PGML0807, PGML0807 (genetic_marker) Gossypium raimondii

Marker Overview
NamePGML0807
Genbank IDN/A
TypeSSR
SpeciesGossypium raimondii
Repeat Motif(ATT)10
Primer 1PGML0807_F: TGATCTGCAGTGTAGTTTACCCTT
Primer 2PGML0807_R: TGTCGTATGCCATGTTAGCAA
Product Length246
Publication[view all]
CommentBAC_ID=FITB8244.y2
Alignments
The following features are aligned
Feature Name Type LocationAnalysisReference
D05chromosomeD05:48483890..48484150 +Gossypium hirsutum (AD1) 'TM-1' genome UTX-JGI-Interim-release_v1.1n/a
CM018219.1chromosomeCM018219.1:47976273..47976515 +Gossypium barbadense (AD2) '3-79' genome HGS_v1.1n/a
D5_05chromosomeD5_05:44004620..44004863 +Gossypium raimondii (D5) 'D5-4' genome NSF_v1n/a
Dt_chr9chromosomeDt_chr9:22926441..22926704 +Gossypium hirsutum (AD1) 'TM-1' genome CGP-BGI_v1n/a
D05chromosomeD05:47306698..47306958 +Gossypium hirsutum (AD1) 'TM-1' genome NAU-NBI_v1.1n/a
D05chromosomeD05:49336319..49336678 +Gossypium hirsutum (AD1) 'TM-1' genome ZJU-improved_v2.1_a1n/a
D05chromosomeD05:48777641..48777901 +Gossypium hirsutum (AD1) 'ZM24' genome CRI_v1n/a
Gbar_D05chromosomeGbar_D05:44334803..44335042 -Gossypium barbadense (AD2) '3-79' genome HAU_v2_a1n/a
D05chromosomeD05:50236680..50236919 +Gossypium barbadense (AD2) 'H7124' genome ZJU_v1.1_a1n/a
CM017627.1chromosomeCM017627.1:49158004..49158243 +Gossypium tomentosum (AD3) genome HGS_v1.1n/a
CM017653.1chromosomeCM017653.1:50344694..50344942 +Gossypium mustelinum (AD4) genome JGI_v1.1n/a
CM017705.1chromosomeCM017705.1:49487532..49487771 +Gossypium darwinii (AD5) genome HGS_v1.1n/a
D05chromosomeD05:50784057..50784317 +Gossypium hirsutum (AD1) 'TM-1' genome UTX_v2.1n/a
Chr05chromosomeChr05:44770393..44770638 +Gossypium raimondii (D5) 'Grai D502' genome HAU_v1n/a
Chr_09chromosomeChr_09:35428515..35428794 +Gossypium harknessii (D2-2) genome ISU_v1n/a
Chr09chromosomeChr09:47937556..47937826 +Gossypium davidsonii (D3d-8) genome CRI_v1n/a
Chr09chromosomeChr09:33936182..33936577 +Gossypium lobatum (D7) genome ISU_v1n/a
Sequence
>PGML0807 ID=PGML0807; Name=PGML0807; organism=Gossypium raimondii; type=genetic_marker; length=246bp
TGATCTGCAGTGTAGTTTACCCTTATATTGTTAATATTATTATTATTATT
ATTATTATTATTATTATCTCTTAACTATGTTGATGTGGCATACATATGTA
TGTCACGTTAACAATTAAATAATTTTTTAAATATAAAAATTATTTTTAAA
ATTAAAAAAGTATAAAAAATGTAAAAATATAACAAATTATTTTTAATATT
TTAAAATATTTGAAAAGATAATTAGTTGCTAACATGGCATACGACA