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Marker Overview
Name | NAU3104 |
Genbank ID | CO092723 |
Type | SSR |
Species | Gossypium raimondii |
Source Type | EST |
Repeat Motif | (cgt)6 |
PCR Condition | Annealing temperature: 57 |
Primer 1 | NAU3104_F: TTGTGTTCCCATATCCTCCT |
Primer 2 | NAU3104_R: ATGATGAAGGCGAAAATGAC |
Restriction Enzyme | NotI; EcoRV |
Publication | [view all] |
Contact | Zhang, Tian-Zhen
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Comment | Primer data obtained in 2007-05 |
Cross References
External references for this genetic_marker
Alignments
The following features are aligned
Aligned Feature | Feature Type | Alignment Location |
Chr02 | chromosome | NAU3104:1..296 . Chr02:2312327..2313249 + |
Chr8 | chromosome | NAU3104:1..296 . Chr8:61996664..61997586 - |
Publications
Year | Publication |
2007 | Guo W, Cai C, Wang C, Han Z, Song X, Wang K, Niu X, Wang C, Lu K, Shi B. A microsatellite-based, gene-rich linkage map reveals genome structure, function and evolution in Gossypium. Genetics. 2007; 176(1):527-541. |
Sequence
>NAU3104 ID=NAU3104; Name=NAU3104; organism=Gossypium raimondii; type=genetic_marker; length=242bp TTGTGTTCCCATATCCTCCTCTTCTTCACCCTCTTCATCTTCATCACTGT CGTCATCGTCGTCGTCGTCGTCATCGTCATCGCCGTCGCCTTCATCGTCG TCATCATCGTCTTTAACATCCTCGCCCTCGTCGTCATCAGCTATCAGGAC AGGAGGACCGGATGAGTGAAGAACCTGCACATCGTCATCCTCCTGTCCTT CGTCGTCGTCGTCGTCGTAGTCGTCATTTTCGCCTTCATCAT
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