NAU0944, NAU0944 (genetic_marker) Gossypium arboreum

Marker Overview
NameNAU0944
AliasNAU944
Genbank IDBQ409443
TypeSSR
SpeciesGossypium arboreum
GermplasmAKA 8400
AKA 8400
Source TypeEST
Repeat Motif(CACAGC)3
PCR ConditionAnnealing temperature: 57
Primer 1NAU944_F: TAGTCAAAGCCACAGCCACA
Primer 2NAU944_R: CTCTTTGAGGCCAATTGTTT
Product Length193
Restriction EnzymeEcoRI; XhoI
ContactZhang, Tian-Zhen
CommentPrimer data obtained in 2007-05
Contact
NameDetails
Zhang, Tian-Zhen
First name:Tian-Zhen
Last name:Zhang
Title:Professor
Institution:Zhejiang University
Address:College of Agriculture and Biotechnology, Zhejiang University, Hangzhou , 310058 , Zhejiang , China
Country:China
Email:cotton@zju.edu.cn
Phone:+86 571 88982971
Fax:+86 571 88982971
Keywords:cotton genetics and genomics, and breeding
Last update:18-Mar-2022
Cross References
External references for this genetic_marker
DatabaseAccession
DB:genbankBQ409443
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Chr13_CRI-A2_v1.0.a1chromosomeChr13_CRI-A2_v1.0.a1:113821882..113822074 -
CM017700.1chromosomeCM017700.1:101030459..101030657 -
Chr13chromosomeChr13:111787623..111787815 -
Germplasm
Stock NameType
AKA 8400accession
AKA 8400accession
Map Positions
#Map NameLinkage GroupBinPositionLocusMapViewer
1JLZM x ZJXSLS, F2 (2008)A_JZ_A07N/A153.7NAU944View
2CCRI 12-4 x (AD)5-7, F2 (2015)AD_ch13_At.13N/A65.4NAU944View
Sequence
>NAU0944 ID=NAU0944; Name=NAU0944; organism=Gossypium arboreum; type=genetic_marker; length=193bp
TAGTCAAAGCCACAGCCACAGGCACAGCCACAGCCACAGCCAGTACTGAC
ATTTTCATTAGGCTCATAAAAGAACACTACCAAATTTCGTGCCTTTCAAA
GTAATCGAAGGGGATTCATATATTCCCAAAAATACAAAATCTTTAGAGGG
GAAATAACCCAAAAAGAAAAGGAAAACAATTGGCCTCAAAGAG