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Marker Overview
Name | CSIRO_D5chr01_28225946 |
Alias | Chr01_28225946
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dbSNP ID | N/A |
Type | SNP |
SNP Alleles | C/T |
5' Flanking Sequence | TTTCACTATAATTTTAATTTTTTCTTATTTTGATTTTTATTGAATTCCAGTCTTCCAAAA
ACTTTGTTTTACTTGTGTTTCAAAATTTTATATTCAAATT |
3' Flanking Sequence | TCTTACCCAAAAATTTAAATTTGAATTTTTACTGGTCTTTTTTTGACCAATTTTCACTTG
AAAGAAAGGAAAGCAATATGAATGCAAGTAGGAAATAGAA |
Species | Gossypium hirsutum |
Germplasm | Siokra 1-4 MCU-5 (PI 694627)
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Source Type | restriction-site associated DNA RNA-seq and restriction-site associated DNA |
Restriction Enzyme | EcoRI; ApekI; SbfI |
Publication | [view all] |
Contact | Zhu, Qian-Hao Wilson, Iain
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Comment | Data obtained 2014. SNP location is based on D5 JGI 221 position |
Alignments
The following features are aligned
Sequence
>CSIRO_D5chr01_28225946 ID=CSIRO_D5chr01_28225946; Name=CSIRO_D5chr01_28225946; organism=Gossypium hirsutum; type=genetic_marker; length=205bp TTTCACTATAATTTTAATTTTTTCTTATTTTGATTTTTATTGAATTCCAG TCTTCCAAAAACTTTGTTTTACTTGTGTTTCAAAATTTTATATTCAAATT [C/T]TCTTACCCAAAAATTTAAATTTGAATTTTTACTGGTCTTTTTTTG ACCAATTTTCACTTGAAAGAAAGGAAAGCAATATGAATGCAAGTAGGAAA TAGAA
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