TAMU_Gb379_003258, TAMU_Gb379_003258 (genetic_marker) Gossypium barbadense

Marker Overview
NameTAMU_Gb379_003258
AliasGb379_003258
dbSNP IDN/A
SNP Array ID
TAMU_CottonSNP63K:i51116Gb
TypeSNP
SNP AllelesA/G
5' Flanking SequenceCGCGGGGAACAGATCCAGTGTGGTACTGCCTAGGAAGAATTACTTTTACG
3' Flanking SequenceGTTCGTCGACGGTAGTGATGGAGGAAGGAAAAAGAGGAATGTAGGATGTT
SpeciesGossypium barbadense
Germplasm3-79
Source TypeRNA
Publication[view all]
ContactStelly, David M.
Commentclass_II: a SNP in which (an) additional polymorphism(s) was found within the same contig, but the additional polymorphism was outside of 50 base pairs (bp) of the marker
Contact
NameDetails
Stelly, David M.
Description:Integrative structural genomics; Cytogenetics; Genetics; Cytogenomics; Radiation hybrid mapping; Chromosome manipulations. ; Wide-cross introgression.; QTL definition. ; Reproductive cytology, genetics and manipulations. ; Fiber cell initiation.
First name:David
Last name:Stelly
Title:Professor
Institution:Texas A&M University
Address:370 Olsen Blvd. , Dept. Soil & Crop Sci., TAMU, College Station, TX 77843-2474
Country:United States
Email:stelly@tamu.edu
Phone:+1 979 845 2745
Fax:+1 979 845 0456
Last update:19-Feb-2007
Libraries
Library NameType
TAMU_CottonSNP63KSNP_chip
Germplasm
Stock NameType
3-79accession
Map Positions
#Map NameLinkage GroupBinPositionLocusMapViewer
1Phytogen 72 x Stoneville 474, consbin (2017)AD_ch03_At.03N/A136.87SNPi51116GbView
23-79 x TM-1, F2 (2015 SNP)AD_ch03_At.03N/A132.3i51116GbView
3Phytogen 72 x Stoneville 474, F2 (2015 SNP)AD_ch03_At.03N/A115.5i51116GbView
Sequence
>TAMU_Gb379_003258 ID=TAMU_Gb379_003258; Name=TAMU_Gb379_003258; organism=Gossypium barbadense; type=genetic_marker; length=105bp
CGCGGGGAACAGATCCAGTGTGGTACTGCCTAGGAAGAATTACTTTTACG
[A/G]GTTCGTCGACGGTAGTGATGGAGGAAGGAAAAAGAGGAATGTAGG
ATGTT