PGML0795, PGML0795 (genetic_marker) Gossypium raimondii

Marker Overview
NamePGML0795
Genbank IDN/A
TypeSSR
SpeciesGossypium raimondii
Repeat Motif(TAAA)3
Primer 1PGML0795_F: GCTGTCGCGTATCTTTCGTT
Primer 2PGML0795_R: TGCTTCTTGATACGTCCTGTTG
Product Length238
Publication[view all]
CommentBAC_ID=FITB1735.y2
Alignments
The following features are aligned
Feature Name Type LocationAnalysisReference
D03chromosomeD03:40976543..40976789 -Gossypium hirsutum (AD1) 'TM-1' genome UTX-JGI-Interim-release_v1.1n/a
CM018217.1chromosomeCM018217.1:41494944..41495193 -Gossypium barbadense (AD2) '3-79' genome HGS_v1.1n/a
D5_02chromosomeD5_02:35363676..35363913 -Gossypium raimondii (D5) 'D5-4' genome NSF_v1n/a
D10_02chromosomeD10_02:39871872..39872134 -Gossypium turneri (D10) genome NSF_v1_a2n/a
Dt_chr3chromosomeDt_chr3:10614521..10614767 +Gossypium hirsutum (AD1) 'TM-1' genome CGP-BGI_v1n/a
D03chromosomeD03:34935519..34935765 -Gossypium hirsutum (AD1) 'TM-1' genome NAU-NBI_v1.1n/a
Ghir_D03chromosomeGhir_D03:40884846..40885089 -Gossypium hirsutum (AD1) 'TM-1' genome HAU_v1 / v1.1n/a
D03chromosomeD03:42363549..42363795 -Gossypium hirsutum (AD1) 'TM-1' genome ZJU-improved_v2.1_a1n/a
D03chromosomeD03:41808133..41808379 -Gossypium hirsutum (AD1) 'TM-1' genome CRI_v1n/a
D03chromosomeD03:41261097..41261343 -Gossypium hirsutum (AD1) 'ZM24' genome CRI_v1n/a
Gbar_D03chromosomeGbar_D03:39910431..39910680 -Gossypium barbadense (AD2) '3-79' genome HAU_v2_a1n/a
D03chromosomeD03:42438117..42438366 -Gossypium barbadense (AD2) 'H7124' genome ZJU_v1.1_a1n/a
CM017625.1chromosomeCM017625.1:40836185..40836431 -Gossypium tomentosum (AD3) genome HGS_v1.1n/a
CM017651.1chromosomeCM017651.1:44810703..44810949 -Gossypium mustelinum (AD4) genome JGI_v1.1n/a
CM017703.1chromosomeCM017703.1:42425388..42425637 -Gossypium darwinii (AD5) genome HGS_v1.1n/a
D03chromosomeD03:42916860..42917106 -Gossypium hirsutum (AD1) 'TM-1' genome UTX_v2.1n/a
Chr02chromosomeChr02:37451665..37451902 -Gossypium raimondii (D5) 'Grai D502' genome HAU_v1n/a
Chr03chromosomeChr03:38814831..38815075 -Gossypium thurberi (D1-5) genome CRI_v1n/a
chr03chromosomechr03:25491561..25491823 -Gossypium armourianum (D2-1) genome ISU_v1n/a
Chr03_5106328chromosomeChr03_5106328:7612..7874 -Gossypium harknessii (D2-2) genome ISU_v1n/a
Chr03chromosomeChr03:22184796..22185008 -Gossypium aridum (D4) genome ISU_v1n/a
Sequence
>PGML0795 ID=PGML0795; Name=PGML0795; organism=Gossypium raimondii; type=genetic_marker; length=238bp
GCTGTCGCGTATCTTTCGTTAGACAACTAATTATTTATATCCATAATACA
TAAATAAATAAATATGTGGGAGAGTGAAATGTAGACAACCTCAGCATCTA
TTATAGTTTATGTCATTTACACGTTCTAATCCTCTTTTTGTAGTTTGATT
TATACTCCTAATATTATCATAAACTAATTGACTTCCCATTTTAATAAACA
GACATACAGTCGATAACAACAGGACGTATCAAGAAGCA