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Marker Overview
Name | CSIRO_D5chr06_39160502 |
Alias | Chr06_39160502
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dbSNP ID | N/A |
Type | SNP |
SNP Alleles | G/C |
5' Flanking Sequence | AGCTCTGGTTTTGGTACAAGAATCCACCAATAAAATTTTGTTCTTATTCAATCAGGGAGA
ATTCAACATGTTTTTCCTTGTTTCAAGTAAAGGCTGTTTA |
3' Flanking Sequence | TGCGGTTTTAGGAGAGCAAAAGCCATATAAAGTCATTAGGTAATTTGGCAAAATTTCCAT
GATCCTTTTCTACCTCACAACATATATCCTACATCCTTAG |
Species | Gossypium hirsutum |
Germplasm | Siokra 1-4 MCU-5 (PI 694627)
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Source Type | restriction-site associated DNA RNA-seq and restriction-site associated DNA |
Restriction Enzyme | EcoRI; ApekI; SbfI |
Publication | [view all] |
Contact | Zhu, Qian-Hao Wilson, Iain
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Comment | Data obtained 2014. SNP location is based on D5 JGI 221 position |
Alignments
The following features are aligned
Sequence
>CSIRO_D5chr06_39160502 ID=CSIRO_D5chr06_39160502; Name=CSIRO_D5chr06_39160502; organism=Gossypium hirsutum; type=genetic_marker; length=205bp AGCTCTGGTTTTGGTACAAGAATCCACCAATAAAATTTTGTTCTTATTCA ATCAGGGAGAATTCAACATGTTTTTCCTTGTTTCAAGTAAAGGCTGTTTA [G/C]TGCGGTTTTAGGAGAGCAAAAGCCATATAAAGTCATTAGGTAATT TGGCAAAATTTCCATGATCCTTTTCTACCTCACAACATATATCCTACATC CTTAG
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