PGML0792, PGML0792 (genetic_marker) Gossypium raimondii

Marker Overview
NamePGML0792
Genbank IDN/A
TypeSSR
SpeciesGossypium raimondii
Repeat Motif(ATTT)4
Primer 1PGML0792_F: AAGTGGAAGAGCAACAGGGA
Primer 2PGML0792_R: CGATTTAGGTGCGCTCTTTC
Product Length265
Publication[view all]
CommentBAC_ID=FITB1781.y2
Alignments
The following features are aligned
Feature Name Type LocationAnalysisReference
D04chromosomeD04:54430798..54431059 -Gossypium hirsutum (AD1) 'TM-1' genome UTX-JGI-Interim-release_v1.1n/a
D5_04chromosomeD5_04:1846105..1846367 +Gossypium raimondii (D5) 'D5-4' genome NSF_v1n/a
D5_04chromosomeD5_04:1816556..1816820 -Gossypium raimondii (D5) 'D5-4' genome NSF_v1n/a
Dt_chr12chromosomeDt_chr12:4004403..4004664 +Gossypium hirsutum (AD1) 'TM-1' genome CGP-BGI_v1n/a
D04chromosomeD04:49365969..49366230 -Gossypium hirsutum (AD1) 'TM-1' genome NAU-NBI_v1.1n/a
Ghir_D04chromosomeGhir_D04:54213891..54214152 -Gossypium hirsutum (AD1) 'TM-1' genome HAU_v1 / v1.1n/a
D04chromosomeD04:54868169..54868430 -Gossypium hirsutum (AD1) 'TM-1' genome ZJU-improved_v2.1_a1n/a
D04chromosomeD04:54070894..54071155 -Gossypium hirsutum (AD1) 'TM-1' genome CRI_v1n/a
D04chromosomeD04:52082120..52082381 -Gossypium hirsutum (AD1) 'ZM24' genome CRI_v1n/a
CM017626.1chromosomeCM017626.1:52333546..52333809 +Gossypium tomentosum (AD3) genome HGS_v1.1n/a
CM017652.1chromosomeCM017652.1:55150357..55150616 -Gossypium mustelinum (AD4) genome JGI_v1.1n/a
D04chromosomeD04:55995363..55995624 -Gossypium hirsutum (AD1) 'TM-1' genome UTX_v2.1n/a
Chr04chromosomeChr04:1854452..1854715 +Gossypium raimondii (D5) 'Grai D502' genome HAU_v1n/a
Chr04chromosomeChr04:1824939..1825203 -Gossypium raimondii (D5) 'Grai D502' genome HAU_v1n/a
Chr12chromosomeChr12:26572317..26572946 +Gossypium aridum (D4) genome ISU_v1n/a
Chr12chromosomeChr12:25622177..25622999 +Gossypium lobatum (D7) genome ISU_v1n/a
Sequence
>PGML0792 ID=PGML0792; Name=PGML0792; organism=Gossypium raimondii; type=genetic_marker; length=265bp
AAGTGGAAGAGCAACAGGGACGATGGCAGAAACGAAAGCAAAAGAGCAGC
AAAAAAACGCAATGTAAACGGCTATAAAAGTCGAATCAAACAAATGTAAA
ATGAGAGATTTTTACGAGCATTCAGAAATATAAAAACAGAATAGAAGTTT
TAAAGGTTGATTTTTTACTGTTTCTTTTTATTTTTATTTATTTATTTATT
TTACAATTTCGTTTTAACGAAAATAGCAAAAAAAGAAAAGAAAAGGAAAG
AGCGCACCTAAATCG