PGML0819, PGML0819 (genetic_marker) Gossypium raimondii

Marker Overview
NamePGML0819
Genbank IDN/A
TypeSSR
SpeciesGossypium raimondii
Repeat Motif(AT)9
Primer 1PGML0819_F: AGGGATCCCGGCTTAAGAT
Primer 2PGML0819_R: AAAGATTGAAGCAACTCGGA
Product Length224
Publication[view all]
CommentBAC_ID=FITB1322.x1
Alignments
The following features are aligned
Feature Name Type LocationAnalysisReference
D11chromosomeD11:38235031..38235248 +Gossypium hirsutum (AD1) 'TM-1' genome UTX-JGI-Interim-release_v1.1n/a
CM018225.1chromosomeCM018225.1:35787778..35787997 +Gossypium barbadense (AD2) '3-79' genome HGS_v1.1n/a
D5_11chromosomeD5_11:31208920..31209143 -Gossypium raimondii (D5) 'D5-4' genome NSF_v1n/a
D10_11chromosomeD10_11:35389006..35389221 +Gossypium turneri (D10) genome NSF_v1_a2n/a
Dt_chr7chromosomeDt_chr7:42367804..42368021 -Gossypium hirsutum (AD1) 'TM-1' genome CGP-BGI_v1n/a
D11chromosomeD11:36303595..36303812 +Gossypium hirsutum (AD1) 'TM-1' genome NAU-NBI_v1.1n/a
D11chromosomeD11:36302625..36302842 +Gossypium hirsutum (AD1) 'TM-1' genome NAU-NBI_v1.1n/a
Ghir_D11chromosomeGhir_D11:37035511..37035726 +Gossypium hirsutum (AD1) 'TM-1' genome HAU_v1 / v1.1n/a
D11chromosomeD11:37090851..37091068 +Gossypium hirsutum (AD1) 'TM-1' genome CRI_v1n/a
D11chromosomeD11:36586607..36586824 +Gossypium hirsutum (AD1) 'ZM24' genome CRI_v1n/a
Gbar_D11chromosomeGbar_D11:36107331..36107550 +Gossypium barbadense (AD2) '3-79' genome HAU_v2_a1n/a
D11chromosomeD11:35913812..35914031 +Gossypium barbadense (AD2) 'H7124' genome ZJU_v1.1_a1n/a
CM017633.1chromosomeCM017633.1:36135745..36135962 +Gossypium tomentosum (AD3) genome HGS_v1.1n/a
CM017659.1chromosomeCM017659.1:36921411..36921628 +Gossypium mustelinum (AD4) genome JGI_v1.1n/a
CM017711.1chromosomeCM017711.1:35987579..35987798 +Gossypium darwinii (AD5) genome HGS_v1.1n/a
D11chromosomeD11:37419569..37419786 +Gossypium hirsutum (AD1) 'TM-1' genome UTX_v2.1n/a
Chr11chromosomeChr11:29199167..29199390 -Gossypium raimondii (D5) 'Grai D502' genome HAU_v1n/a
Chr07chromosomeChr07:36290997..36291215 +Gossypium thurberi (D1-5) genome CRI_v1n/a
Chr_07chromosomeChr_07:28022778..28022993 +Gossypium harknessii (D2-2) genome ISU_v1n/a
Chr07chromosomeChr07:36217126..36217345 +Gossypium davidsonii (D3d-8) genome CRI_v1n/a
Sequence
>PGML0819 ID=PGML0819; Name=PGML0819; organism=Gossypium raimondii; type=genetic_marker; length=224bp
AGGGATCCCGGCTTAAGATTTATAATAAATGTATAAATTGTTATATATTT
ATATAAACTTCGATATATATATATATATATTAATTTAATCATTTGTGTTG
TCTATATTTATTGCATTTGTATTGTTTTTGTAGTATTATATTTTTATAAG
AAATGTCAAATTACTTTGAAGACGGAAGTCTAGCTTAGCAATAGAAAGAA
GTTATCCGAGTTGCTTCAATCTTT