MGHES0027, MGHES0027 (genetic_marker) Gossypium hirsutum

Marker Overview
NameMGHES0027
AliasMGHES27
MGHES-27
MGHES-027
Genbank IDAW187804
TypeSSR
SpeciesGossypium hirsutum
GermplasmAcala Maxxa
Source SequenceAW187804
Source TypeEST
Repeat Motif(TCT)7; (AAC)4; (TTC)3
PCR ConditionAnnealing temperature: 55
Primer 1MGHES27_F: TAATGGCGGCTAAACCTTCA
Primer 2MGHES27_R: GGGGTTGCCTTCTTCTGTAG
Product Length275
Publication[view all]
CommentPrimer data obtained in 2005
Cross References
External references for this genetic_marker
DatabaseAccession
DB:genbankAW187804
Publications
YearPublication
2004EST-SSR: A new class of genetic markers in cotton.
Germplasm
Stock NameType
Acala Maxxaaccession
Relationships

The following sequence_feature feature(s) derives from this genetic_marker:

Feature NameUnique NameSpeciesType
AW187804AW187804Gossypium hirsutumsequence_feature


Map Positions
#Map NameLinkage GroupBinPositionLocusMapViewer
1CCRI-36 x Hai-7124, F2 (2007)AD_ch10_At.10N/A0MGHES27View
2Emian-22 x 3-79, BC1 (2011)AD_ch10_At.10N/A128.8MGHES27View
3CCRI 12-4 x (AD)5-7, F2 (2015)AD_ch10_At.10N/A122.6MGHES27View
4AD-genome wide Reference Map (2009)AD_ch10_At.10N/A90mghes0027View
Sequence
>MGHES0027 ID=MGHES0027; Name=MGHES0027; organism=Gossypium hirsutum; type=genetic_marker; length=275bp
TAATGGCGGCTAAACCTTCAATTCTCTTCTTCTTCTTCTTCTTCTGCCAT
AGTTTTCCTTTTTATCTTTTAAACAGACAAAAAAAAAAAGAGTTTATATA
TAACATTCCTTTTCCTTTCTTTTCCTTCCATATTTTTACTTTCTTTGCTC
CTATCCTTTCCAAATGTTTTTCTTCTTCTTTCTCCTTTCTTTCGTCCTCT
CTTCTTATTCTTATTCTTTTCTTTTCACTATAAAAAACTCCATAAACAAC
AACAACTACAGAAGAAGGCAACCCC