PGML0791, PGML0791 (genetic_marker) Gossypium raimondii

Marker Overview
NamePGML0791
Genbank IDN/A
TypeSSR
SpeciesGossypium raimondii
Repeat Motif(ATTTT)5
Primer 1PGML0791_F: GCTGGAGGGTTTCGACATTA
Primer 2PGML0791_R: CTCAAATGGAATCGTGCTCA
Product Length219
Publication[view all]
CommentBAC_ID=FITB1773.y2
Alignments
The following features are aligned
Feature Name Type LocationAnalysisReference
D10chromosomeD10:18211884..18212102 +Gossypium hirsutum (AD1) 'TM-1' genome UTX-JGI-Interim-release_v1.1n/a
CM018224.1chromosomeCM018224.1:16946354..16946572 +Gossypium barbadense (AD2) '3-79' genome HGS_v1.1n/a
D5_10chromosomeD5_10:45344367..45344585 -Gossypium raimondii (D5) 'D5-4' genome NSF_v1n/a
D10_10chromosomeD10_10:47382652..47382871 -Gossypium turneri (D10) genome NSF_v1_a2n/a
At_chr6chromosomeAt_chr6:4071516..4071734 -Gossypium hirsutum (AD1) 'TM-1' genome CGP-BGI_v1n/a
D10chromosomeD10:16963075..16963293 +Gossypium hirsutum (AD1) 'TM-1' genome NAU-NBI_v1.1n/a
Ghir_D10chromosomeGhir_D10:17402069..17402286 +Gossypium hirsutum (AD1) 'TM-1' genome HAU_v1 / v1.1n/a
D10chromosomeD10:16950728..16950946 +Gossypium hirsutum (AD1) 'TM-1' genome ZJU-improved_v2.1_a1n/a
D10chromosomeD10:17558440..17558658 +Gossypium hirsutum (AD1) 'TM-1' genome CRI_v1n/a
D10chromosomeD10:17512170..17512388 +Gossypium hirsutum (AD1) 'ZM24' genome CRI_v1n/a
Gbar_D10chromosomeGbar_D10:16769726..16769944 +Gossypium barbadense (AD2) '3-79' genome HAU_v2_a1n/a
D10chromosomeD10:17282255..17282473 +Gossypium barbadense (AD2) 'H7124' genome ZJU_v1.1_a1n/a
CM017632.1chromosomeCM017632.1:17157318..17157536 +Gossypium tomentosum (AD3) genome HGS_v1.1n/a
CM017658.1chromosomeCM017658.1:17456404..17456622 +Gossypium mustelinum (AD4) genome JGI_v1.1n/a
CM017710.1chromosomeCM017710.1:17311565..17311783 +Gossypium darwinii (AD5) genome HGS_v1.1n/a
D10chromosomeD10:17649955..17650173 +Gossypium hirsutum (AD1) 'TM-1' genome UTX_v2.1n/a
Chr10chromosomeChr10:16796690..16796908 +Gossypium raimondii (D5) 'Grai D502' genome HAU_v1n/a
Chr11chromosomeChr11:17084551..17084770 +Gossypium thurberi (D1-5) genome CRI_v1n/a
chr11chromosomechr11:14872798..14873016 +Gossypium armourianum (D2-1) genome ISU_v1n/a
Chr_11chromosomeChr_11:12483341..12483560 +Gossypium harknessii (D2-2) genome ISU_v1n/a
Chr11chromosomeChr11:17240295..17240513 +Gossypium davidsonii (D3d-8) genome CRI_v1n/a
Chr11chromosomeChr11:13577855..13578073 +Gossypium lobatum (D7) genome ISU_v1n/a
Sequence
>PGML0791 ID=PGML0791; Name=PGML0791; organism=Gossypium raimondii; type=genetic_marker; length=219bp
GCTGGAGGGTTTCGACATTAAATCTTGAAAATAAAATTTTTACGATCAAT
AAGATAAGTAGAAACATTAGGACTTATAAATAATTTTATTTTATTTTATT
TATTTTGTTGTTAGTAGATTTAGACTATTATAACAACTCTGATGGGGAAA
ACTATATTCGACACAAATTGGCTAAAACCCAACATTACTCGACCTGTTAT
GAGCACGATTCCATTTGAG