PGML0803, PGML0803 (genetic_marker) Gossypium raimondii

Marker Overview
NamePGML0803
Genbank IDN/A
TypeSSR
SpeciesGossypium raimondii
Repeat Motif(ATTTA)3
Primer 1PGML0803_F: TTGTTTCTCTTGTTTCGGTGG
Primer 2PGML0803_R: AGTGGACGATTTGTTCTGGC
Product Length148
Publication[view all]
CommentBAC_ID=FITB8154.y2
Alignments
The following features are aligned
Feature Name Type LocationAnalysisReference
D10chromosomeD10:35290268..35290413 +Gossypium hirsutum (AD1) 'TM-1' genome UTX-JGI-Interim-release_v1.1n/a
CM018224.1chromosomeCM018224.1:33336813..33336958 +Gossypium barbadense (AD2) '3-79' genome HGS_v1.1n/a
D5_10chromosomeD5_10:29420116..29420262 +Gossypium raimondii (D5) 'D5-4' genome NSF_v1n/a
D10_10chromosomeD10_10:30291211..30291358 +Gossypium turneri (D10) genome NSF_v1_a2n/a
Dt_chr11chromosomeDt_chr11:30762407..30762552 -Gossypium hirsutum (AD1) 'TM-1' genome CGP-BGI_v1n/a
D10chromosomeD10:33945945..33946090 +Gossypium hirsutum (AD1) 'TM-1' genome NAU-NBI_v1.1n/a
Ghir_D10chromosomeGhir_D10:33884865..33885010 +Gossypium hirsutum (AD1) 'TM-1' genome HAU_v1 / v1.1n/a
D10chromosomeD10:32973301..32973446 +Gossypium hirsutum (AD1) 'TM-1' genome ZJU-improved_v2.1_a1n/a
D10chromosomeD10:33825510..33825655 +Gossypium hirsutum (AD1) 'TM-1' genome CRI_v1n/a
D10chromosomeD10:34047534..34047679 +Gossypium hirsutum (AD1) 'ZM24' genome CRI_v1n/a
Gbar_D10chromosomeGbar_D10:33217238..33217383 +Gossypium barbadense (AD2) '3-79' genome HAU_v2_a1n/a
D10chromosomeD10:33749935..33750080 +Gossypium barbadense (AD2) 'H7124' genome ZJU_v1.1_a1n/a
CM017632.1chromosomeCM017632.1:32889773..32889918 +Gossypium tomentosum (AD3) genome HGS_v1.1n/a
CM017658.1chromosomeCM017658.1:34350916..34351061 +Gossypium mustelinum (AD4) genome JGI_v1.1n/a
CM017710.1chromosomeCM017710.1:33909278..33909423 +Gossypium darwinii (AD5) genome HGS_v1.1n/a
D10chromosomeD10:34244418..34244563 +Gossypium hirsutum (AD1) 'TM-1' genome UTX_v2.1n/a
Chr10chromosomeChr10:33240667..33240813 -Gossypium raimondii (D5) 'Grai D502' genome HAU_v1n/a
Chr_11chromosomeChr_11:23255539..23255686 -Gossypium harknessii (D2-2) genome ISU_v1n/a
Chr11chromosomeChr11:34150184..34150331 -Gossypium davidsonii (D3d-8) genome CRI_v1n/a
Chr11chromosomeChr11:25238490..25238639 -Gossypium aridum (D4) genome ISU_v1n/a
Chr11chromosomeChr11:19545948..19546095 -Gossypium gossypioides (D6) genome ISU_v1n/a
Sequence
>PGML0803 ID=PGML0803; Name=PGML0803; organism=Gossypium raimondii; type=genetic_marker; length=148bp
TTGTTTCTCTTGTTTCGGTGGTAAAAAAAAGGGTAAGTGGAAGATGATGG
TTTTCATCATTTTTTTATTACTTTATTTAATTTAATTTACCATTTTTAAA
CTTAAAATGACCAAAAATCTCATACCATGCCAGAACAAATCGTCCACT