PGML0838, PGML0838 (genetic_marker) Gossypium raimondii

Marker Overview
NamePGML0838
Genbank IDN/A
TypeSSR
SpeciesGossypium raimondii
Repeat Motif(GAAAA)3
Primer 1PGML0838_F: GAATGCAAACAATAACAATGATTT
Primer 2PGML0838_R: AAAGCAGAGACGAGGTTCCA
Product Length319
Publication[view all]
CommentBAC_ID=FITB4716.y2
Alignments
The following features are aligned
Feature Name Type LocationAnalysisReference
D06chromosomeD06:16805796..16806132 -Gossypium hirsutum (AD1) 'TM-1' genome UTX-JGI-Interim-release_v1.1n/a
CM018220.1chromosomeCM018220.1:15672564..15672900 -Gossypium barbadense (AD2) '3-79' genome HGS_v1.1n/a
D5_06chromosomeD5_06:15737944..15738261 -Gossypium raimondii (D5) 'D5-4' genome NSF_v1n/a
Dt_chr10chromosomeDt_chr10:14377498..14377834 +Gossypium hirsutum (AD1) 'TM-1' genome CGP-BGI_v1n/a
D06chromosomeD06:16017444..16017780 -Gossypium hirsutum (AD1) 'TM-1' genome NAU-NBI_v1.1n/a
Ghir_D06chromosomeGhir_D06:16537823..16538159 -Gossypium hirsutum (AD1) 'TM-1' genome HAU_v1 / v1.1n/a
D06chromosomeD06:16083629..16083965 -Gossypium hirsutum (AD1) 'TM-1' genome ZJU-improved_v2.1_a1n/a
D06chromosomeD06:16519641..16519976 -Gossypium hirsutum (AD1) 'TM-1' genome CRI_v1n/a
D06chromosomeD06:16041545..16041881 -Gossypium hirsutum (AD1) 'ZM24' genome CRI_v1n/a
Gbar_D06chromosomeGbar_D06:15833157..15833493 -Gossypium barbadense (AD2) '3-79' genome HAU_v2_a1n/a
D06chromosomeD06:15579621..15579957 -Gossypium barbadense (AD2) 'H7124' genome ZJU_v1.1_a1n/a
CM017628.1chromosomeCM017628.1:16345107..16345444 -Gossypium tomentosum (AD3) genome HGS_v1.1n/a
CM017654.1chromosomeCM017654.1:16065426..16065762 -Gossypium mustelinum (AD4) genome JGI_v1.1n/a
CM017706.1chromosomeCM017706.1:15872295..15872631 -Gossypium darwinii (AD5) genome HGS_v1.1n/a
D06chromosomeD06:16700435..16700771 -Gossypium hirsutum (AD1) 'TM-1' genome UTX_v2.1n/a
Chr06chromosomeChr06:15528652..15528969 -Gossypium raimondii (D5) 'Grai D502' genome HAU_v1n/a
Chr10chromosomeChr10:16434293..16434612 -Gossypium thurberi (D1-5) genome CRI_v1n/a
Chr10chromosomeChr10:11380599..11380937 -Gossypium aridum (D4) genome ISU_v1n/a
Sequence
>PGML0838 ID=PGML0838; Name=PGML0838; organism=Gossypium raimondii; type=genetic_marker; length=319bp
GAATGCAAACAATAACAATGATTTTTGCAGCAAAAAGAAAAGAAAAGAAA
AAGAAATGGTTAAATAAATCGAGTAATTAATGAAAGAAAAAAGAGAGAGA
CTAGTGTTTGAATTGATTAGGGAAAATGGGGGAGGGAGAAAGGGAGTAAA
AGAAAAGCGCGGCGATAGTGAACTATTTATAATTGAAAATTGTTAAAAGA
AGAAGGGATTTATTGAAGGATATCTAGAAATTAGGAGAATCTGAGGGATT
TCATAAAATGATGTTTACTTATAATAATAGGTAAATGAATTACAAATTTT
GGAACCTCGTCTCTGCTTT