NAU2488, NAU2488 (genetic_marker) Gossypium hirsutum

Marker Overview
NameNAU2488
Genbank IDDT053285
TypeSSR
SpeciesGossypium hirsutum
GermplasmXuzhou 142
Xuzhou 142
Source SequenceDT053285.1
Source TypeEST
Repeat MotifATC(4)
PCR ConditionAnnealing temperature: 57
Primer 1NAU2488_F: AACTCATTTCATAGGTTGACCA
Primer 2NAU2488_R: GGTGGACTGCTTTTCAAGTT
Product Length236
Publication[view all]
ContactZhang, Tian-Zhen
CommentPrimer data obtained in 2007-05
Contact
NameDetails
Zhang, Tian-Zhen
First name:Tian-Zhen
Last name:Zhang
Title:Professor
Institution:Zhejiang University
Address:College of Agriculture and Biotechnology, Zhejiang University, Hangzhou , 310058 , Zhejiang , China
Country:China
Email:cotton@zju.edu.cn
Phone:+86 571 88982971
Fax:+86 571 88982971
Keywords:cotton genetics and genomics, and breeding
Last update:18-Mar-2022
Cross References
External references for this genetic_marker
DatabaseAccession
DB:genbankDT053285
Germplasm
Stock NameType
Xuzhou 142accession
Xuzhou 142accession
Relationships

The following sequence_feature feature(s) derives from this genetic_marker:

Feature NameUnique NameSpeciesType
DT053285.1DT053285.1Gossypium hirsutumsequence_feature


Map Positions
#Map NameLinkage GroupBinPositionLocusMapViewer
1AD-genome wide Reference Map (2009)AD_ch18_Dt.13N/A25nau2488View
2TM-1 x Hai-7124, BC1 (2007)AD_ch18_Dt.13N/A18.1NAU2488-250View
3TM-1 x Hai-7124, BC1 (2008)AD_ch18_Dt.13N/A18.14NAU2488-250View
4TM-1 x Hai-7124, BC1 (2012)AD_ch18_Dt.13N/A99.2NAU2488-250View
5PD 94042 x (AD)4-08, F2 (2016)AD_ch18_Dt.13N/A109NAU2488View
Sequence
>NAU2488 ID=NAU2488; Name=NAU2488; organism=Gossypium hirsutum; type=genetic_marker; length=236bp
AACTCATTTCATAGGTTGACCATTATCATCATCATCAAAGGTTATATTNT
GGGCAAACCCTTTTACCAAGGGAAAATTTTTCAATGGCGATTTAACCTTT
TTAAAGAGAATATGGGAATCAAAATGTTCTACAGATTCCAATGGATCAAT
TGAGAGAGTCTGCAATGGGTGGACGGACCATTAGCTGTTTACTTTTTGTT
GACCTTCACTCAAAATAACTTGAAAAGCAGTCCACC