAGATTTTCAACATGGGATCGGAGAAAAACTTGAAGA
AATCAATCGAAATCGTTCACGAATTCGCCGATAACATCAT |
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| 3' Flanking Sequence | AAAACACGATTACAATCCAAAGACCAAAGCAAAGACGAAGATTTACTATCCAGGTTCATT
ACAAGCTACGACAATTCACCTCAGTTTCTCCGAGATATAA |
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| Species | Gossypium hirsutum |
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| Germplasm | Siokra 1-4
MCU-5 (PI 694627)
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| Source Type | restriction-site associated DNA
RNA-seq and restriction-site associated DNA |
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| Restriction Enzyme | EcoRI; ApekI; SbfI |
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| Publication | [view all] |
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| Contact | Zhu, Qian-Hao
Wilson, Iain
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| Comment | Data obtained 2014. SNP location is based on D5 JGI 221 position |
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Alignments
The following features are aligned
Sequence
>CSIRO_D5chr11_53982359 ID=CSIRO_D5chr11_53982359; Name=CSIRO_D5chr11_53982359; organism=Gossypium hirsutum; type=genetic_marker; length=205bp
TCCCGTTTTTATGGAAGATAAGGAAGATTTTCAACATGGGATCGGAGAAA
AACTTGAAGAAATCAATCGAAATCGTTCACGAATTCGCCGATAACATCAT
[A/T]AAAACACGATTACAATCCAAAGACCAAAGCAAAGACGAAGATTTA
CTATCCAGGTTCATTACAAGCTACGACAATTCACCTCAGTTTCTCCGAGA
TATAA
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