|
Marker Overview
Name | CSIRO_D5chr04_31335778 |
Alias | Chr04_31335778
|
dbSNP ID | N/A |
Type | SNP |
SNP Alleles | A/C |
5' Flanking Sequence | AATAAACAAAATATGCACTGATTTTGAATTCTTTTGTGAACTTAAAATAATTTTATTATT
GAATAAATTTTATTATAAAAAACTAATTACTAGTAATTTT |
3' Flanking Sequence | AAAAATTATAACTAATTAACTATATCAACAATTCTAATCAAAATATAATATGTAAGCTAA
AGTGCCCATAAAACCTTGAATACCTATAAAATTTTGAGCG |
Species | Gossypium hirsutum |
Germplasm | Siokra 1-4 MCU-5 (PI 694627)
|
Source Type | restriction-site associated DNA RNA-seq and restriction-site associated DNA |
Restriction Enzyme | EcoRI; ApekI; SbfI |
Publication | [view all] |
Contact | Zhu, Qian-Hao Wilson, Iain
|
Comment | Data obtained 2014. SNP location is based on D5 JGI 221 position |
Alignments
The following features are aligned
Sequence
>CSIRO_D5chr04_31335778 ID=CSIRO_D5chr04_31335778; Name=CSIRO_D5chr04_31335778; organism=Gossypium hirsutum; type=genetic_marker; length=205bp AATAAACAAAATATGCACTGATTTTGAATTCTTTTGTGAACTTAAAATAA TTTTATTATTGAATAAATTTTATTATAAAAAACTAATTACTAGTAATTTT [A/C]AAAAATTATAACTAATTAACTATATCAACAATTCTAATCAAAATA TAATATGTAAGCTAAAGTGCCCATAAAACCTTGAATACCTATAAAATTTT GAGCG
|