PGML0812, PGML0812 (genetic_marker) Gossypium raimondii

Marker Overview
NamePGML0812
Genbank IDN/A
TypeSSR
SpeciesGossypium raimondii
Repeat Motif(AAACA)3
Primer 1PGML0812_F: TGCTTCAAGAGTTGGGTCAA
Primer 2PGML0812_R: TAGACATGAATGGGTGGCAA
Product Length360
Publication[view all]
CommentBAC_ID=FITB8079.y2
Alignments
The following features are aligned
Feature Name Type LocationAnalysisReference
D02chromosomeD02:28423101..28423460 -Gossypium hirsutum (AD1) 'TM-1' genome UTX-JGI-Interim-release_v1.1n/a
CM018216.1chromosomeCM018216.1:26227852..26228211 -Gossypium barbadense (AD2) '3-79' genome HGS_v1.1n/a
D5_03chromosomeD5_03:38011243..38011602 +Gossypium raimondii (D5) 'D5-4' genome NSF_v1n/a
Dt_chr5chromosomeDt_chr5:58653761..58654120 +Gossypium hirsutum (AD1) 'TM-1' genome CGP-BGI_v1n/a
D02chromosomeD02:27682239..27682598 -Gossypium hirsutum (AD1) 'TM-1' genome NAU-NBI_v1.1n/a
Ghir_D02chromosomeGhir_D02:27036789..27037148 -Gossypium hirsutum (AD1) 'TM-1' genome HAU_v1 / v1.1n/a
D02chromosomeD02:27249233..27249592 -Gossypium hirsutum (AD1) 'TM-1' genome ZJU-improved_v2.1_a1n/a
D02chromosomeD02:27141671..27142030 -Gossypium hirsutum (AD1) 'TM-1' genome CRI_v1n/a
D02chromosomeD02:27147425..27147784 -Gossypium hirsutum (AD1) 'ZM24' genome CRI_v1n/a
Gbar_D02chromosomeGbar_D02:26633279..26633638 -Gossypium barbadense (AD2) '3-79' genome HAU_v2_a1n/a
D02chromosomeD02:26654778..26655137 -Gossypium barbadense (AD2) 'H7124' genome ZJU_v1.1_a1n/a
CM017624.1chromosomeCM017624.1:27038121..27038480 -Gossypium tomentosum (AD3) genome HGS_v1.1n/a
CM017650.1chromosomeCM017650.1:28159583..28159942 -Gossypium mustelinum (AD4) genome JGI_v1.1n/a
CM017702.1chromosomeCM017702.1:26406085..26406444 -Gossypium darwinii (AD5) genome HGS_v1.1n/a
D02chromosomeD02:27835587..27835946 -Gossypium hirsutum (AD1) 'TM-1' genome UTX_v2.1n/a
Chr03chromosomeChr03:24911387..24911746 -Gossypium raimondii (D5) 'Grai D502' genome HAU_v1n/a
Chr05chromosomeChr05:26600523..26600883 -Gossypium thurberi (D1-5) genome CRI_v1n/a
Chr05chromosomeChr05:15511977..15512336 -Gossypium gossypioides (D6) genome ISU_v1n/a
Chr05chromosomeChr05:19579997..19580359 -Gossypium lobatum (D7) genome ISU_v1n/a
E03chromosomeE03:28258979..28259335 -Gossypium stocksii (E1) genome NSF_v1n/a
Sequence
>PGML0812 ID=PGML0812; Name=PGML0812; organism=Gossypium raimondii; type=genetic_marker; length=360bp
TGCTTCAAGAGTTGGGTCAAACCAATTGAATTGAAACAAATAACTAGAAA
AAGTTTTTTCTCCTTTTAGGGTGAAAACAAAAATTCTCTCTTTTTAATAG
AAACCGGTAAAAGTGTTATTCCAAAAAATATATATGTAATAGTTGAGAAT
AAATTCTCTATTTTTTAGAAGAATAACAATCTCTCAAAGTTGTGTTCATA
GCTCTATCGATGCCATCTATTTATAGGAAGAGAATGTAGAACCCTTGTTG
AGTTGTAGTGATTTATTTCAAAAAACAAAACAAAACATCCTATTTAGAAT
AGGTCTAGGGTGGACGACACACCCTAGTATTCCTACTAGGTTGCCACCCA
TTCATGTCTA