NAU3104, NAU3104 (genetic_marker) Gossypium raimondii

Marker Overview
NameNAU3104
Genbank IDCO092723
TypeSSR
SpeciesGossypium raimondii
Source TypeEST
Repeat Motif(cgt)6
PCR ConditionAnnealing temperature: 57
Primer 1NAU3104_F: TTGTGTTCCCATATCCTCCT
Primer 2NAU3104_R: ATGATGAAGGCGAAAATGAC
Restriction EnzymeNotI; EcoRV
Publication[view all]
ContactZhang, Tian-Zhen
CommentPrimer data obtained in 2007-05
Contact
NameDetails
Zhang, Tian-Zhen
First name:Tian-Zhen
Last name:Zhang
Title:Professor
Institution:Zhejiang University
Address:College of Agriculture and Biotechnology, Zhejiang University, Hangzhou , 310058 , Zhejiang , China
Country:China
Email:cotton@zju.edu.cn
Phone:+86 571 88982971
Fax:+86 571 88982971
Keywords:cotton genetics and genomics, and breeding
Last update:18-Mar-2022
Cross References
External references for this genetic_marker
DatabaseAccession
DB:genbankCO092723
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Chr02chromosomeNAU3104:1..296 .
Chr02:2312327..2313249 +
Chr8chromosomeNAU3104:1..296 .
Chr8:61996664..61997586 -
Map Positions
#Map NameLinkage GroupBinPositionLocusMapViewer
1AD-genome wide Reference Map (2009)AD_ch01_At.01N/A183nau3104View
2CCRI 12-4 x (AD)5-7, F2 (2015)AD_ch01_At.01N/A136.7nau3104View
3TM-1 x Hai-7124, BC1 (2008)AD_ch01_At.01N/A28.45NAU3104-1400View
4TM-1 x Hai-7124, BC1 (2007)AD_ch01_At.01N/A25.1NAU3104-1400View
5TM-1 x Hai-7124, BC1 (2012)AD_ch01_At.01N/A104.1NAU3104-1400View
Sequence
>NAU3104 ID=NAU3104; Name=NAU3104; organism=Gossypium raimondii; type=genetic_marker; length=242bp
TTGTGTTCCCATATCCTCCTCTTCTTCACCCTCTTCATCTTCATCACTGT
CGTCATCGTCGTCGTCGTCGTCATCGTCATCGCCGTCGCCTTCATCGTCG
TCATCATCGTCTTTAACATCCTCGCCCTCGTCGTCATCAGCTATCAGGAC
AGGAGGACCGGATGAGTGAAGAACCTGCACATCGTCATCCTCCTGTCCTT
CGTCGTCGTCGTCGTCGTAGTCGTCATTTTCGCCTTCATCAT