NAU2000, NAU2000 (genetic_marker) Gossypium hirsutum

Marker Overview
NameNAU2000
Genbank IDDR041734
TypeSSR
SpeciesGossypium hirsutum
Germplasm7235
7235
Source SequenceDR041734.1
Source TypeEST
Repeat MotifCT(6)
PCR ConditionAnnealing temperature: 57
Primer 1NAU2000_F: GAAAATGTTCCCCTCTTGTG
Primer 2NAU2000_R: CTAAAGGGGACCAAAGCTG
Product Length250
Publication[view all]
ContactZhang, Tian-Zhen
CommentPrimer data obtained in 2007-05
Contact
NameDetails
Zhang, Tian-Zhen
First name:Tian-Zhen
Last name:Zhang
Title:Professor
Institution:Zhejiang University
Address:College of Agriculture and Biotechnology, Zhejiang University, Hangzhou , 310058 , Zhejiang , China
Country:China
Email:cotton@zju.edu.cn
Phone:+86 571 88982971
Fax:+86 571 88982971
Keywords:cotton genetics and genomics, and breeding
Last update:18-Mar-2022
Cross References
External references for this genetic_marker
DatabaseAccession
DB:genbankDR041734
Germplasm
Stock NameType
7235accession
7235accession
Relationships

The following sequence_feature feature(s) derives from this genetic_marker:

Feature NameUnique NameSpeciesType
DR041734.1DR041734.1Gossypium hirsutumsequence_feature


Map Positions
#Map NameLinkage GroupBinPositionLocusMapViewer
1AD-genome wide Reference Map (2009)AD_ch05_At.05N/A18nau2000View
2TM-1 x Hai-7124, BC1 (2007)AD_ch05_At.05N/A30.5NAU2000-3000View
3TM-1 x Hai-7124, BC1 (2008)AD_ch05_At.05N/A24.74NAU2000-3000View
4TM-1 x Hai-7124, BC1 (2012)AD_ch05_At.05N/A184.5NAU2000-3000View
5TM-1 x (TX-0256 + TX-1046), CSIL (2016)AD_ch05_At.05N/A35NAU2000bView
Sequence
>NAU2000 ID=NAU2000; Name=NAU2000; organism=Gossypium hirsutum; type=genetic_marker; length=250bp
GAAAATGTTCCCCTCTTGTGTCCACCCACCCTCTCTCTCTCTTGCTTTTT
TTTTCCCTTCCTTTTTTTGTTTATTCAATTTGCTTGTGCAAACTAATAAA
AGCTCCTTATAGCAAGAAGAAGAGGAAGAAGAAGAGCTACAAACAAGTGG
AAAAAACAAAACAAAAAAAAAAAAAAAAAAAAACATGTCGGCCGCCTCGG
CCTATGTGCGGCCGCCACCGCGGTGGAGCTCCAGCTTTGGTCCCCTTTAG