|
Marker Overview
Name | CSIRO_D5chr01_28354067 |
Alias | Chr01_28354067
|
dbSNP ID | N/A |
Type | SNP |
SNP Alleles | T/A |
5' Flanking Sequence | CGCGTCATTGGATGAGAAGCATCGAACACTTACAAATTATTTTTTCCGGTCAAGGCTTGT
TTTGCTAGACAGACTACAACTTGATTTTGATCTCTCGGAA |
3' Flanking Sequence | GTACCGCAATAACCATCGGTTTTCTTGAAATAAAATACTTTGGATACACCTGATTAACAC
TGATTTGCCTCGGTAGAGGTACTTTCAAGTATATCTTTAA |
Species | Gossypium hirsutum |
Germplasm | Siokra 1-4 MCU-5 (PI 694627)
|
Source Type | restriction-site associated DNA RNA-seq and restriction-site associated DNA |
Restriction Enzyme | EcoRI; ApekI; SbfI |
Publication | [view all] |
Contact | Zhu, Qian-Hao Wilson, Iain
|
Comment | Data obtained 2014. SNP location is based on D5 JGI 221 position |
Alignments
The following features are aligned
Sequence
>CSIRO_D5chr01_28354067 ID=CSIRO_D5chr01_28354067; Name=CSIRO_D5chr01_28354067; organism=Gossypium hirsutum; type=genetic_marker; length=205bp CGCGTCATTGGATGAGAAGCATCGAACACTTACAAATTATTTTTTCCGGT CAAGGCTTGTTTTGCTAGACAGACTACAACTTGATTTTGATCTCTCGGAA [T/A]GTACCGCAATAACCATCGGTTTTCTTGAAATAAAATACTTTGGAT ACACCTGATTAACACTGATTTGCCTCGGTAGAGGTACTTTCAAGTATATC TTTAA
|