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Marker Overview
| Name | CSIRO_D5chr08_50782563 |
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| Alias | Chr08_50782563
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| dbSNP ID | N/A |
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| Type | SNP |
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| SNP Alleles | T/C |
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| 5' Flanking Sequence | ATTAATTGTAATTTCATTTTTCTTTTCTACTTTAAGGGAATATTTGAAATTATATAATCA
AAGAAAATATAAGTTTTATAGACAATTATTAAATATGAGC |
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| 3' Flanking Sequence | GAGTTGAATTCTTTAAGAATAATATGGAAACATAAAATAAAATTTTAAAATTTAGAAGGG
GATTAAATTATTTAATTAAATTAATTTTAATATTATAGTA |
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| Species | Gossypium hirsutum |
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| Germplasm | Siokra 1-4
MCU-5 (PI 694627)
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| Source Type | restriction-site associated DNA
RNA-seq and restriction-site associated DNA |
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| Restriction Enzyme | EcoRI; ApekI; SbfI |
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| Publication | [view all] |
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| Contact | Zhu, Qian-Hao
Wilson, Iain
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| Comment | Data obtained 2014. SNP location is based on D5 JGI 221 position |
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Alignments
The following features are aligned
Sequence
>CSIRO_D5chr08_50782563 ID=CSIRO_D5chr08_50782563; Name=CSIRO_D5chr08_50782563; organism=Gossypium hirsutum; type=genetic_marker; length=205bp
ATTAATTGTAATTTCATTTTTCTTTTCTACTTTAAGGGAATATTTGAAAT
TATATAATCAAAGAAAATATAAGTTTTATAGACAATTATTAAATATGAGC
[T/C]GAGTTGAATTCTTTAAGAATAATATGGAAACATAAAATAAAATTT
TAAAATTTAGAAGGGGATTAAATTATTTAATTAAATTAATTTTAATATTA
TAGTA
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