CGR5362, CGR5362 (genetic_marker) Gossypium hirsutum

Marker Overview
NameCGR5362
Genbank IDGQ393436
TypeSSR
SpeciesGossypium hirsutum
GermplasmDeltapine 33 B
Source SequenceMONCS0401
Source Typegenomic
PCR ConditionAnnealing temperature: 55
Primer 1CGR5362_F: AACATGCCGATGGAAGAAAC
Primer 2CGR5362_R: CATAGAACCTCTTGGGACCG
Publication[view all]
ContactMonsanto
CommentPrimer data obtained in 2009-05
Contact
NameDetails
Monsanto
Country:United States
Cross References
External references for this genetic_marker
DatabaseAccession
DB:genbankGQ393436
Alignments
The following features are aligned
Feature Name Type LocationAnalysisReference
Chr10chromosomeCGR5362:8..487 .
Chr10:53770180..53770658 +		n/a
Chr10chromosomeCGR5362:8..487 .
Chr10:38656375..38656853 +		n/a
Germplasm
Stock NameType
Deltapine 33 Baccession
Relationships

The following sequence_feature feature(s) derives from this genetic_marker:

Feature NameUnique NameSpeciesType
MONCS0401MONCS0401Gossypium hirsutumsequence_feature


Map Positions
#Map NameLinkage GroupBinPositionLocusMapViewer
1Yumian-1 x 7235, RIL (2015)AD_ch25_Dt.06N/A41.5CGR5362View
2Monsanto SSR Bin Map, (2009)AD_ch25_Dt.06N/A21CGR5362View
3(YM1 x CCRI35) x (YM1 x 7235), 4WC (2012)AD_ch25_Dt.06N/A4.3MON_CGR5362View
4901-001 x sGK156, F2 (2019)AD_ch25_Dt.06N/A50.82CGR5362cView
5901-001 x sGK156, F2 (2019)AD_ch25_Dt.06N/A53.84CGR5362aView
6901-001 x sGK156, F2 (2019)AD_ch25_Dt.06N/A56.28CGR5362bView
Sequence
>CGR5362 ID=CGR5362; Name=CGR5362; organism=Gossypium hirsutum; type=genetic_marker; length=125bp
AACATGCCGATGGAAGAAACTATGGGTTTTACATATTGAAGTGGTATGGA
TGTATGTATGTATGTATGTGTATGTGCATGCATGCATGCATGCACGTATG
GTTTTCGGTCCCAAGAGGTTCTATG