NAU2473, NAU2473 (genetic_marker) Gossypium hirsutum

Marker Overview
NameNAU2473
Genbank IDDT052730
TypeSSR
SpeciesGossypium hirsutum
GermplasmXuzhou 142
Xuzhou 142
Source SequenceDT052730.1
Source TypeEST
Repeat MotifCA(8)
PCR ConditionAnnealing temperature: 57
Primer 1NAU2473_F: CTTTCCATTTCCAAAGTTGC
Primer 2NAU2473_R: CGAATTTAATGCAATGAGCA
Product Length220
Publication[view all]
ContactZhang, Tian-Zhen
CommentPrimer data obtained in 2007-05
Contact
NameDetails
Zhang, Tian-Zhen
First name:Tian-Zhen
Last name:Zhang
Title:Professor
Institution:Zhejiang University
Address:College of Agriculture and Biotechnology, Zhejiang University, Hangzhou , 310058 , Zhejiang , China
Country:China
Email:cotton@zju.edu.cn
Phone:+86 571 88982971
Fax:+86 571 88982971
Keywords:cotton genetics and genomics, and breeding
Last update:18-Mar-2022
Cross References
External references for this genetic_marker
DatabaseAccession
DB:genbankDT052730
Alignments
The following features are aligned
Feature Name Type LocationAnalysisReference
Chr02chromosomeChr02:33975944..33976162 -Gossypium gossypioides (D6) genome ISU_v1n/a
Germplasm
Stock NameType
Xuzhou 142accession
Xuzhou 142accession
Relationships

The following sequence_feature feature(s) derives from this genetic_marker:

Feature NameUnique NameSpeciesType
DT052730.1DT052730.1Gossypium hirsutumsequence_feature


Map Positions
#Map NameLinkage GroupBinPositionLocusMapViewer
1AD-genome wide Reference Map (2009)AD_ch06_At.06N/A162nau2473View
2TM-1 x Hai-7124, BC1 (2007)AD_ch06_At.06N/A96.2NAU2473-800View
3TM-1 x Hai-7124, BC1 (2008)AD_ch06_At.06N/A61.81NAU2473-800View
4TM-1 x Hai-7124, BC1 (2012)AD_ch06_At.06N/A59.8NAU2473-800View
Sequence
>NAU2473 ID=NAU2473; Name=NAU2473; organism=Gossypium hirsutum; type=genetic_marker; length=220bp
CTTTCCATTTCCAAAGTTGCAAAACATAATTAACTTCTACGCTACCATAT
GCTTACAAATGACCCATATTGTAATAATATTTTGAGGGTCATTTAGACAT
TCTAATTTTACACTTCTTAAAAAGTTTTTNATTTAAAGAAATATATATTT
TTTCCTTTAATGCACACACACACACACAAACAAAGAAGTTTCCTCCAACT
TGCTCATTGCATTAAATTCG