PGML0778, PGML0778 (genetic_marker) Gossypium raimondii

Marker Overview
NamePGML0778
Genbank IDN/A
TypeSSR
SpeciesGossypium raimondii
Repeat Motif(TTTATT)3
Primer 1PGML0778_F: CTTCGGGTGACGTATCCACT
Primer 2PGML0778_R: AAAGTAATTATTGTAAGAGCCCAATTT
Product Length243
Publication[view all]
CommentBAC_ID=FITB1745.y2
Alignments
The following features are aligned
Feature Name Type LocationAnalysisReference
D08chromosomeD08:10839748..10839981 +Gossypium hirsutum (AD1) 'TM-1' genome UTX-JGI-Interim-release_v1.1n/a
CM018222.1chromosomeCM018222.1:10232015..10232257 +Gossypium barbadense (AD2) '3-79' genome HGS_v1.1n/a
D5_08chromosomeD5_08:9845482..9845722 +Gossypium raimondii (D5) 'D5-4' genome NSF_v1n/a
D10_08chromosomeD10_08:52392790..52393016 -Gossypium turneri (D10) genome NSF_v1_a2n/a
Dt_chr4chromosomeDt_chr4:26871443..26871676 -Gossypium hirsutum (AD1) 'TM-1' genome CGP-BGI_v1n/a
D08chromosomeD08:10213742..10213975 +Gossypium hirsutum (AD1) 'TM-1' genome NAU-NBI_v1.1n/a
Ghir_D08chromosomeGhir_D08:10256272..10256505 +Gossypium hirsutum (AD1) 'TM-1' genome HAU_v1 / v1.1n/a
D08chromosomeD08:9845368..9845601 +Gossypium hirsutum (AD1) 'TM-1' genome ZJU-improved_v2.1_a1n/a
D08chromosomeD08:9701642..9701875 +Gossypium hirsutum (AD1) 'TM-1' genome CRI_v1n/a
D08chromosomeD08:10339639..10339872 +Gossypium hirsutum (AD1) 'ZM24' genome CRI_v1n/a
Gbar_D08chromosomeGbar_D08:10370098..10370340 +Gossypium barbadense (AD2) '3-79' genome HAU_v2_a1n/a
D08chromosomeD08:10429697..10429939 +Gossypium barbadense (AD2) 'H7124' genome ZJU_v1.1_a1n/a
CM017630.1chromosomeCM017630.1:10482800..10483037 +Gossypium tomentosum (AD3) genome HGS_v1.1n/a
CM017656.1chromosomeCM017656.1:10880228..10880458 +Gossypium mustelinum (AD4) genome JGI_v1.1n/a
CM017708.1chromosomeCM017708.1:10303259..10303501 +Gossypium darwinii (AD5) genome HGS_v1.1n/a
D08chromosomeD08:10442188..10442421 +Gossypium hirsutum (AD1) 'TM-1' genome UTX_v2.1n/a
chr04chromosomechr04:8873724..8873950 +Gossypium armourianum (D2-1) genome ISU_v1n/a
Chr_04chromosomeChr_04:8061324..8061550 +Gossypium harknessii (D2-2) genome ISU_v1n/a
Chr04chromosomeChr04:10053841..10054076 +Gossypium davidsonii (D3d-8) genome CRI_v1n/a
Sequence
>PGML0778 ID=PGML0778; Name=PGML0778; organism=Gossypium raimondii; type=genetic_marker; length=243bp
CTTCGGGTGACGTATCCACTGACATGGCCAGGAGCAGCGACACTTAGGGG
ATAGAGGTGACTAGGGTTTCTGGAAATTTTTTAAGATAGCGGGCTTTGGG
TTTTAATTTTTTTATTTTAGGATTTTTTGTATTTGGGCCATTATTTTTTT
GTAAATAAATTTTAATAATAGACTTTTATTTTTATTTTTATTTGTTTGTT
TTTGTTGGGCCAGATAAAATTGGGCTCTTACAATAATTACTTT