CIR0044, CIR0044 (genetic_marker) Gossypium hirsutum

Marker Overview
NameCIR0044
AliasCIR44
CIR044
Genbank IDAJ566993
TypeSSR
SpeciesGossypium hirsutum
GermplasmGuazuncho-2
Source SequenceAJ566993
Source Typegenomic
Repeat Motif(AC)17
PCR ConditionAnnealing temperature: 55
Primer 1CIR044_F: AATGCTCTCAGGCAAA
Primer 2CIR044_R: ATTAGGCAACAGGCAA
Product Length178
Publication[view all]
CommentPrimer data obtained in 2005
Cross References
External references for this genetic_marker
DatabaseAccession
DB:genbankAJ566993
Germplasm
Stock NameType
Guazuncho-2accession
Relationships

The following sequence_feature feature(s) derives from this genetic_marker:

Feature NameUnique NameSpeciesType
AJ566993AJ566993Gossypium hirsutumsequence_feature


Map Positions
#Map NameLinkage GroupBinPositionLocusMapViewer
1AD-genome wide Reference Map (2009)AD_ch23_Dt.09N/A126cir0044View
2TM-1 x Hai-7124, BC1 (2007)AD_ch23_Dt.09N/A106.5CIR044-500View
3TM-1 x Hai-7124, BC1 (2008)AD_ch23_Dt.09N/A105.99CIR044-500View
4TM-1 x Hai-7124, BC1 (2012)AD_ch23_Dt.09N/A102.6CIR044-500View
Sequence
>CIR0044 ID=CIR0044; Name=CIR0044; organism=Gossypium hirsutum; type=genetic_marker; length=178bp
AATGCTCTCAGGCAAAACAAACAACACACACACACACACACACACACACA
CACACACAGGCCATTTAAGCTTTCTCCGTAAATTTCCTAACTTTTGAATT
TTGTTTGTAAAAACTTCTCATCCTGCACTAGAAGACAATGGTCTGTCAGA
GAGGAGACTGTTTTGCCTGTTGCCTAAT