PGML0805, PGML0805 (genetic_marker) Gossypium raimondii

Marker Overview
NamePGML0805
Genbank IDN/A
TypeSSR
SpeciesGossypium raimondii
Repeat Motif(TAAA)3,(ATTTT)3
Primer 1PGML0805_F: TGATTGCAACACCAATCACA
Primer 2PGML0805_R: TCTTAATTGTAGGCGAGAAATCAA
Product Length183
Publication[view all]
CommentBAC_ID=FITB8443.y2
Alignments
The following features are aligned
Feature Name Type LocationAnalysisReference
D05chromosomeD05:2068809..2068993 +Gossypium hirsutum (AD1) 'TM-1' genome UTX-JGI-Interim-release_v1.1n/a
CM018219.1chromosomeCM018219.1:1866696..1866881 +Gossypium barbadense (AD2) '3-79' genome HGS_v1.1n/a
D5_05chromosomeD5_05:1751556..1751738 +Gossypium raimondii (D5) 'D5-4' genome NSF_v1n/a
Dt_chr9chromosomeDt_chr9:69667090..69667275 -Gossypium hirsutum (AD1) 'TM-1' genome CGP-BGI_v1n/a
D05chromosomeD05:1911122..1911307 +Gossypium hirsutum (AD1) 'TM-1' genome NAU-NBI_v1.1n/a
Ghir_D05chromosomeGhir_D05:2044170..2044355 +Gossypium hirsutum (AD1) 'TM-1' genome HAU_v1 / v1.1n/a
D05chromosomeD05:1953131..1953316 +Gossypium hirsutum (AD1) 'TM-1' genome CRI_v1n/a
D05chromosomeD05:1962581..1962766 +Gossypium hirsutum (AD1) 'ZM24' genome CRI_v1n/a
Gbar_D05chromosomeGbar_D05:1923828..1924013 +Gossypium barbadense (AD2) '3-79' genome HAU_v2_a1n/a
D05chromosomeD05:2046019..2046204 +Gossypium barbadense (AD2) 'H7124' genome ZJU_v1.1_a1n/a
CM017627.1chromosomeCM017627.1:1920990..1921175 +Gossypium tomentosum (AD3) genome HGS_v1.1n/a
CM017653.1chromosomeCM017653.1:1895282..1895477 +Gossypium mustelinum (AD4) genome JGI_v1.1n/a
CM017705.1chromosomeCM017705.1:1896369..1896554 +Gossypium darwinii (AD5) genome HGS_v1.1n/a
D05chromosomeD05:1951857..1952042 +Gossypium hirsutum (AD1) 'TM-1' genome UTX_v2.1n/a
Chr05chromosomeChr05:1758024..1758206 +Gossypium raimondii (D5) 'Grai D502' genome HAU_v1n/a
B_05chromosomeB_05:83943654..83943840 -Gossypium anomalum (B1) genome NSF_v1n/a
Chr09chromosomeChr09:1856702..1856893 +Gossypium thurberi (D1-5) genome CRI_v1n/a
Chr09chromosomeChr09:1723880..1724071 +Gossypium aridum (D4) genome ISU_v1n/a
E05chromosomeE05:2359068..2359254 +Gossypium stocksii (E1) genome NSF_v1n/a
Sequence
>PGML0805 ID=PGML0805; Name=PGML0805; organism=Gossypium raimondii; type=genetic_marker; length=183bp
TGATTGCAACACCAATCACAATTATAATTATAATCATAATTAATATATTA
ATAAATAAATAAATTATAACTATATATAAAACGAAAATACTTTTCATGTA
CAGTCTTTTATTTTATTTTATTTTTTTGCATTTTATTTGAAAATAGTCCG
ATATCATTTTTGATTTCTCGCCTACAATTAAGA